RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 NMUP48645 174 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 LINC00310P59036 64 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 HERVK_113P61574 105 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 XP32Q5T750 250 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.22
POLR2J3-219ENST00000608621 FABP4P15090 132 aa7.4□□□□□ -1.22
POLR2J3-219ENST00000608621 NPC2P61916 151 aa7.4□□□□□ -1.22
POLR2J3-219ENST00000608621 SOSTDC1Q6X4U4 206 aa7.4□□□□□ -1.22
POLR2J3-219ENST00000608621 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
POLR2J3-219ENST00000608621 ZNF73O43830 326 aaPredicted RBP7.39□□□□□ -1.23
POLR2J3-219ENST00000608621 IGKCP01834 107 aa7.39□□□□□ -1.23
POLR2J3-219ENST00000608621 ADAMTSL4-AS1Q5T5F5 129 aa7.39□□□□□ -1.23
POLR2J3-219ENST00000608621 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
POLR2J3-219ENST00000608621 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
POLR2J3-219ENST00000608621 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
POLR2J3-219ENST00000608621 C5orf52A6NGY3 159 aa7.35□□□□□ -1.23
POLR2J3-219ENST00000608621 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
POLR2J3-219ENST00000608621 HRCT1Q6UXD1 115 aa7.34□□□□□ -1.23
POLR2J3-219ENST00000608621 E9PLD3 99 aa7.33□□□□□ -1.24
POLR2J3-219ENST00000608621 SPRR1BP22528 89 aa7.33□□□□□ -1.24
POLR2J3-219ENST00000608621 OR13C6PQ8NH95 151 aa7.33□□□□□ -1.24
POLR2J3-219ENST00000608621 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
POLR2J3-219ENST00000608621 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
POLR2J3-219ENST00000608621 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
POLR2J3-219ENST00000608621 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
POLR2J3-219ENST00000608621 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 LITAFQ99732 161 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
POLR2J3-219ENST00000608621 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
POLR2J3-219ENST00000608621 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
POLR2J3-219ENST00000608621 COLCA2A8K830 154 aa7.28□□□□□ -1.24
POLR2J3-219ENST00000608621 TIMM17BO60830 172 aa7.27□□□□□ -1.25
POLR2J3-219ENST00000608621 TAL2Q16559 108 aa7.27□□□□□ -1.25
POLR2J3-219ENST00000608621 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
POLR2J3-219ENST00000608621 SYS1-DBNDD2H3BUS1 97 aa7.26□□□□□ -1.25
POLR2J3-219ENST00000608621 COX7BP24311 80 aa7.26□□□□□ -1.25
POLR2J3-219ENST00000608621 DEFB105AQ8NG35 78 aa7.26□□□□□ -1.25
POLR2J3-219ENST00000608621 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
POLR2J3-219ENST00000608621 ELOF1P60002 83 aaKnown RBP7.25□□□□□ -1.25
POLR2J3-219ENST00000608621 MT1HP80294 61 aa7.25□□□□□ -1.25
POLR2J3-219ENST00000608621 Q1RN00 199 aa7.25□□□□□ -1.25
POLR2J3-219ENST00000608621 C6orf99Q4VX62 202 aa7.25□□□□□ -1.25
POLR2J3-219ENST00000608621 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
POLR2J3-219ENST00000608621 CD164Q04900 197 aa7.24□□□□□ -1.25
POLR2J3-219ENST00000608621 PRO1933Q9H354 126 aa7.24□□□□□ -1.25
POLR2J3-219ENST00000608621 ZNF815PA8K554 130 aa7.23□□□□□ -1.25
POLR2J3-219ENST00000608621 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
POLR2J3-219ENST00000608621 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
POLR2J3-219ENST00000608621 H7C2G1 150 aa7.22□□□□□ -1.25
POLR2J3-219ENST00000608621 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
POLR2J3-219ENST00000608621 AKR1D1P51857 326 aa7.21□□□□□ -1.26
POLR2J3-219ENST00000608621 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
POLR2J3-219ENST00000608621 SLC7A5P1Q8MH63 180 aa7.21□□□□□ -1.26
POLR2J3-219ENST00000608621 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
POLR2J3-219ENST00000608621 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 TRBV7-6A0A0J9YX20 115 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BKO60814 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BJP06899 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BOP23527 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BBP33778 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BDP58876 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BCP62807 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST2H2BEQ16778 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 Q5XG85 94 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BHQ93079 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BNQ99877 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 HIST1H2BMQ99879 126 aa7.19□□□□□ -1.26
POLR2J3-219ENST00000608621 A0A1B0GWB2 263 aa7.16□□□□□ -1.26
POLR2J3-219ENST00000608621 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
POLR2J3-219ENST00000608621 SCGB1D4Q6XE38 83 aa7.16□□□□□ -1.26
POLR2J3-219ENST00000608621 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
POLR2J3-219ENST00000608621 A6NDN8 102 aa7.15□□□□□ -1.26
POLR2J3-219ENST00000608621 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
POLR2J3-219ENST00000608621 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.27
POLR2J3-219ENST00000608621 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
POLR2J3-219ENST00000608621 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
POLR2J3-219ENST00000608621 IFITM1P13164 125 aa7.13□□□□□ -1.27
POLR2J3-219ENST00000608621 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
POLR2J3-219ENST00000608621 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
POLR2J3-219ENST00000608621 KRTDAPP60985 99 aa7.12□□□□□ -1.27
POLR2J3-219ENST00000608621 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
POLR2J3-219ENST00000608621 A4D1N5 150 aa7.11□□□□□ -1.27
POLR2J3-219ENST00000608621 M0R2T5 61 aa7.11□□□□□ -1.27
POLR2J3-219ENST00000608621 Q6ZVH6 145 aa7.11□□□□□ -1.27
POLR2J3-219ENST00000608621 TCL1BO95988 128 aa7.1□□□□□ -1.27
POLR2J3-219ENST00000608621 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
POLR2J3-219ENST00000608621 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
POLR2J3-219ENST00000608621 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
POLR2J3-219ENST00000608621 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
POLR2J3-219ENST00000608621 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
POLR2J3-219ENST00000608621 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms