RNA–Protein interactions for RNA: ENST00000596647.1

PDE4C-209, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-209ENST00000596647 XP32Q5T750 250 aa8.47□□□□□ -1.05
PDE4C-209ENST00000596647 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
PDE4C-209ENST00000596647 IGKCP01834 107 aa8.46□□□□□ -1.06
PDE4C-209ENST00000596647 MOBPQ13875 183 aa8.46□□□□□ -1.06
PDE4C-209ENST00000596647 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
PDE4C-209ENST00000596647 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
PDE4C-209ENST00000596647 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 SLC25A20O43772 301 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 AKR1D1P51857 326 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
PDE4C-209ENST00000596647 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
PDE4C-209ENST00000596647 B5MCH6 92 aa8.44□□□□□ -1.06
PDE4C-209ENST00000596647 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
PDE4C-209ENST00000596647 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
PDE4C-209ENST00000596647 HERV-K104P63124 156 aa8.42□□□□□ -1.06
PDE4C-209ENST00000596647 HERVK_113P61574 105 aa8.41□□□□□ -1.06
PDE4C-209ENST00000596647 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
PDE4C-209ENST00000596647 Q9BRP9 147 aa8.41□□□□□ -1.06
PDE4C-209ENST00000596647 LINC00587B1AMM8 73 aa8.4□□□□□ -1.06
PDE4C-209ENST00000596647 S100A12P80511 92 aa8.4□□□□□ -1.06
PDE4C-209ENST00000596647 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
PDE4C-209ENST00000596647 ATOH7Q8N100 152 aa8.4□□□□□ -1.06
PDE4C-209ENST00000596647 LOC107984156A0A0G2JMH3 177 aa8.39□□□□□ -1.07
PDE4C-209ENST00000596647 Q6ZRX8 168 aa8.39□□□□□ -1.07
PDE4C-209ENST00000596647 ARL17AQ8IVW1 177 aa8.39□□□□□ -1.07
PDE4C-209ENST00000596647 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
PDE4C-209ENST00000596647 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
PDE4C-209ENST00000596647 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
PDE4C-209ENST00000596647 DDTP30046 118 aa8.37□□□□□ -1.07
PDE4C-209ENST00000596647 LEPROTO15243 131 aa8.36□□□□□ -1.07
PDE4C-209ENST00000596647 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
PDE4C-209ENST00000596647 MT1HP80294 61 aa8.36□□□□□ -1.07
PDE4C-209ENST00000596647 LOC105371267A0A1B0GV96 52 aa8.35□□□□□ -1.07
PDE4C-209ENST00000596647 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
PDE4C-209ENST00000596647 E9PLD3 99 aa8.34□□□□□ -1.07
PDE4C-209ENST00000596647 J3QQQ9 107 aa8.34□□□□□ -1.07
PDE4C-209ENST00000596647 PYY3Q5JQD4 70 aa8.34□□□□□ -1.07
PDE4C-209ENST00000596647 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
PDE4C-209ENST00000596647 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
PDE4C-209ENST00000596647 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
PDE4C-209ENST00000596647 CFC1BP0CG36 223 aa8.32□□□□□ -1.08
PDE4C-209ENST00000596647 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
PDE4C-209ENST00000596647 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
PDE4C-209ENST00000596647 NMUP48645 174 aa8.31□□□□□ -1.08
PDE4C-209ENST00000596647 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
PDE4C-209ENST00000596647 MIEN1Q9BRT3 115 aa8.3□□□□□ -1.08
PDE4C-209ENST00000596647 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
PDE4C-209ENST00000596647 NDUFC2O95298 119 aa8.29□□□□□ -1.08
PDE4C-209ENST00000596647 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
PDE4C-209ENST00000596647 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
PDE4C-209ENST00000596647 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
PDE4C-209ENST00000596647 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
PDE4C-209ENST00000596647 SPATA45Q537H7 98 aa8.28□□□□□ -1.08
PDE4C-209ENST00000596647 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
PDE4C-209ENST00000596647 ST20-AS1Q8NBB2 130 aa8.28□□□□□ -1.08
PDE4C-209ENST00000596647 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
PDE4C-209ENST00000596647 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
PDE4C-209ENST00000596647 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
PDE4C-209ENST00000596647 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
PDE4C-209ENST00000596647 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
PDE4C-209ENST00000596647 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
PDE4C-209ENST00000596647 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
PDE4C-209ENST00000596647 SPRR1BP22528 89 aa8.24□□□□□ -1.09
PDE4C-209ENST00000596647 NPC2P61916 151 aa8.24□□□□□ -1.09
PDE4C-209ENST00000596647 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
PDE4C-209ENST00000596647 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
PDE4C-209ENST00000596647 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
PDE4C-209ENST00000596647 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
PDE4C-209ENST00000596647 COX8AP10176 69 aa8.22□□□□□ -1.09
PDE4C-209ENST00000596647 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
PDE4C-209ENST00000596647 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
PDE4C-209ENST00000596647 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
PDE4C-209ENST00000596647 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
PDE4C-209ENST00000596647 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
PDE4C-209ENST00000596647 C12orf57Q99622 126 aa8.2□□□□□ -1.1
PDE4C-209ENST00000596647 DLEU1O43261 78 aa8.19□□□□□ -1.1
PDE4C-209ENST00000596647 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
PDE4C-209ENST00000596647 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
PDE4C-209ENST00000596647 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
PDE4C-209ENST00000596647 TIMM17BO60830 172 aa8.17□□□□□ -1.1
PDE4C-209ENST00000596647 CD164Q04900 197 aa8.17□□□□□ -1.1
PDE4C-209ENST00000596647 LAMTOR3Q9UHA4 124 aa8.17□□□□□ -1.1
PDE4C-209ENST00000596647 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
PDE4C-209ENST00000596647 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
PDE4C-209ENST00000596647 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
PDE4C-209ENST00000596647 LITAFQ99732 161 aa8.15□□□□□ -1.1
PDE4C-209ENST00000596647 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
PDE4C-209ENST00000596647 Q5XG85 94 aa8.14□□□□□ -1.11
PDE4C-209ENST00000596647 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
PDE4C-209ENST00000596647 TSTD3H0UI37 97 aa8.13□□□□□ -1.11
PDE4C-209ENST00000596647 M0R2T5 61 aa8.13□□□□□ -1.11
PDE4C-209ENST00000596647 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
PDE4C-209ENST00000596647 Q6ZVH6 145 aa8.12□□□□□ -1.11
PDE4C-209ENST00000596647 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
PDE4C-209ENST00000596647 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
PDE4C-209ENST00000596647 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
PDE4C-209ENST00000596647 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
PDE4C-209ENST00000596647 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms