RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ST20-AS1	Q8NBB2	130 aa		11.44	□□□□□ -0.58
NECAB3-222	ENST00000607805	TRAV23DV6	A0A075B6W5	121 aa		11.43	□□□□□ -0.58
NECAB3-222	ENST00000607805	C5orf52	A6NGY3	159 aa		11.43	□□□□□ -0.58
NECAB3-222	ENST00000607805	LEPROTL1	O95214	131 aa		11.43	□□□□□ -0.58
NECAB3-222	ENST00000607805		J3QQQ9	107 aa		11.42	□□□□□ -0.58
NECAB3-222	ENST00000607805	EIF4EBP3	O60516	100 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAB3-222	ENST00000607805	PCOTH	Q58A44	107 aa		11.42	□□□□□ -0.58
NECAB3-222	ENST00000607805	ZNF73	O43830	326 aa	Predicted RBP	11.41	□□□□□ -0.58
NECAB3-222	ENST00000607805	LINC00310	P59036	64 aa		11.41	□□□□□ -0.58
NECAB3-222	ENST00000607805	S100A7L2	Q5SY68	101 aa		11.41	□□□□□ -0.58
NECAB3-222	ENST00000607805	SOSTDC1	Q6X4U4	206 aa		11.41	□□□□□ -0.58
NECAB3-222	ENST00000607805	SPRR1B	P22528	89 aa		11.4	□□□□□ -0.58
NECAB3-222	ENST00000607805	LOR	P23490	312 aa	Predicted RBP	11.4	□□□□□ -0.58
NECAB3-222	ENST00000607805	CFC1B	P0CG36	223 aa		11.39	□□□□□ -0.59
NECAB3-222	ENST00000607805	NMU	P48645	174 aa		11.39	□□□□□ -0.59
NECAB3-222	ENST00000607805	MIEN1	Q9BRT3	115 aa		11.39	□□□□□ -0.59
NECAB3-222	ENST00000607805	HSPB8	Q9UJY1	196 aa		11.39	□□□□□ -0.59
NECAB3-222	ENST00000607805	IGLV8-61	A0A075B6I0	122 aa		11.38	□□□□□ -0.59
NECAB3-222	ENST00000607805	FABP4	P15090	132 aa		11.38	□□□□□ -0.59
NECAB3-222	ENST00000607805	PLN	P26678	52 aa		11.37	□□□□□ -0.59
NECAB3-222	ENST00000607805	ADAMTSL4-AS1	Q5T5F5	129 aa		11.36	□□□□□ -0.59
NECAB3-222	ENST00000607805	KRTAP10-6	P60371	365 aa	Predicted RBP	11.35	□□□□□ -0.59
NECAB3-222	ENST00000607805	LIMD2	Q9BT23	127 aa		11.35	□□□□□ -0.59
NECAB3-222	ENST00000607805	C9orf92	A6NGG3	77 aa		11.34	□□□□□ -0.59
NECAB3-222	ENST00000607805	DPM2	O94777	84 aa		11.32	□□□□□ -0.6
NECAB3-222	ENST00000607805	LGALS3	P17931	250 aa	Known RBP	11.32	□□□□□ -0.6
NECAB3-222	ENST00000607805		A0A0J9YXY3	114 aa		11.31	□□□□□ -0.6
NECAB3-222	ENST00000607805	HERVK_113	P61574	105 aa		11.31	□□□□□ -0.6
NECAB3-222	ENST00000607805	NPC2	P61916	151 aa		11.31	□□□□□ -0.6
NECAB3-222	ENST00000607805	HRCT1	Q6UXD1	115 aa		11.31	□□□□□ -0.6
NECAB3-222	ENST00000607805	PMCHL2	Q9BQD1	86 aa		11.3	□□□□□ -0.6
NECAB3-222	ENST00000607805	IGKC	P01834	107 aa		11.29	□□□□□ -0.6
NECAB3-222	ENST00000607805	HINT1	P49773	126 aa	Predicted RBP	11.28	□□□□□ -0.6
NECAB3-222	ENST00000607805	SLC25A34	Q6PIV7	304 aa		11.28	□□□□□ -0.6
NECAB3-222	ENST00000607805	CBY1	Q9Y3M2	126 aa		11.28	□□□□□ -0.6
NECAB3-222	ENST00000607805	HIST1H2BK	O60814	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BJ	P06899	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BO	P23527	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BB	P33778	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BD	P58876	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BC	P62807	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	CD164	Q04900	197 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST2H2BE	Q16778	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BH	Q93079	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BN	Q99877	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	HIST1H2BM	Q99879	126 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	DHRS4-AS1	Q9P1J3	65 aa		11.27	□□□□□ -0.61
NECAB3-222	ENST00000607805	LITAF	Q99732	161 aa		11.26	□□□□□ -0.61
NECAB3-222	ENST00000607805	LAMTOR3	Q9UHA4	124 aa		11.25	□□□□□ -0.61
NECAB3-222	ENST00000607805		Q5XG85	94 aa		11.24	□□□□□ -0.61
NECAB3-222	ENST00000607805	SPANXC	Q9NY87	97 aa		11.24	□□□□□ -0.61
NECAB3-222	ENST00000607805		E9PLD3	99 aa		11.23	□□□□□ -0.61
NECAB3-222	ENST00000607805	LINC00308	Q8TCZ7	52 aa		11.23	□□□□□ -0.61
NECAB3-222	ENST00000607805	ELOF1	P60002	83 aa	Known RBP	11.22	□□□□□ -0.61
NECAB3-222	ENST00000607805	SYS1-DBNDD2	H3BUS1	97 aa		11.2	□□□□□ -0.62
NECAB3-222	ENST00000607805	C1orf195	Q5TG92	126 aa		11.19	□□□□□ -0.62
NECAB3-222	ENST00000607805	OR13C6P	Q8NH95	151 aa		11.19	□□□□□ -0.62
NECAB3-222	ENST00000607805	SPANXD	Q9BXN6	97 aa		11.19	□□□□□ -0.62
NECAB3-222	ENST00000607805	TIMM17B	O60830	172 aa		11.18	□□□□□ -0.62
NECAB3-222	ENST00000607805	RPL37	P61927	97 aa	Known RBP	11.18	□□□□□ -0.62
NECAB3-222	ENST00000607805		Q1RN00	199 aa		11.18	□□□□□ -0.62
NECAB3-222	ENST00000607805	PRO1933	Q9H354	126 aa		11.18	□□□□□ -0.62
NECAB3-222	ENST00000607805	SMIM29	Q86T20	159 aa		11.17	□□□□□ -0.62
NECAB3-222	ENST00000607805	COX7B	P24311	80 aa		11.16	□□□□□ -0.62
NECAB3-222	ENST00000607805	TEX49	A0A1B0GTD5	131 aa		11.15	□□□□□ -0.62
NECAB3-222	ENST00000607805		H7C2G1	150 aa		11.15	□□□□□ -0.62
NECAB3-222	ENST00000607805	C6orf99	Q4VX62	202 aa		11.15	□□□□□ -0.62
NECAB3-222	ENST00000607805	PET117	Q6UWS5	81 aa		11.15	□□□□□ -0.62
NECAB3-222	ENST00000607805	TAL2	Q16559	108 aa		11.14	□□□□□ -0.63
NECAB3-222	ENST00000607805	LINC01545	Q5VT33	79 aa		11.14	□□□□□ -0.63
NECAB3-222	ENST00000607805		M0R2T5	61 aa		11.13	□□□□□ -0.63
NECAB3-222	ENST00000607805	DEFB105A	Q8NG35	78 aa		11.13	□□□□□ -0.63
NECAB3-222	ENST00000607805	AKR1D1	P51857	326 aa		11.12	□□□□□ -0.63
NECAB3-222	ENST00000607805	COA6	Q5JTJ3	125 aa	Known RBP	11.12	□□□□□ -0.63
NECAB3-222	ENST00000607805	TRBV7-6	A0A0J9YX20	115 aa		11.11	□□□□□ -0.63
NECAB3-222	ENST00000607805	C3orf79	P0CE67	100 aa		11.11	□□□□□ -0.63
NECAB3-222	ENST00000607805	LINC00518	Q8N0U6	118 aa		11.11	□□□□□ -0.63
NECAB3-222	ENST00000607805	IGLV5-48	A0A075B6I7	105 aa		11.1	□□□□□ -0.63
NECAB3-222	ENST00000607805		A0A0G2JQZ4	141 aa		11.1	□□□□□ -0.63
NECAB3-222	ENST00000607805	KRTDAP	P60985	99 aa		11.09	□□□□□ -0.63
NECAB3-222	ENST00000607805	COX6B2	Q6YFQ2	88 aa		11.08	□□□□□ -0.64
NECAB3-222	ENST00000607805	TTTY13	Q9BZ97	58 aa		11.06	□□□□□ -0.64
NECAB3-222	ENST00000607805	ZNF815P	A8K554	130 aa		11.05	□□□□□ -0.64
NECAB3-222	ENST00000607805		A0A1B0GWB2	263 aa		11.04	□□□□□ -0.64
NECAB3-222	ENST00000607805	C20orf202	A1L168	122 aa		11.04	□□□□□ -0.64
NECAB3-222	ENST00000607805	S100A1	P23297	94 aa		10.99	□□□□□ -0.65
NECAB3-222	ENST00000607805	SSPO	A2VEC9	5147 aa		10.99	□□□□□ -0.65
NECAB3-222	ENST00000607805	TCL1B	O95988	128 aa		10.97	□□□□□ -0.65
NECAB3-222	ENST00000607805	ATOH7	Q8N100	152 aa		10.97	□□□□□ -0.65
NECAB3-222	ENST00000607805	ANKRD39	Q53RE8	183 aa		10.96	□□□□□ -0.65
NECAB3-222	ENST00000607805	SCGB1D4	Q6XE38	83 aa		10.96	□□□□□ -0.65
NECAB3-222	ENST00000607805	USH2A	O75445	5202 aa		10.96	□□□□□ -0.66
NECAB3-222	ENST00000607805		A4D1N5	150 aa		10.94	□□□□□ -0.66
NECAB3-222	ENST00000607805	IFITM1	P13164	125 aa		10.93	□□□□□ -0.66
NECAB3-222	ENST00000607805	S100A2	P29034	98 aa		10.92	□□□□□ -0.66
NECAB3-222	ENST00000607805		A6NDN8	102 aa		10.91	□□□□□ -0.66
NECAB3-222	ENST00000607805	HIST3H2BB	Q8N257	126 aa		10.9	□□□□□ -0.66
NECAB3-222	ENST00000607805	COPS9	Q8WXC6	57 aa		10.9	□□□□□ -0.66
NECAB3-222	ENST00000607805	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.89	□□□□□ -0.67

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