RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 IGLV6-57P01721 117 aa10.45□□□□□ -0.74
CCDC12-213ENST00000605875 TRAV23DV6A0A075B6W5 121 aa10.44□□□□□ -0.74
CCDC12-213ENST00000605875 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
CCDC12-213ENST00000605875 LITAFQ99732 161 aa10.44□□□□□ -0.74
CCDC12-213ENST00000605875 KRTDAPP60985 99 aa10.43□□□□□ -0.74
CCDC12-213ENST00000605875 CTAG1AP78358 180 aa10.43□□□□□ -0.74
CCDC12-213ENST00000605875 Q6ZRX8 168 aa10.43□□□□□ -0.74
CCDC12-213ENST00000605875 Q9BRP9 147 aa10.43□□□□□ -0.74
CCDC12-213ENST00000605875 TTTY13Q9BZ97 58 aa10.43□□□□□ -0.74
CCDC12-213ENST00000605875 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
CCDC12-213ENST00000605875 ERC2-IT1O76042 136 aa10.42□□□□□ -0.74
CCDC12-213ENST00000605875 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
CCDC12-213ENST00000605875 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
CCDC12-213ENST00000605875 GAGE2AQ6NT46 116 aa10.41□□□□□ -0.74
CCDC12-213ENST00000605875 Q8NBF4 154 aa10.4□□□□□ -0.74
CCDC12-213ENST00000605875 LINC00308Q8TCZ7 52 aa10.4□□□□□ -0.74
CCDC12-213ENST00000605875 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
CCDC12-213ENST00000605875 TIMM17BO60830 172 aa10.39□□□□□ -0.75
CCDC12-213ENST00000605875 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
CCDC12-213ENST00000605875 KRTAP9-6A0A140TA67 174 aa10.38□□□□□ -0.75
CCDC12-213ENST00000605875 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
CCDC12-213ENST00000605875 IGLV9-49A0A0B4J1Y8 123 aa10.36□□□□□ -0.75
CCDC12-213ENST00000605875 C20orf202A1L168 122 aa10.36□□□□□ -0.75
CCDC12-213ENST00000605875 MOBPQ13875 183 aa10.36□□□□□ -0.75
CCDC12-213ENST00000605875 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-213ENST00000605875 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
CCDC12-213ENST00000605875 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
CCDC12-213ENST00000605875 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
CCDC12-213ENST00000605875 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
CCDC12-213ENST00000605875 SCGB1D4Q6XE38 83 aa10.32□□□□□ -0.76
CCDC12-213ENST00000605875 ST20-AS1Q8NBB2 130 aa10.31□□□□□ -0.76
CCDC12-213ENST00000605875 SPANXDQ9BXN6 97 aa10.31□□□□□ -0.76
CCDC12-213ENST00000605875 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
CCDC12-213ENST00000605875 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
CCDC12-213ENST00000605875 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
CCDC12-213ENST00000605875 FP248Q71RG6 208 aaPredicted RBP10.29□□□□□ -0.76
CCDC12-213ENST00000605875 SPINK1P00995 79 aa10.27□□□□□ -0.77
CCDC12-213ENST00000605875 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
CCDC12-213ENST00000605875 SSBP3-AS1Q7Z2R9 100 aa10.25□□□□□ -0.77
CCDC12-213ENST00000605875 LINC00518Q8N0U6 118 aa10.25□□□□□ -0.77
CCDC12-213ENST00000605875 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
CCDC12-213ENST00000605875 C6orf99Q4VX62 202 aa10.24□□□□□ -0.77
CCDC12-213ENST00000605875 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
CCDC12-213ENST00000605875 COX7BP24311 80 aa10.23□□□□□ -0.77
CCDC12-213ENST00000605875 AKR1D1P51857 326 aa10.23□□□□□ -0.77
CCDC12-213ENST00000605875 ELOF1P60002 83 aaKnown RBP10.23□□□□□ -0.77
CCDC12-213ENST00000605875 HIST3H2BBQ8N257 126 aa10.23□□□□□ -0.77
CCDC12-213ENST00000605875 ASB16-AS1Q495Z4 193 aa10.22□□□□□ -0.77
CCDC12-213ENST00000605875 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
CCDC12-213ENST00000605875 HIST1H2BLQ99880 126 aa10.22□□□□□ -0.77
CCDC12-213ENST00000605875 C5orf52A6NGY3 159 aa10.21□□□□□ -0.77
CCDC12-213ENST00000605875 IFITM1P13164 125 aa10.21□□□□□ -0.77
CCDC12-213ENST00000605875 RPS29P62273 56 aaKnown RBP10.21□□□□□ -0.77
CCDC12-213ENST00000605875 Q8N377 158 aa10.21□□□□□ -0.77
CCDC12-213ENST00000605875 S100A2P29034 98 aa10.2□□□□□ -0.78
CCDC12-213ENST00000605875 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
CCDC12-213ENST00000605875 MUSTN1Q8IVN3 82 aa10.19□□□□□ -0.78
CCDC12-213ENST00000605875 SPRR1BP22528 89 aa10.18□□□□□ -0.78
CCDC12-213ENST00000605875 S100A1P23297 94 aa10.18□□□□□ -0.78
CCDC12-213ENST00000605875 Q6ZVH6 145 aa10.18□□□□□ -0.78
CCDC12-213ENST00000605875 A6NDN8 102 aa10.17□□□□□ -0.78
CCDC12-213ENST00000605875 SNRPEP62304 92 aaKnown RBP10.16□□□□□ -0.78
CCDC12-213ENST00000605875 KRTAP4-1Q9BYQ7 146 aa10.16□□□□□ -0.78
CCDC12-213ENST00000605875 SLC25A20O43772 301 aa10.15□□□□□ -0.78
CCDC12-213ENST00000605875 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
CCDC12-213ENST00000605875 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.78
CCDC12-213ENST00000605875 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
CCDC12-213ENST00000605875 S100A6P06703 90 aa10.14□□□□□ -0.79
CCDC12-213ENST00000605875 A0A1B0GWB2 263 aa10.13□□□□□ -0.79
CCDC12-213ENST00000605875 Q1RN00 199 aa10.13□□□□□ -0.79
CCDC12-213ENST00000605875 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
CCDC12-213ENST00000605875 LAMTOR3Q9UHA4 124 aa10.13□□□□□ -0.79
CCDC12-213ENST00000605875 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
CCDC12-213ENST00000605875 HRCT1Q6UXD1 115 aa10.12□□□□□ -0.79
CCDC12-213ENST00000605875 TRAV13-2A0A0B4J235 113 aa10.11□□□□□ -0.79
CCDC12-213ENST00000605875 TAL2Q16559 108 aa10.11□□□□□ -0.79
CCDC12-213ENST00000605875 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CCDC12-213ENST00000605875 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
CCDC12-213ENST00000605875 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
CCDC12-213ENST00000605875 LIMD2Q9BT23 127 aa10.07□□□□□ -0.8
CCDC12-213ENST00000605875 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
CCDC12-213ENST00000605875 SMIM29Q86T20 159 aa10.05□□□□□ -0.8
CCDC12-213ENST00000605875 A4D1N5 150 aa10.04□□□□□ -0.8
CCDC12-213ENST00000605875 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
CCDC12-213ENST00000605875 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
CCDC12-213ENST00000605875 XP32Q5T750 250 aa10.03□□□□□ -0.8
CCDC12-213ENST00000605875 PRO1933Q9H354 126 aa10.02□□□□□ -0.81
CCDC12-213ENST00000605875 C12orf57Q99622 126 aa10.01□□□□□ -0.81
CCDC12-213ENST00000605875 A0A0G2JQZ4 141 aa10□□□□□ -0.81
CCDC12-213ENST00000605875 H7C2G1 150 aa10□□□□□ -0.81
CCDC12-213ENST00000605875 CD164Q04900 197 aa9.99□□□□□ -0.81
CCDC12-213ENST00000605875 COX8AP10176 69 aa9.98□□□□□ -0.81
CCDC12-213ENST00000605875 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
CCDC12-213ENST00000605875 CRCT1Q9UGL9 99 aa9.98□□□□□ -0.81
CCDC12-213ENST00000605875 VAMP3Q15836 100 aa9.97□□□□□ -0.81
CCDC12-213ENST00000605875 LCE2CQ5TA81 110 aa9.96□□□□□ -0.82
CCDC12-213ENST00000605875 LINC00575Q6W349 94 aa9.96□□□□□ -0.82
CCDC12-213ENST00000605875 Q6ZQY7 126 aa9.95□□□□□ -0.82
CCDC12-213ENST00000605875 FSIP2Q5CZC0 6907 aa9.94□□□□□ -0.82
CCDC12-213ENST00000605875 C9orf92A6NGG3 77 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms