RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 DEFB131BA0A096LNP1 70 aa11.03□□□□□ -0.64
CNOT3-208ENST00000613073 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
CNOT3-208ENST00000613073 ESRGQ1W209 222 aa11.02□□□□□ -0.65
CNOT3-208ENST00000613073 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
CNOT3-208ENST00000613073 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 Q6ZQY7 126 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 H3BNG1 76 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 SPAG11BQ08648 103 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 UNQ6190/PRO20217Q6UXQ8 127 aa11.01□□□□□ -0.65
CNOT3-208ENST00000613073 Q8N9L7 120 aa11□□□□□ -0.65
CNOT3-208ENST00000613073 TRBV7-4A0A0J9YYF1 115 aa10.97□□□□□ -0.65
CNOT3-208ENST00000613073 NREPQ16612 68 aa10.97□□□□□ -0.65
CNOT3-208ENST00000613073 HUWE1Q7Z6Z7 4374 aaKnown RBP10.97□□□□□ -0.65
CNOT3-208ENST00000613073 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
CNOT3-208ENST00000613073 K7EIL1 84 aa10.96□□□□□ -0.65
CNOT3-208ENST00000613073 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
CNOT3-208ENST00000613073 BCE1O60756 84 aa10.95□□□□□ -0.66
CNOT3-208ENST00000613073 COX17Q14061 63 aa10.95□□□□□ -0.66
CNOT3-208ENST00000613073 TMEM254Q8TBM7 123 aa10.95□□□□□ -0.66
CNOT3-208ENST00000613073 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
CNOT3-208ENST00000613073 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
CNOT3-208ENST00000613073 CXCL6P80162 114 aa10.93□□□□□ -0.66
CNOT3-208ENST00000613073 BPY2O14599 106 aa10.93□□□□□ -0.66
CNOT3-208ENST00000613073 NDUFC1O43677 76 aa10.91□□□□□ -0.66
CNOT3-208ENST00000613073 COL7A1Q02388 2944 aa10.91□□□□□ -0.66
CNOT3-208ENST00000613073 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.9□□□□□ -0.66
CNOT3-208ENST00000613073 LRCOL1A6NCL2 159 aa10.89□□□□□ -0.67
CNOT3-208ENST00000613073 KRTAP26-1Q6PEX3 210 aa10.89□□□□□ -0.67
CNOT3-208ENST00000613073 C6orf48Q9UBA6 75 aa10.89□□□□□ -0.67
CNOT3-208ENST00000613073 IGKV2D-24A0A075B6R9 120 aa10.88□□□□□ -0.67
CNOT3-208ENST00000613073 STAB2Q8WWQ8 2551 aa10.88□□□□□ -0.67
CNOT3-208ENST00000613073 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
CNOT3-208ENST00000613073 LINC01556Q5JQF7 62 aa10.87□□□□□ -0.67
CNOT3-208ENST00000613073 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
CNOT3-208ENST00000613073 LYSTQ99698 3801 aa10.86□□□□□ -0.67
CNOT3-208ENST00000613073 MDFIQ99750 246 aa10.86□□□□□ -0.67
CNOT3-208ENST00000613073 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
CNOT3-208ENST00000613073 ATP5EP56381 51 aaPredicted RBP10.85□□□□□ -0.67
CNOT3-208ENST00000613073 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
CNOT3-208ENST00000613073 PRYO14603 147 aa10.85□□□□□ -0.67
CNOT3-208ENST00000613073 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
CNOT3-208ENST00000613073 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
CNOT3-208ENST00000613073 PDE6GP18545 87 aa10.83□□□□□ -0.68
CNOT3-208ENST00000613073 Q6ZRU5 148 aa10.83□□□□□ -0.68
CNOT3-208ENST00000613073 GVQW2A0A096LPI5 108 aaPredicted RBP10.82□□□□□ -0.68
CNOT3-208ENST00000613073 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
CNOT3-208ENST00000613073 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
CNOT3-208ENST00000613073 DNAH10OSP0CZ25 163 aa10.81□□□□□ -0.68
CNOT3-208ENST00000613073 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
CNOT3-208ENST00000613073 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
CNOT3-208ENST00000613073 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
CNOT3-208ENST00000613073 OCR1Q9BZK8 76 aa10.78□□□□□ -0.68
CNOT3-208ENST00000613073 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
CNOT3-208ENST00000613073 ZNF73O43830 326 aaPredicted RBP10.77□□□□□ -0.69
CNOT3-208ENST00000613073 COX7BP24311 80 aa10.77□□□□□ -0.69
CNOT3-208ENST00000613073 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
CNOT3-208ENST00000613073 CASC10Q5T4H9 136 aa10.76□□□□□ -0.69
CNOT3-208ENST00000613073 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
CNOT3-208ENST00000613073 Q6ZRP5 223 aa10.73□□□□□ -0.69
CNOT3-208ENST00000613073 SYCNQ0VAF6 134 aa10.73□□□□□ -0.69
CNOT3-208ENST00000613073 PRR4Q16378 134 aa10.73□□□□□ -0.69
CNOT3-208ENST00000613073 PSPHP1O15172 72 aa10.72□□□□□ -0.69
CNOT3-208ENST00000613073 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
CNOT3-208ENST00000613073 SMIM29Q86T20 159 aa10.71□□□□□ -0.69
CNOT3-208ENST00000613073 DNAH10Q8IVF4 4471 aa10.71□□□□□ -0.7
CNOT3-208ENST00000613073 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.7
CNOT3-208ENST00000613073 CSMD3Q7Z407 3707 aa10.7□□□□□ -0.7
CNOT3-208ENST00000613073 VPREB1P12018 145 aa10.7□□□□□ -0.7
CNOT3-208ENST00000613073 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
CNOT3-208ENST00000613073 DNAH7Q8WXX0 4024 aa10.67□□□□□ -0.7
CNOT3-208ENST00000613073 H3BQ85 93 aa10.66□□□□□ -0.7
CNOT3-208ENST00000613073 hDV103S1A0JD37 113 aa10.66□□□□□ -0.7
CNOT3-208ENST00000613073 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
CNOT3-208ENST00000613073 PMAIP1Q13794 54 aa10.65□□□□□ -0.71
CNOT3-208ENST00000613073 M0R378 163 aa10.64□□□□□ -0.71
CNOT3-208ENST00000613073 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
CNOT3-208ENST00000613073 SERTAD4-AS1Q5TG53 156 aa10.62□□□□□ -0.71
CNOT3-208ENST00000613073 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
CNOT3-208ENST00000613073 PLECQ15149 4684 aaKnown RBP10.61□□□□□ -0.71
CNOT3-208ENST00000613073 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
CNOT3-208ENST00000613073 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
CNOT3-208ENST00000613073 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
CNOT3-208ENST00000613073 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
CNOT3-208ENST00000613073 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
CNOT3-208ENST00000613073 A8MU10 97 aa10.6□□□□□ -0.71
CNOT3-208ENST00000613073 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
CNOT3-208ENST00000613073 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
CNOT3-208ENST00000613073 DNHD1Q96M86 4753 aa10.58□□□□□ -0.72
CNOT3-208ENST00000613073 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
CNOT3-208ENST00000613073 TRAV22A0A0B4J277 110 aa10.57□□□□□ -0.72
CNOT3-208ENST00000613073 C7orf33Q8WU49 177 aa10.56□□□□□ -0.72
CNOT3-208ENST00000613073 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
CNOT3-208ENST00000613073 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
CNOT3-208ENST00000613073 PSCAO43653 123 aa10.54□□□□□ -0.72
CNOT3-208ENST00000613073 Q1T7F1 81 aa10.54□□□□□ -0.72
CNOT3-208ENST00000613073 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
CNOT3-208ENST00000613073 A8MUN3 132 aa10.54□□□□□ -0.72
CNOT3-208ENST00000613073 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
CNOT3-208ENST00000613073 Q8N377 158 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms