RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
HIF3A-218ENST00000600383 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
HIF3A-218ENST00000600383 COX7BP24311 80 aa9.69□□□□□ -0.86
HIF3A-218ENST00000600383 MRPL55Q7Z7F7 128 aaKnown RBP9.69□□□□□ -0.86
HIF3A-218ENST00000600383 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
HIF3A-218ENST00000600383 A0A1B0GX51 115 aa9.68□□□□□ -0.86
HIF3A-218ENST00000600383 IGLV5-37A0A075B6J1 123 aa9.68□□□□□ -0.86
HIF3A-218ENST00000600383 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
HIF3A-218ENST00000600383 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
HIF3A-218ENST00000600383 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
HIF3A-218ENST00000600383 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
HIF3A-218ENST00000600383 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
HIF3A-218ENST00000600383 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
HIF3A-218ENST00000600383 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
HIF3A-218ENST00000600383 TRBV7-6A0A0J9YX20 115 aa9.64□□□□□ -0.87
HIF3A-218ENST00000600383 Q6ZQY7 126 aa9.64□□□□□ -0.87
HIF3A-218ENST00000600383 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
HIF3A-218ENST00000600383 TMEM256-PLSCR3K7ERE1 68 aa9.62□□□□□ -0.87
HIF3A-218ENST00000600383 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
HIF3A-218ENST00000600383 PANO1I0J062 215 aa9.61□□□□□ -0.87
HIF3A-218ENST00000600383 PRYO14603 147 aa9.61□□□□□ -0.87
HIF3A-218ENST00000600383 RTL8CO15255 209 aa9.61□□□□□ -0.87
HIF3A-218ENST00000600383 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
HIF3A-218ENST00000600383 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
HIF3A-218ENST00000600383 TNP2Q05952 138 aa9.59□□□□□ -0.87
HIF3A-218ENST00000600383 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
HIF3A-218ENST00000600383 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
HIF3A-218ENST00000600383 LINC00474Q9P2X8 69 aa9.59□□□□□ -0.87
HIF3A-218ENST00000600383 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
HIF3A-218ENST00000600383 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
HIF3A-218ENST00000600383 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
HIF3A-218ENST00000600383 B5MCH6 92 aa9.57□□□□□ -0.88
HIF3A-218ENST00000600383 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-218ENST00000600383 UBE2BP63146 152 aa9.57□□□□□ -0.88
HIF3A-218ENST00000600383 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-218ENST00000600383 ANAPC13Q9BS18 74 aa9.57□□□□□ -0.88
HIF3A-218ENST00000600383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-218ENST00000600383 SPRR1AP35321 89 aa9.56□□□□□ -0.88
HIF3A-218ENST00000600383 Q6Q795 121 aa9.56□□□□□ -0.88
HIF3A-218ENST00000600383 Q6ZRX8 168 aa9.56□□□□□ -0.88
HIF3A-218ENST00000600383 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
HIF3A-218ENST00000600383 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
HIF3A-218ENST00000600383 Q9BRP9 147 aa9.55□□□□□ -0.88
HIF3A-218ENST00000600383 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
HIF3A-218ENST00000600383 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
HIF3A-218ENST00000600383 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
HIF3A-218ENST00000600383 GAGE2AQ6NT46 116 aa9.53□□□□□ -0.88
HIF3A-218ENST00000600383 OBSCN-AS1Q96MR7 158 aa9.53□□□□□ -0.88
HIF3A-218ENST00000600383 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
HIF3A-218ENST00000600383 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
HIF3A-218ENST00000600383 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
HIF3A-218ENST00000600383 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
HIF3A-218ENST00000600383 GHRHP01286 108 aa9.51□□□□□ -0.89
HIF3A-218ENST00000600383 PRLHP81277 87 aa9.51□□□□□ -0.89
HIF3A-218ENST00000600383 HYDINQ4G0P3 5121 aa9.51□□□□□ -0.89
HIF3A-218ENST00000600383 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
HIF3A-218ENST00000600383 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
HIF3A-218ENST00000600383 H3BQ85 93 aa9.49□□□□□ -0.89
HIF3A-218ENST00000600383 ERC2-IT1O76042 136 aa9.49□□□□□ -0.89
HIF3A-218ENST00000600383 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
HIF3A-218ENST00000600383 KRTAP10-2P60368 255 aa9.49□□□□□ -0.89
HIF3A-218ENST00000600383 ST20-AS1Q8NBB2 130 aa9.49□□□□□ -0.89
HIF3A-218ENST00000600383 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
HIF3A-218ENST00000600383 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
HIF3A-218ENST00000600383 DNAH17Q9UFH2 4485 aa9.47□□□□□ -0.89
HIF3A-218ENST00000600383 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.89
HIF3A-218ENST00000600383 Q8N377 158 aa9.46□□□□□ -0.9
HIF3A-218ENST00000600383 ACYP1P07311 99 aa9.45□□□□□ -0.9
HIF3A-218ENST00000600383 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
HIF3A-218ENST00000600383 DSCR8Q96T75 97 aa9.44□□□□□ -0.9
HIF3A-218ENST00000600383 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
HIF3A-218ENST00000600383 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
HIF3A-218ENST00000600383 CCKP06307 115 aa9.43□□□□□ -0.9
HIF3A-218ENST00000600383 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
HIF3A-218ENST00000600383 UBE2AP49459 152 aa9.43□□□□□ -0.9
HIF3A-218ENST00000600383 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
HIF3A-218ENST00000600383 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
HIF3A-218ENST00000600383 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
HIF3A-218ENST00000600383 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
HIF3A-218ENST00000600383 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
HIF3A-218ENST00000600383 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
HIF3A-218ENST00000600383 LCE6AA0A183 80 aa9.4□□□□□ -0.91
HIF3A-218ENST00000600383 Q6ZQT0 140 aa9.4□□□□□ -0.91
HIF3A-218ENST00000600383 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.91
HIF3A-218ENST00000600383 BCE1O60756 84 aa9.39□□□□□ -0.91
HIF3A-218ENST00000600383 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
HIF3A-218ENST00000600383 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
HIF3A-218ENST00000600383 LOC110117498A0A087WWA1 95 aa9.38□□□□□ -0.91
HIF3A-218ENST00000600383 H0Y9J4 135 aa9.37□□□□□ -0.91
HIF3A-218ENST00000600383 IMUPQ9GZP8 106 aa9.37□□□□□ -0.91
HIF3A-218ENST00000600383 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
HIF3A-218ENST00000600383 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
HIF3A-218ENST00000600383 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
HIF3A-218ENST00000600383 PDE6GP18545 87 aa9.35□□□□□ -0.91
HIF3A-218ENST00000600383 HAMPP81172 84 aa9.35□□□□□ -0.91
HIF3A-218ENST00000600383 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
HIF3A-218ENST00000600383 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
HIF3A-218ENST00000600383 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
HIF3A-218ENST00000600383 DNAH11Q96DT5 4516 aa9.34□□□□□ -0.91
HIF3A-218ENST00000600383 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms