RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 COX7BP24311 80 aa11.71□□□□□ -0.54
PCF11-207ENST00000624931 FBN3Q75N90 2809 aa11.7□□□□□ -0.54
PCF11-207ENST00000624931 TRBV7-4A0A0J9YYF1 115 aa11.69□□□□□ -0.54
PCF11-207ENST00000624931 HAMPP81172 84 aa11.69□□□□□ -0.54
PCF11-207ENST00000624931 C20orf197Q8N268 126 aa11.69□□□□□ -0.54
PCF11-207ENST00000624931 FAM236DA0A1B0GTK5 79 aa11.68□□□□□ -0.54
PCF11-207ENST00000624931 ZNF73O43830 326 aaPredicted RBP11.68□□□□□ -0.54
PCF11-207ENST00000624931 FAM236CP0DP71 79 aa11.68□□□□□ -0.54
PCF11-207ENST00000624931 ELOF1P60002 83 aaKnown RBP11.68□□□□□ -0.54
PCF11-207ENST00000624931 KLKP1Q107X0 134 aa11.68□□□□□ -0.54
PCF11-207ENST00000624931 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
PCF11-207ENST00000624931 F8WDY8 70 aa11.66□□□□□ -0.54
PCF11-207ENST00000624931 NDUFC1O43677 76 aa11.66□□□□□ -0.54
PCF11-207ENST00000624931 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
PCF11-207ENST00000624931 LINC00588Q9Y4M8 146 aa11.66□□□□□ -0.54
PCF11-207ENST00000624931 M0R378 163 aa11.65□□□□□ -0.54
PCF11-207ENST00000624931 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.54
PCF11-207ENST00000624931 EPM2AB3EWF7 344 aa11.62□□□□□ -0.55
PCF11-207ENST00000624931 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
PCF11-207ENST00000624931 H7BZZ5 65 aa11.61□□□□□ -0.55
PCF11-207ENST00000624931 APLNQ9ULZ1 77 aa11.61□□□□□ -0.55
PCF11-207ENST00000624931 M0R2N4 97 aa11.6□□□□□ -0.55
PCF11-207ENST00000624931 OXTP01178 125 aa11.6□□□□□ -0.55
PCF11-207ENST00000624931 VPREB1P12018 145 aa11.6□□□□□ -0.55
PCF11-207ENST00000624931 ATP5EP56381 51 aaPredicted RBP11.6□□□□□ -0.55
PCF11-207ENST00000624931 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
PCF11-207ENST00000624931 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
PCF11-207ENST00000624931 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
PCF11-207ENST00000624931 XAGE1AQ9HD64 81 aa11.57□□□□□ -0.56
PCF11-207ENST00000624931 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
PCF11-207ENST00000624931 Q5XG85 94 aa11.57□□□□□ -0.56
PCF11-207ENST00000624931 DNAH7Q8WXX0 4024 aa11.57□□□□□ -0.56
PCF11-207ENST00000624931 CSMD3Q7Z407 3707 aa11.56□□□□□ -0.56
PCF11-207ENST00000624931 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
PCF11-207ENST00000624931 A0A1B0GW54 56 aa11.55□□□□□ -0.56
PCF11-207ENST00000624931 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
PCF11-207ENST00000624931 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.57
PCF11-207ENST00000624931 UBE2DNLQ8IWF7 75 aa11.52□□□□□ -0.57
PCF11-207ENST00000624931 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
PCF11-207ENST00000624931 TGP01266 2768 aa11.5□□□□□ -0.57
PCF11-207ENST00000624931 PLECQ15149 4684 aaKnown RBP11.5□□□□□ -0.57
PCF11-207ENST00000624931 SMIM26A0A096LP01 95 aa11.49□□□□□ -0.57
PCF11-207ENST00000624931 NREPQ16612 68 aa11.49□□□□□ -0.57
PCF11-207ENST00000624931 C4orf26Q17RF5 130 aa11.49□□□□□ -0.57
PCF11-207ENST00000624931 BPY2O14599 106 aa11.49□□□□□ -0.57
PCF11-207ENST00000624931 Q6ZRU5 148 aa11.49□□□□□ -0.57
PCF11-207ENST00000624931 F8WEM9 126 aa11.48□□□□□ -0.57
PCF11-207ENST00000624931 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
PCF11-207ENST00000624931 RMI2Q96E14 147 aa11.47□□□□□ -0.57
PCF11-207ENST00000624931 KRTAP1-5Q9BYS1 174 aa11.47□□□□□ -0.57
PCF11-207ENST00000624931 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
PCF11-207ENST00000624931 LYSTQ99698 3801 aa11.46□□□□□ -0.57
PCF11-207ENST00000624931 C15orf56Q8N910 161 aa11.46□□□□□ -0.58
PCF11-207ENST00000624931 SNURFQ9Y675 71 aa11.46□□□□□ -0.58
PCF11-207ENST00000624931 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
PCF11-207ENST00000624931 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
PCF11-207ENST00000624931 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
PCF11-207ENST00000624931 HRCT1Q6UXD1 115 aa11.44□□□□□ -0.58
PCF11-207ENST00000624931 SCXQ7RTU7 201 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 DHRS4-AS1Q9P1J3 65 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 PLA2G2DQ9UNK4 145 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 IGLV5-48A0A075B6I7 105 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 DNAH1Q9P2D7 4330 aa11.43□□□□□ -0.58
PCF11-207ENST00000624931 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
PCF11-207ENST00000624931 CASC10Q5T4H9 136 aa11.42□□□□□ -0.58
PCF11-207ENST00000624931 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
PCF11-207ENST00000624931 WWC2-AS2Q96NR7 200 aa11.41□□□□□ -0.58
PCF11-207ENST00000624931 TLX1NBP0CAT3 122 aa11.4□□□□□ -0.58
PCF11-207ENST00000624931 Q6ZRP5 223 aa11.4□□□□□ -0.58
PCF11-207ENST00000624931 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCF11-207ENST00000624931 OCR1Q9BZK8 76 aa11.38□□□□□ -0.59
PCF11-207ENST00000624931 VPS13DQ5THJ4 4388 aa11.38□□□□□ -0.59
PCF11-207ENST00000624931 PRYO14603 147 aa11.37□□□□□ -0.59
PCF11-207ENST00000624931 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
PCF11-207ENST00000624931 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
PCF11-207ENST00000624931 Q8N377 158 aa11.36□□□□□ -0.59
PCF11-207ENST00000624931 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
PCF11-207ENST00000624931 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
PCF11-207ENST00000624931 Q6ZRX8 168 aa11.32□□□□□ -0.6
PCF11-207ENST00000624931 PRO0628Q9UI54 55 aa11.31□□□□□ -0.6
PCF11-207ENST00000624931 SPRR1AP35321 89 aa11.3□□□□□ -0.6
PCF11-207ENST00000624931 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
PCF11-207ENST00000624931 DEFB105AQ8NG35 78 aa11.29□□□□□ -0.6
PCF11-207ENST00000624931 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
PCF11-207ENST00000624931 C3orf84H3BNL1 204 aa11.29□□□□□ -0.6
PCF11-207ENST00000624931 TNP2Q05952 138 aa11.29□□□□□ -0.6
PCF11-207ENST00000624931 Q8N9L7 120 aa11.29□□□□□ -0.6
PCF11-207ENST00000624931 LY6G6CO95867 125 aa11.28□□□□□ -0.6
PCF11-207ENST00000624931 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
PCF11-207ENST00000624931 IGLV1-50A0A075B6I6 118 aa11.27□□□□□ -0.61
PCF11-207ENST00000624931 KRTAP4-16G5E9R7 235 aaPredicted RBP11.27□□□□□ -0.61
PCF11-207ENST00000624931 Q8NBF4 154 aa11.27□□□□□ -0.61
PCF11-207ENST00000624931 SPRR4Q96PI1 79 aa11.27□□□□□ -0.61
PCF11-207ENST00000624931 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.61
PCF11-207ENST00000624931 LCE6AA0A183 80 aa11.26□□□□□ -0.61
PCF11-207ENST00000624931 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
PCF11-207ENST00000624931 A0A1W2PNM2 257 aa11.25□□□□□ -0.61
PCF11-207ENST00000624931 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms