RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.38
SEMA3B-210ENST00000611067 ELOF1P60002 83 aaKnown RBP12.71□□□□□ -0.38
SEMA3B-210ENST00000611067 SCXQ7RTU7 201 aa12.71□□□□□ -0.38
SEMA3B-210ENST00000611067 SMIM26A0A096LP01 95 aa12.7□□□□□ -0.38
SEMA3B-210ENST00000611067 PRR34Q9NV39 138 aa12.69□□□□□ -0.38
SEMA3B-210ENST00000611067 C6orf48Q9UBA6 75 aa12.69□□□□□ -0.38
SEMA3B-210ENST00000611067 ATP5EP56381 51 aaPredicted RBP12.68□□□□□ -0.38
SEMA3B-210ENST00000611067 LELP1Q5T871 98 aa12.68□□□□□ -0.38
SEMA3B-210ENST00000611067 XAGE1AQ9HD64 81 aa12.68□□□□□ -0.38
SEMA3B-210ENST00000611067 Q6ZTC4 211 aa12.67□□□□□ -0.38
SEMA3B-210ENST00000611067 NREPQ16612 68 aa12.66□□□□□ -0.38
SEMA3B-210ENST00000611067 FP248Q71RG6 208 aaPredicted RBP12.66□□□□□ -0.38
SEMA3B-210ENST00000611067 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
SEMA3B-210ENST00000611067 KLK12Q9UKR0 248 aa12.65□□□□□ -0.38
SEMA3B-210ENST00000611067 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
SEMA3B-210ENST00000611067 LINC00336Q6ZUF6 198 aa12.64□□□□□ -0.39
SEMA3B-210ENST00000611067 TENM3Q9P273 2699 aa12.64□□□□□ -0.39
SEMA3B-210ENST00000611067 BPY2O14599 106 aa12.64□□□□□ -0.39
SEMA3B-210ENST00000611067 PRO0628Q9UI54 55 aa12.64□□□□□ -0.39
SEMA3B-210ENST00000611067 H3BNG1 76 aa12.62□□□□□ -0.39
SEMA3B-210ENST00000611067 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
SEMA3B-210ENST00000611067 VPREB1P12018 145 aa12.62□□□□□ -0.39
SEMA3B-210ENST00000611067 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
SEMA3B-210ENST00000611067 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
SEMA3B-210ENST00000611067 M0R378 163 aa12.58□□□□□ -0.4
SEMA3B-210ENST00000611067 IGKV4-1P06312 121 aa12.58□□□□□ -0.4
SEMA3B-210ENST00000611067 LINC00474Q9P2X8 69 aa12.55□□□□□ -0.4
SEMA3B-210ENST00000611067 Q8N9L7 120 aa12.55□□□□□ -0.4
SEMA3B-210ENST00000611067 CAMK2N2Q96S95 79 aa12.55□□□□□ -0.4
SEMA3B-210ENST00000611067 OCR1Q9BZK8 76 aa12.54□□□□□ -0.4
SEMA3B-210ENST00000611067 A0A0U1RQV1 116 aa12.52□□□□□ -0.41
SEMA3B-210ENST00000611067 HIGD2BQ4VC39 106 aa12.52□□□□□ -0.41
SEMA3B-210ENST00000611067 PRYO14603 147 aa12.51□□□□□ -0.41
SEMA3B-210ENST00000611067 Q6ZRU5 148 aa12.49□□□□□ -0.41
SEMA3B-210ENST00000611067 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
SEMA3B-210ENST00000611067 KRTAP26-1Q6PEX3 210 aa12.46□□□□□ -0.41
SEMA3B-210ENST00000611067 C3orf84H3BNL1 204 aa12.46□□□□□ -0.42
SEMA3B-210ENST00000611067 ESRGQ1W209 222 aa12.46□□□□□ -0.42
SEMA3B-210ENST00000611067 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
SEMA3B-210ENST00000611067 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
SEMA3B-210ENST00000611067 FAM229BQ4G0N7 80 aa12.45□□□□□ -0.42
SEMA3B-210ENST00000611067 FUSP35637 526 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEMA3B-210ENST00000611067 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
SEMA3B-210ENST00000611067 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
SEMA3B-210ENST00000611067 C1orf43Q9BWL3 253 aa12.42□□□□□ -0.42
SEMA3B-210ENST00000611067 Q6ZRP5 223 aa12.42□□□□□ -0.42
SEMA3B-210ENST00000611067 Q8N377 158 aa12.41□□□□□ -0.42
SEMA3B-210ENST00000611067 HIGD2AQ9BW72 106 aa12.41□□□□□ -0.42
SEMA3B-210ENST00000611067 KCNQ1DNQ9H478 68 aa12.41□□□□□ -0.42
SEMA3B-210ENST00000611067 A0A1B0GW54 56 aa12.4□□□□□ -0.42
SEMA3B-210ENST00000611067 DEFB105AQ8NG35 78 aa12.39□□□□□ -0.43
SEMA3B-210ENST00000611067 MPLKIPQ8TAP9 179 aa12.37□□□□□ -0.43
SEMA3B-210ENST00000611067 BRK1Q8WUW1 75 aa12.37□□□□□ -0.43
SEMA3B-210ENST00000611067 SMIM29Q86T20 159 aa12.36□□□□□ -0.43
SEMA3B-210ENST00000611067 F8WDY8 70 aa12.36□□□□□ -0.43
SEMA3B-210ENST00000611067 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
SEMA3B-210ENST00000611067 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
SEMA3B-210ENST00000611067 NKAPP1Q8N9T2 125 aa12.35□□□□□ -0.43
SEMA3B-210ENST00000611067 LCE6AA0A183 80 aa12.35□□□□□ -0.43
SEMA3B-210ENST00000611067 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
SEMA3B-210ENST00000611067 COL7A1Q02388 2944 aa12.33□□□□□ -0.44
SEMA3B-210ENST00000611067 A0A1W2PNM2 257 aa12.33□□□□□ -0.44
SEMA3B-210ENST00000611067 C7orf33Q8WU49 177 aa12.33□□□□□ -0.44
SEMA3B-210ENST00000611067 PKIGQ9Y2B9 76 aa12.33□□□□□ -0.44
SEMA3B-210ENST00000611067 DHRS4-AS1Q9P1J3 65 aa12.32□□□□□ -0.44
SEMA3B-210ENST00000611067 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
SEMA3B-210ENST00000611067 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
SEMA3B-210ENST00000611067 SYCNQ0VAF6 134 aa12.32□□□□□ -0.44
SEMA3B-210ENST00000611067 SERTAD4-AS1Q5TG53 156 aa12.32□□□□□ -0.44
SEMA3B-210ENST00000611067 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
SEMA3B-210ENST00000611067 DNAH10OSP0CZ25 163 aa12.31□□□□□ -0.44
SEMA3B-210ENST00000611067 TNP2Q05952 138 aa12.31□□□□□ -0.44
SEMA3B-210ENST00000611067 Q6ZRX8 168 aa12.29□□□□□ -0.44
SEMA3B-210ENST00000611067 C1orf137Q5JT78 98 aa12.28□□□□□ -0.44
SEMA3B-210ENST00000611067 Q8NBF4 154 aa12.28□□□□□ -0.44
SEMA3B-210ENST00000611067 DNHD1Q96M86 4753 aa12.27□□□□□ -0.44
SEMA3B-210ENST00000611067 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
SEMA3B-210ENST00000611067 Q9BRP9 147 aa12.27□□□□□ -0.45
SEMA3B-210ENST00000611067 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
SEMA3B-210ENST00000611067 KRTAP4-16G5E9R7 235 aaPredicted RBP12.26□□□□□ -0.45
SEMA3B-210ENST00000611067 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
SEMA3B-210ENST00000611067 PLA2G2DQ9UNK4 145 aa12.26□□□□□ -0.45
SEMA3B-210ENST00000611067 ZCCHC13Q8WW36 166 aaKnown RBP12.25□□□□□ -0.45
SEMA3B-210ENST00000611067 DSCR10P59022 87 aa12.24□□□□□ -0.45
SEMA3B-210ENST00000611067 ETDCA0A1B0GVM5 59 aa12.23□□□□□ -0.45
SEMA3B-210ENST00000611067 TLX1NBP0CAT3 122 aa12.23□□□□□ -0.45
SEMA3B-210ENST00000611067 SPRR1AP35321 89 aa12.23□□□□□ -0.45
SEMA3B-210ENST00000611067 IGLV1-50A0A075B6I6 118 aa12.21□□□□□ -0.45
SEMA3B-210ENST00000611067 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
SEMA3B-210ENST00000611067 NUPR2A6NF83 97 aa12.21□□□□□ -0.46
SEMA3B-210ENST00000611067 ST20-AS1Q8NBB2 130 aa12.21□□□□□ -0.46
SEMA3B-210ENST00000611067 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 K7EQZ3 153 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 C1orf64Q8NEQ6 169 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
SEMA3B-210ENST00000611067 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
SEMA3B-210ENST00000611067 Q1T7F1 81 aa12.18□□□□□ -0.46
SEMA3B-210ENST00000611067 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms