RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SNCGO76070 127 aa13.71□□□□□ -0.22
USP6NL-204ENST00000606752 COX7BP24311 80 aa13.69□□□□□ -0.22
USP6NL-204ENST00000606752 ELOF1P60002 83 aaKnown RBP13.69□□□□□ -0.22
USP6NL-204ENST00000606752 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
USP6NL-204ENST00000606752 BAALC-AS2P0C853 105 aa13.68□□□□□ -0.22
USP6NL-204ENST00000606752 TEN1Q86WV5 123 aa13.68□□□□□ -0.22
USP6NL-204ENST00000606752 PRYO14603 147 aa13.67□□□□□ -0.22
USP6NL-204ENST00000606752 FUSP35637 526 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP6NL-204ENST00000606752 IGLV5-52A0A0A0MRZ9 124 aa13.67□□□□□ -0.22
USP6NL-204ENST00000606752 hADV29S1A0JD25 119 aa13.67□□□□□ -0.22
USP6NL-204ENST00000606752 OCIAD2Q56VL3 154 aa13.66□□□□□ -0.22
USP6NL-204ENST00000606752 PANO1I0J062 215 aa13.64□□□□□ -0.23
USP6NL-204ENST00000606752 SPRR1AP35321 89 aa13.63□□□□□ -0.23
USP6NL-204ENST00000606752 SPACA4Q8TDM5 124 aa13.63□□□□□ -0.23
USP6NL-204ENST00000606752 DPH3Q96FX2 82 aa13.63□□□□□ -0.23
USP6NL-204ENST00000606752 LCE6AA0A183 80 aa13.62□□□□□ -0.23
USP6NL-204ENST00000606752 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
USP6NL-204ENST00000606752 ORMDL1Q9P0S3 153 aa13.62□□□□□ -0.23
USP6NL-204ENST00000606752 HYDINQ4G0P3 5121 aa13.62□□□□□ -0.23
USP6NL-204ENST00000606752 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-204ENST00000606752 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-204ENST00000606752 PPDPFLQ8WWR9 84 aa13.6□□□□□ -0.23
USP6NL-204ENST00000606752 K7ERU9 68 aa13.59□□□□□ -0.23
USP6NL-204ENST00000606752 PHF5AQ7RTV0 110 aaKnown RBP13.59□□□□□ -0.23
USP6NL-204ENST00000606752 ETDCA0A1B0GVM5 59 aa13.58□□□□□ -0.24
USP6NL-204ENST00000606752 EPM2AB3EWF7 344 aa13.58□□□□□ -0.24
USP6NL-204ENST00000606752 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
USP6NL-204ENST00000606752 HECTD4Q9Y4D8 3996 aa13.57□□□□□ -0.24
USP6NL-204ENST00000606752 B5MCH6 92 aa13.57□□□□□ -0.24
USP6NL-204ENST00000606752 INAFM2P0DMQ5 153 aa13.57□□□□□ -0.24
USP6NL-204ENST00000606752 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
USP6NL-204ENST00000606752 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
USP6NL-204ENST00000606752 FRAS1Q86XX4 4008 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 Q6ZRX8 168 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 SACSQ9NZJ4 4579 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 TMEM256-PLSCR3K7ERE1 68 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 UBE2BP63146 152 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.55□□□□□ -0.24
USP6NL-204ENST00000606752 Q6ZQY7 126 aa13.55□□□□□ -0.24
USP6NL-204ENST00000606752 J3QR89 54 aa13.54□□□□□ -0.24
USP6NL-204ENST00000606752 DHRS4-AS1Q9P1J3 65 aa13.53□□□□□ -0.24
USP6NL-204ENST00000606752 H3BQ85 93 aa13.51□□□□□ -0.25
USP6NL-204ENST00000606752 KRTAP11-1Q8IUC1 163 aa13.5□□□□□ -0.25
USP6NL-204ENST00000606752 GHRHP01286 108 aa13.5□□□□□ -0.25
USP6NL-204ENST00000606752 Q9BRP9 147 aa13.49□□□□□ -0.25
USP6NL-204ENST00000606752 PLAC8Q9NZF1 115 aa13.49□□□□□ -0.25
USP6NL-204ENST00000606752 DNAH11Q96DT5 4516 aa13.47□□□□□ -0.25
USP6NL-204ENST00000606752 FAT2Q9NYQ8 4349 aa13.47□□□□□ -0.25
USP6NL-204ENST00000606752 FAM19A1Q7Z5A9 133 aa13.46□□□□□ -0.26
USP6NL-204ENST00000606752 OBSCN-AS1Q96MR7 158 aa13.45□□□□□ -0.26
USP6NL-204ENST00000606752 LINC00336Q6ZUF6 198 aa13.44□□□□□ -0.26
USP6NL-204ENST00000606752 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
USP6NL-204ENST00000606752 PRLHP81277 87 aa13.41□□□□□ -0.26
USP6NL-204ENST00000606752 SMCR5Q8TEV8 140 aa13.41□□□□□ -0.26
USP6NL-204ENST00000606752 H0Y9J4 135 aa13.4□□□□□ -0.26
USP6NL-204ENST00000606752 ERC2-IT1O76042 136 aa13.39□□□□□ -0.27
USP6NL-204ENST00000606752 FAM30AQ9NZY2 134 aa13.39□□□□□ -0.27
USP6NL-204ENST00000606752 LAMTOR3Q9UHA4 124 aa13.39□□□□□ -0.27
USP6NL-204ENST00000606752 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
USP6NL-204ENST00000606752 BCE1O60756 84 aa13.39□□□□□ -0.27
USP6NL-204ENST00000606752 KRTAP10-1P60331 282 aa13.38□□□□□ -0.27
USP6NL-204ENST00000606752 C14orf132Q9NPU4 83 aa13.37□□□□□ -0.27
USP6NL-204ENST00000606752 Q6ZSA8 131 aa13.36□□□□□ -0.27
USP6NL-204ENST00000606752 DEFB105AQ8NG35 78 aa13.36□□□□□ -0.27
USP6NL-204ENST00000606752 A0A1B0GV72 72 aa13.36□□□□□ -0.27
USP6NL-204ENST00000606752 UBE2AP49459 152 aa13.36□□□□□ -0.27
USP6NL-204ENST00000606752 LINC01547P58512 204 aaPredicted RBP13.36□□□□□ -0.27
USP6NL-204ENST00000606752 PKD1P98161 4303 aa13.35□□□□□ -0.27
USP6NL-204ENST00000606752 Q8N377 158 aa13.35□□□□□ -0.27
USP6NL-204ENST00000606752 ST20-AS1Q8NBB2 130 aa13.35□□□□□ -0.27
USP6NL-204ENST00000606752 HIGD2AQ9BW72 106 aa13.35□□□□□ -0.27
USP6NL-204ENST00000606752 IGLV5-48A0A075B6I7 105 aa13.34□□□□□ -0.27
USP6NL-204ENST00000606752 NDUFV3P56181 108 aaKnown RBP13.34□□□□□ -0.27
USP6NL-204ENST00000606752 CIRBP-AS1Q8TBR5 109 aa13.34□□□□□ -0.27
USP6NL-204ENST00000606752 RBM3P98179 157 aaKnown RBP13.33□□□□□ -0.28
USP6NL-204ENST00000606752 VPS25Q9BRG1 176 aa13.32□□□□□ -0.28
USP6NL-204ENST00000606752 PSORS1C2Q9UIG4 136 aa13.32□□□□□ -0.28
USP6NL-204ENST00000606752 KRTAP13-1Q8IUC0 172 aa13.31□□□□□ -0.28
USP6NL-204ENST00000606752 RYR2Q92736 4967 aa13.3□□□□□ -0.28
USP6NL-204ENST00000606752 FAM240AA0A1B0GVK7 77 aa13.29□□□□□ -0.28
USP6NL-204ENST00000606752 SCXQ7RTU7 201 aa13.29□□□□□ -0.28
USP6NL-204ENST00000606752 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
USP6NL-204ENST00000606752 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.28
USP6NL-204ENST00000606752 DSCR8Q96T75 97 aa13.27□□□□□ -0.29
USP6NL-204ENST00000606752 KMT2CQ8NEZ4 4911 aaKnown RBP13.27□□□□□ -0.29
USP6NL-204ENST00000606752 ACYP1P07311 99 aa13.26□□□□□ -0.29
USP6NL-204ENST00000606752 A0A1B0GVY2 172 aa13.25□□□□□ -0.29
USP6NL-204ENST00000606752 CCKP06307 115 aa13.25□□□□□ -0.29
USP6NL-204ENST00000606752 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
USP6NL-204ENST00000606752 LOC110117498A0A087WWA1 95 aa13.25□□□□□ -0.29
USP6NL-204ENST00000606752 CDIP1Q9H305 208 aa13.25□□□□□ -0.29
USP6NL-204ENST00000606752 PDE6GP18545 87 aa13.23□□□□□ -0.29
USP6NL-204ENST00000606752 Q6ZQT0 140 aa13.23□□□□□ -0.29
USP6NL-204ENST00000606752 C3orf22Q8N5N4 141 aa13.23□□□□□ -0.29
USP6NL-204ENST00000606752 TRBV7-4A0A0J9YYF1 115 aa13.22□□□□□ -0.29
USP6NL-204ENST00000606752 HAMPP81172 84 aa13.2□□□□□ -0.3
USP6NL-204ENST00000606752 ZNF861PO60384 105 aa13.19□□□□□ -0.3
USP6NL-204ENST00000606752 SMIM29Q86T20 159 aa13.19□□□□□ -0.3
USP6NL-204ENST00000606752 SPRR1BP22528 89 aa13.18□□□□□ -0.3
USP6NL-204ENST00000606752 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms