RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 NCR3O14931 201 aa10.03□□□□□ -0.8
SHKBP1-227ENST00000602011 SLC25A20O43772 301 aa10.03□□□□□ -0.8
SHKBP1-227ENST00000602011 IGKCP01834 107 aa10.03□□□□□ -0.8
SHKBP1-227ENST00000602011 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
SHKBP1-227ENST00000602011 B5MCH6 92 aa10.02□□□□□ -0.81
SHKBP1-227ENST00000602011 LINC01545Q5VT33 79 aa10.02□□□□□ -0.81
SHKBP1-227ENST00000602011 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
SHKBP1-227ENST00000602011 C20orf202A1L168 122 aa10.01□□□□□ -0.81
SHKBP1-227ENST00000602011 KRTDAPP60985 99 aa10.01□□□□□ -0.81
SHKBP1-227ENST00000602011 HIST1H2BLQ99880 126 aa10.01□□□□□ -0.81
SHKBP1-227ENST00000602011 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
SHKBP1-227ENST00000602011 DDTP30046 118 aa9.99□□□□□ -0.81
SHKBP1-227ENST00000602011 HERVK_113P61574 105 aa9.99□□□□□ -0.81
SHKBP1-227ENST00000602011 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
SHKBP1-227ENST00000602011 MOBPQ13875 183 aa9.98□□□□□ -0.81
SHKBP1-227ENST00000602011 Q8N377 158 aa9.98□□□□□ -0.81
SHKBP1-227ENST00000602011 PMCHL2Q9BQD1 86 aa9.98□□□□□ -0.81
SHKBP1-227ENST00000602011 NDUFC2O95298 119 aa9.97□□□□□ -0.81
SHKBP1-227ENST00000602011 Q6ZRX8 168 aa9.97□□□□□ -0.81
SHKBP1-227ENST00000602011 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
SHKBP1-227ENST00000602011 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-227ENST00000602011 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
SHKBP1-227ENST00000602011 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
SHKBP1-227ENST00000602011 LEPROTO15243 131 aa9.96□□□□□ -0.82
SHKBP1-227ENST00000602011 NMUP48645 174 aa9.96□□□□□ -0.82
SHKBP1-227ENST00000602011 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-227ENST00000602011 FSIP2Q5CZC0 6907 aa9.96□□□□□ -0.82
SHKBP1-227ENST00000602011 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
SHKBP1-227ENST00000602011 S100A7L2Q5SY68 101 aa9.94□□□□□ -0.82
SHKBP1-227ENST00000602011 XP32Q5T750 250 aa9.93□□□□□ -0.82
SHKBP1-227ENST00000602011 Q9BRP9 147 aa9.93□□□□□ -0.82
SHKBP1-227ENST00000602011 CRCT1Q9UGL9 99 aa9.93□□□□□ -0.82
SHKBP1-227ENST00000602011 J3QQQ9 107 aa9.92□□□□□ -0.82
SHKBP1-227ENST00000602011 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
SHKBP1-227ENST00000602011 HINT1P49773 126 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-227ENST00000602011 E9PLD3 99 aa9.91□□□□□ -0.82
SHKBP1-227ENST00000602011 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-227ENST00000602011 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
SHKBP1-227ENST00000602011 SLC25A34Q6PIV7 304 aa9.88□□□□□ -0.83
SHKBP1-227ENST00000602011 TMA7Q9Y2S6 64 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-227ENST00000602011 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-227ENST00000602011 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
SHKBP1-227ENST00000602011 TSPEAR-AS2P59090 65 aa9.87□□□□□ -0.83
SHKBP1-227ENST00000602011 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
SHKBP1-227ENST00000602011 HSBP1L1C9JCN9 74 aa9.85□□□□□ -0.83
SHKBP1-227ENST00000602011 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
SHKBP1-227ENST00000602011 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
SHKBP1-227ENST00000602011 SPRR1BP22528 89 aa9.82□□□□□ -0.84
SHKBP1-227ENST00000602011 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
SHKBP1-227ENST00000602011 ANKRD39Q53RE8 183 aa9.8□□□□□ -0.84
SHKBP1-227ENST00000602011 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
SHKBP1-227ENST00000602011 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
SHKBP1-227ENST00000602011 LAMTOR3Q9UHA4 124 aa9.79□□□□□ -0.84
SHKBP1-227ENST00000602011 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
SHKBP1-227ENST00000602011 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
SHKBP1-227ENST00000602011 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
SHKBP1-227ENST00000602011 ST20-AS1Q8NBB2 130 aa9.77□□□□□ -0.85
SHKBP1-227ENST00000602011 TIMM17BO60830 172 aa9.76□□□□□ -0.85
SHKBP1-227ENST00000602011 CD164Q04900 197 aa9.76□□□□□ -0.85
SHKBP1-227ENST00000602011 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
SHKBP1-227ENST00000602011 CFC1BP0CG36 223 aa9.75□□□□□ -0.85
SHKBP1-227ENST00000602011 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
SHKBP1-227ENST00000602011 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
SHKBP1-227ENST00000602011 SPANXDQ9BXN6 97 aa9.74□□□□□ -0.85
SHKBP1-227ENST00000602011 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
SHKBP1-227ENST00000602011 NPC2P61916 151 aa9.72□□□□□ -0.85
SHKBP1-227ENST00000602011 KRTAP19-2Q3LHN2 52 aa9.72□□□□□ -0.85
SHKBP1-227ENST00000602011 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
SHKBP1-227ENST00000602011 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
SHKBP1-227ENST00000602011 TTTY13Q9BZ97 58 aa9.72□□□□□ -0.85
SHKBP1-227ENST00000602011 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-227ENST00000602011 Q6ZVH6 145 aa9.71□□□□□ -0.86
SHKBP1-227ENST00000602011 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
SHKBP1-227ENST00000602011 PRO1933Q9H354 126 aa9.71□□□□□ -0.86
SHKBP1-227ENST00000602011 IGLV8-61A0A075B6I0 122 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 TAL2Q16559 108 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 PYY3Q5JQD4 70 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 Q5XG85 94 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
SHKBP1-227ENST00000602011 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 DLEU1O43261 78 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 COX8AP10176 69 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 COX7BP24311 80 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 MT1HP80294 61 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 HRCT1Q6UXD1 115 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 LITAFQ99732 161 aa9.68□□□□□ -0.86
SHKBP1-227ENST00000602011 IFITM1P13164 125 aa9.67□□□□□ -0.86
SHKBP1-227ENST00000602011 PAM16Q9Y3D7 125 aa9.67□□□□□ -0.86
SHKBP1-227ENST00000602011 H7C2G1 150 aa9.66□□□□□ -0.86
SHKBP1-227ENST00000602011 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
SHKBP1-227ENST00000602011 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
SHKBP1-227ENST00000602011 C14orf144Q96I85 54 aa9.63□□□□□ -0.87
SHKBP1-227ENST00000602011 A0A1B0GWB2 263 aa9.61□□□□□ -0.87
SHKBP1-227ENST00000602011 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
SHKBP1-227ENST00000602011 A4D1N5 150 aa9.6□□□□□ -0.87
SHKBP1-227ENST00000602011 Q1RN00 199 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms