RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
ZNF548-209ENST00000598895 FAM218AQ96MZ4 157 aa7.79□□□□□ -1.16
ZNF548-209ENST00000598895 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
ZNF548-209ENST00000598895 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
ZNF548-209ENST00000598895 Q5VSD8 79 aa7.78□□□□□ -1.16
ZNF548-209ENST00000598895 SCXQ7RTU7 201 aa7.78□□□□□ -1.16
ZNF548-209ENST00000598895 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
ZNF548-209ENST00000598895 COX17Q14061 63 aa7.77□□□□□ -1.17
ZNF548-209ENST00000598895 GAGE2AQ6NT46 116 aa7.77□□□□□ -1.17
ZNF548-209ENST00000598895 CD164L2Q6UWJ8 174 aa7.77□□□□□ -1.17
ZNF548-209ENST00000598895 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
ZNF548-209ENST00000598895 NDUFC2O95298 119 aa7.76□□□□□ -1.17
ZNF548-209ENST00000598895 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
ZNF548-209ENST00000598895 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
ZNF548-209ENST00000598895 SS18L2Q9UHA2 77 aa7.76□□□□□ -1.17
ZNF548-209ENST00000598895 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
ZNF548-209ENST00000598895 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 PANO1I0J062 215 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 PFN2P35080 140 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 CIRBP-AS1Q8TBR5 109 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 OBSCN-AS1Q96MR7 158 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
ZNF548-209ENST00000598895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
ZNF548-209ENST00000598895 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
ZNF548-209ENST00000598895 CHTF8P0CG12 524 aa7.74□□□□□ -1.17
ZNF548-209ENST00000598895 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
ZNF548-209ENST00000598895 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
ZNF548-209ENST00000598895 A0A087WYN8 130 aa7.73□□□□□ -1.17
ZNF548-209ENST00000598895 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
ZNF548-209ENST00000598895 Q6JHZ5 121 aa7.73□□□□□ -1.17
ZNF548-209ENST00000598895 LINC00528Q8N1L1 170 aa7.73□□□□□ -1.17
ZNF548-209ENST00000598895 LINC00167Q96N53 147 aa7.73□□□□□ -1.17
ZNF548-209ENST00000598895 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 JMJD7-PLA2G4BH0Y9G9 81 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 ATOX1O00244 68 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 UQCRQO14949 82 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
ZNF548-209ENST00000598895 C3orf22Q8N5N4 141 aa7.71□□□□□ -1.18
ZNF548-209ENST00000598895 IGKV2-24A0A0C4DH68 120 aa7.7□□□□□ -1.18
ZNF548-209ENST00000598895 H3BQ85 93 aa7.7□□□□□ -1.18
ZNF548-209ENST00000598895 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
ZNF548-209ENST00000598895 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 Q6ZRU5 148 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
ZNF548-209ENST00000598895 A0A096LNI7 61 aa7.68□□□□□ -1.18
ZNF548-209ENST00000598895 CCKP06307 115 aa7.68□□□□□ -1.18
ZNF548-209ENST00000598895 HIST1H4AP62805 103 aaKnown RBP7.68□□□□□ -1.18
ZNF548-209ENST00000598895 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
ZNF548-209ENST00000598895 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
ZNF548-209ENST00000598895 COX7CP15954 63 aa7.67□□□□□ -1.18
ZNF548-209ENST00000598895 SPACA4Q8TDM5 124 aa7.67□□□□□ -1.18
ZNF548-209ENST00000598895 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
ZNF548-209ENST00000598895 FAT1Q14517 4588 aa7.66□□□□□ -1.18
ZNF548-209ENST00000598895 RPL18AQ02543 176 aaKnown RBP7.65□□□□□ -1.18
ZNF548-209ENST00000598895 NCR3O14931 201 aa7.64□□□□□ -1.19
ZNF548-209ENST00000598895 GHRHP01286 108 aa7.64□□□□□ -1.19
ZNF548-209ENST00000598895 C2orf48Q96LS8 159 aa7.64□□□□□ -1.19
ZNF548-209ENST00000598895 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
ZNF548-209ENST00000598895 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
ZNF548-209ENST00000598895 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
ZNF548-209ENST00000598895 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
ZNF548-209ENST00000598895 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
ZNF548-209ENST00000598895 CRYGAP11844 174 aa7.62□□□□□ -1.19
ZNF548-209ENST00000598895 TRBV10-3A0A0K0K1G6 114 aa7.61□□□□□ -1.19
ZNF548-209ENST00000598895 PDE6GP18545 87 aa7.61□□□□□ -1.19
ZNF548-209ENST00000598895 KRTAP10-4P60372 401 aaPredicted RBP7.61□□□□□ -1.19
ZNF548-209ENST00000598895 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
ZNF548-209ENST00000598895 C6orf48Q9UBA6 75 aa7.61□□□□□ -1.19
ZNF548-209ENST00000598895 PKIGQ9Y2B9 76 aa7.61□□□□□ -1.19
ZNF548-209ENST00000598895 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
ZNF548-209ENST00000598895 C9orf129Q5T035 196 aaKnown RBP7.6□□□□□ -1.19
ZNF548-209ENST00000598895 LINC00575Q6W349 94 aa7.6□□□□□ -1.19
ZNF548-209ENST00000598895 SERP2Q8N6R1 65 aa7.6□□□□□ -1.19
ZNF548-209ENST00000598895 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
ZNF548-209ENST00000598895 C6orf99Q4VX62 202 aa7.59□□□□□ -1.19
ZNF548-209ENST00000598895 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
ZNF548-209ENST00000598895 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
ZNF548-209ENST00000598895 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
ZNF548-209ENST00000598895 hADV29S1A0JD25 119 aa7.58□□□□□ -1.2
ZNF548-209ENST00000598895 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
ZNF548-209ENST00000598895 F8WDY8 70 aa7.57□□□□□ -1.2
ZNF548-209ENST00000598895 BCE1O60756 84 aa7.57□□□□□ -1.2
ZNF548-209ENST00000598895 RBM3P98179 157 aaKnown RBP7.57□□□□□ -1.2
ZNF548-209ENST00000598895 C9orf116Q5BN46 136 aaPredicted RBP7.57□□□□□ -1.2
ZNF548-209ENST00000598895 C7orf33Q8WU49 177 aa7.57□□□□□ -1.2
ZNF548-209ENST00000598895 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
ZNF548-209ENST00000598895 A0A1W2PNN7 141 aa7.56□□□□□ -1.2
ZNF548-209ENST00000598895 IGLV6-57P01721 117 aa7.56□□□□□ -1.2
ZNF548-209ENST00000598895 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
ZNF548-209ENST00000598895 Q6ZRP5 223 aa7.56□□□□□ -1.2
ZNF548-209ENST00000598895 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
ZNF548-209ENST00000598895 TMEM258P61165 79 aa7.55□□□□□ -1.2
ZNF548-209ENST00000598895 DIRC1Q969H9 104 aa7.55□□□□□ -1.2
ZNF548-209ENST00000598895 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms