RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CXCL6P80162 114 aa10.41□□□□□ -0.74
NPHP4-211ENST00000622020 OXLD1Q5BKU9 147 aa10.4□□□□□ -0.74
NPHP4-211ENST00000622020 FP248Q71RG6 208 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-211ENST00000622020 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
NPHP4-211ENST00000622020 M0R378 163 aa10.39□□□□□ -0.75
NPHP4-211ENST00000622020 C1orf43Q9BWL3 253 aa10.39□□□□□ -0.75
NPHP4-211ENST00000622020 RPL37AP8A6NKH3 93 aa10.39□□□□□ -0.75
NPHP4-211ENST00000622020 FBN1P35555 2871 aaKnown RBP10.38□□□□□ -0.75
NPHP4-211ENST00000622020 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
NPHP4-211ENST00000622020 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
NPHP4-211ENST00000622020 ESRGQ1W209 222 aa10.38□□□□□ -0.75
NPHP4-211ENST00000622020 STAB1Q9NY15 2570 aa10.37□□□□□ -0.75
NPHP4-211ENST00000622020 NREPQ16612 68 aa10.37□□□□□ -0.75
NPHP4-211ENST00000622020 KLKP1Q107X0 134 aa10.37□□□□□ -0.75
NPHP4-211ENST00000622020 EPM2AB3EWF7 344 aa10.36□□□□□ -0.75
NPHP4-211ENST00000622020 EGFEM1PQ0D2K5 195 aa10.36□□□□□ -0.75
NPHP4-211ENST00000622020 MRAPQ8TCY5 172 aa10.36□□□□□ -0.75
NPHP4-211ENST00000622020 ANK2Q01484 3957 aa10.36□□□□□ -0.75
NPHP4-211ENST00000622020 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
NPHP4-211ENST00000622020 KRTAP26-1Q6PEX3 210 aa10.35□□□□□ -0.75
NPHP4-211ENST00000622020 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
NPHP4-211ENST00000622020 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
NPHP4-211ENST00000622020 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
NPHP4-211ENST00000622020 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
NPHP4-211ENST00000622020 SYCNQ0VAF6 134 aa10.31□□□□□ -0.76
NPHP4-211ENST00000622020 TMEM254Q8TBM7 123 aa10.31□□□□□ -0.76
NPHP4-211ENST00000622020 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
NPHP4-211ENST00000622020 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
NPHP4-211ENST00000622020 H3BQ85 93 aa10.3□□□□□ -0.76
NPHP4-211ENST00000622020 IGKV4-1P06312 121 aa10.3□□□□□ -0.76
NPHP4-211ENST00000622020 Q8N377 158 aa10.3□□□□□ -0.76
NPHP4-211ENST00000622020 MPLKIPQ8TAP9 179 aa10.3□□□□□ -0.76
NPHP4-211ENST00000622020 A0A0U1RQV1 116 aa10.29□□□□□ -0.76
NPHP4-211ENST00000622020 ST20-AS1Q8NBB2 130 aa10.29□□□□□ -0.76
NPHP4-211ENST00000622020 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
NPHP4-211ENST00000622020 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
NPHP4-211ENST00000622020 COL6A5A8TX70 2615 aa10.28□□□□□ -0.76
NPHP4-211ENST00000622020 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
NPHP4-211ENST00000622020 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
NPHP4-211ENST00000622020 HIGD2AQ9BW72 106 aa10.27□□□□□ -0.77
NPHP4-211ENST00000622020 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
NPHP4-211ENST00000622020 BCE1O60756 84 aa10.27□□□□□ -0.77
NPHP4-211ENST00000622020 CASC10Q5T4H9 136 aa10.27□□□□□ -0.77
NPHP4-211ENST00000622020 KRTAP10-11P60412 298 aa10.26□□□□□ -0.77
NPHP4-211ENST00000622020 CSMD3Q7Z407 3707 aa10.26□□□□□ -0.77
NPHP4-211ENST00000622020 DEFB131BA0A096LNP1 70 aa10.25□□□□□ -0.77
NPHP4-211ENST00000622020 SMIM29Q86T20 159 aa10.23□□□□□ -0.77
NPHP4-211ENST00000622020 Q9BRP9 147 aa10.23□□□□□ -0.77
NPHP4-211ENST00000622020 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
NPHP4-211ENST00000622020 ETDCA0A1B0GVM5 59 aa10.21□□□□□ -0.78
NPHP4-211ENST00000622020 A0A1W2PNM2 257 aa10.21□□□□□ -0.78
NPHP4-211ENST00000622020 ERC2-IT1O76042 136 aa10.21□□□□□ -0.78
NPHP4-211ENST00000622020 OCR1Q9BZK8 76 aa10.21□□□□□ -0.78
NPHP4-211ENST00000622020 LRCOL1A6NCL2 159 aa10.2□□□□□ -0.78
NPHP4-211ENST00000622020 PRB2P02812 416 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-211ENST00000622020 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPHP4-211ENST00000622020 DEFB116Q30KQ4 102 aa10.2□□□□□ -0.78
NPHP4-211ENST00000622020 SRRM2Q9UQ35 2752 aaKnown RBP10.2□□□□□ -0.78
NPHP4-211ENST00000622020 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
NPHP4-211ENST00000622020 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
NPHP4-211ENST00000622020 C11orf45Q8TAV5 145 aa10.2□□□□□ -0.78
NPHP4-211ENST00000622020 PRYO14603 147 aa10.19□□□□□ -0.78
NPHP4-211ENST00000622020 UBE2BP63146 152 aa10.19□□□□□ -0.78
NPHP4-211ENST00000622020 NDUFC1O43677 76 aa10.18□□□□□ -0.78
NPHP4-211ENST00000622020 LINC01556Q5JQF7 62 aa10.18□□□□□ -0.78
NPHP4-211ENST00000622020 Q6ZRX8 168 aa10.18□□□□□ -0.78
NPHP4-211ENST00000622020 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
NPHP4-211ENST00000622020 PRR4Q16378 134 aa10.15□□□□□ -0.78
NPHP4-211ENST00000622020 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
NPHP4-211ENST00000622020 H3BNG1 76 aa10.15□□□□□ -0.79
NPHP4-211ENST00000622020 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
NPHP4-211ENST00000622020 K7EQZ3 153 aa10.13□□□□□ -0.79
NPHP4-211ENST00000622020 DHRS4-AS1Q9P1J3 65 aa10.12□□□□□ -0.79
NPHP4-211ENST00000622020 IGKV2-24A0A0C4DH68 120 aa10.11□□□□□ -0.79
NPHP4-211ENST00000622020 ATP5EP56381 51 aaPredicted RBP10.11□□□□□ -0.79
NPHP4-211ENST00000622020 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
NPHP4-211ENST00000622020 KRTAP4-16G5E9R7 235 aaPredicted RBP10.09□□□□□ -0.79
NPHP4-211ENST00000622020 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
NPHP4-211ENST00000622020 C1orf195Q5TG92 126 aa10.09□□□□□ -0.79
NPHP4-211ENST00000622020 Q8NBF4 154 aa10.09□□□□□ -0.79
NPHP4-211ENST00000622020 DSCR10P59022 87 aa10.09□□□□□ -0.79
NPHP4-211ENST00000622020 PRLHP81277 87 aa10.09□□□□□ -0.79
NPHP4-211ENST00000622020 LYSTQ99698 3801 aa10.08□□□□□ -0.8
NPHP4-211ENST00000622020 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
NPHP4-211ENST00000622020 TNP2Q05952 138 aa10.06□□□□□ -0.8
NPHP4-211ENST00000622020 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
NPHP4-211ENST00000622020 TENM2Q9NT68 2774 aa10.05□□□□□ -0.8
NPHP4-211ENST00000622020 LINC00476Q8WZB0 136 aa10.05□□□□□ -0.8
NPHP4-211ENST00000622020 DNAH10Q8IVF4 4471 aa10.04□□□□□ -0.8
NPHP4-211ENST00000622020 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
NPHP4-211ENST00000622020 SPRR1AP35321 89 aa10.03□□□□□ -0.8
NPHP4-211ENST00000622020 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
NPHP4-211ENST00000622020 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
NPHP4-211ENST00000622020 COL7A1Q02388 2944 aa10.02□□□□□ -0.8
NPHP4-211ENST00000622020 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
NPHP4-211ENST00000622020 A0A087WSZ3 146 aa10.01□□□□□ -0.81
NPHP4-211ENST00000622020 PSCAO43653 123 aa10.01□□□□□ -0.81
NPHP4-211ENST00000622020 A0A096LNI7 61 aa10.01□□□□□ -0.81
NPHP4-211ENST00000622020 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
NPHP4-211ENST00000622020 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms