RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB3-202ENST00000618934 TMEM258P61165 79 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 H3BQ85 93 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 LINC00588Q9Y4M8 146 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 LYSTQ99698 3801 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 PDE6GP18545 87 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 FAM168BA1KXE4 195 aa12.52□□□□□ -0.4
PCDHGB3-202ENST00000618934 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.4
PCDHGB3-202ENST00000618934 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
PCDHGB3-202ENST00000618934 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
PCDHGB3-202ENST00000618934 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 OXTP01178 125 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 F8WDY8 70 aa12.47□□□□□ -0.41
PCDHGB3-202ENST00000618934 C20orf197Q8N268 126 aa12.45□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q8N377 158 aa12.45□□□□□ -0.42
PCDHGB3-202ENST00000618934 CXCL6P80162 114 aa12.44□□□□□ -0.42
PCDHGB3-202ENST00000618934 TLX1NBP0CAT3 122 aa12.43□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q9BRP9 147 aa12.42□□□□□ -0.42
PCDHGB3-202ENST00000618934 COL7A1Q02388 2944 aa12.42□□□□□ -0.42
PCDHGB3-202ENST00000618934 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB3-202ENST00000618934 K7EIL1 84 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q8N9L7 120 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 TM2D3Q9BRN9 247 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
PCDHGB3-202ENST00000618934 MGAM2Q2M2H8 2515 aa12.39□□□□□ -0.43
PCDHGB3-202ENST00000618934 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 ST20-AS1Q8NBB2 130 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 Q6ZRX8 168 aa12.37□□□□□ -0.43
PCDHGB3-202ENST00000618934 TRAV7A0A075B6U4 112 aa12.37□□□□□ -0.43
PCDHGB3-202ENST00000618934 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
PCDHGB3-202ENST00000618934 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
PCDHGB3-202ENST00000618934 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
PCDHGB3-202ENST00000618934 SPRR1AP35321 89 aa12.34□□□□□ -0.43
PCDHGB3-202ENST00000618934 BCE1O60756 84 aa12.33□□□□□ -0.44
PCDHGB3-202ENST00000618934 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 H7BZZ5 65 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 ETDCA0A1B0GVM5 59 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 PRYO14603 147 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 NREPQ16612 68 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 BPY2O14599 106 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 CSMD3Q7Z407 3707 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 SNURFQ9Y675 71 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 C4orf26Q17RF5 130 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 Q5XG85 94 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 A0A1W2PNM2 257 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 FAM236DA0A1B0GTK5 79 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 FAM236CP0DP71 79 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 RMI2Q96E14 147 aa12.28□□□□□ -0.44
PCDHGB3-202ENST00000618934 TNP2Q05952 138 aa12.27□□□□□ -0.44
PCDHGB3-202ENST00000618934 KLKP1Q107X0 134 aa12.27□□□□□ -0.45
PCDHGB3-202ENST00000618934 SRRM2Q9UQ35 2752 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-202ENST00000618934 UBE2BP63146 152 aa12.24□□□□□ -0.45
PCDHGB3-202ENST00000618934 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A096LNI7 61 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A0G2JQZ4 141 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A1W2PNN7 141 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 IGKV2-24A0A0C4DH68 120 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 HRCT1Q6UXD1 115 aa12.21□□□□□ -0.45
PCDHGB3-202ENST00000618934 REG3GQ6UW15 175 aa12.21□□□□□ -0.46
PCDHGB3-202ENST00000618934 F8WEM9 126 aa12.2□□□□□ -0.46
PCDHGB3-202ENST00000618934 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 SERP1Q9Y6X1 66 aa12.18□□□□□ -0.46
PCDHGB3-202ENST00000618934 DYNC2H1Q8NCM8 4307 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-202ENST00000618934 Q8NBF4 154 aa12.17□□□□□ -0.46
PCDHGB3-202ENST00000618934 PRLHP81277 87 aa12.16□□□□□ -0.46
PCDHGB3-202ENST00000618934 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB3-202ENST00000618934 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-202ENST00000618934 OCR1Q9BZK8 76 aa12.15□□□□□ -0.47
PCDHGB3-202ENST00000618934 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 PSCAO43653 123 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 CHTF8P0CG12 524 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
PCDHGB3-202ENST00000618934 TMEM254Q8TBM7 123 aa12.11□□□□□ -0.47
PCDHGB3-202ENST00000618934 APLNQ9ULZ1 77 aa12.1□□□□□ -0.47
PCDHGB3-202ENST00000618934 DSCR10P59022 87 aa12.1□□□□□ -0.47
PCDHGB3-202ENST00000618934 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
PCDHGB3-202ENST00000618934 A0A1B0GW54 56 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms