RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ERC2-IT1O76042 136 aa10.61□□□□□ -0.71
CCDC43-205ENST00000592333 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
CCDC43-205ENST00000592333 S100A7L2Q5SY68 101 aa10.61□□□□□ -0.71
CCDC43-205ENST00000592333 IGKCP01834 107 aa10.6□□□□□ -0.71
CCDC43-205ENST00000592333 LINC00310P59036 64 aa10.6□□□□□ -0.71
CCDC43-205ENST00000592333 MOBPQ13875 183 aa10.6□□□□□ -0.71
CCDC43-205ENST00000592333 Q8N377 158 aa10.6□□□□□ -0.71
CCDC43-205ENST00000592333 IGLV9-49A0A0B4J1Y8 123 aa10.59□□□□□ -0.71
CCDC43-205ENST00000592333 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
CCDC43-205ENST00000592333 TRAV23DV6A0A075B6W5 121 aa10.58□□□□□ -0.72
CCDC43-205ENST00000592333 ZNF73O43830 326 aaPredicted RBP10.56□□□□□ -0.72
CCDC43-205ENST00000592333 FABP4P15090 132 aa10.55□□□□□ -0.72
CCDC43-205ENST00000592333 HINT1P49773 126 aaPredicted RBP10.55□□□□□ -0.72
CCDC43-205ENST00000592333 E9PLD3 99 aa10.54□□□□□ -0.72
CCDC43-205ENST00000592333 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
CCDC43-205ENST00000592333 A6NJY4 79 aa10.53□□□□□ -0.72
CCDC43-205ENST00000592333 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
CCDC43-205ENST00000592333 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
CCDC43-205ENST00000592333 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
CCDC43-205ENST00000592333 XP32Q5T750 250 aa10.5□□□□□ -0.73
CCDC43-205ENST00000592333 SLC25A34Q6PIV7 304 aa10.5□□□□□ -0.73
CCDC43-205ENST00000592333 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
CCDC43-205ENST00000592333 SPRR1BP22528 89 aa10.49□□□□□ -0.73
CCDC43-205ENST00000592333 LINC01547P58512 204 aaPredicted RBP10.49□□□□□ -0.73
CCDC43-205ENST00000592333 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
CCDC43-205ENST00000592333 COLCA2A8K830 154 aa10.48□□□□□ -0.73
CCDC43-205ENST00000592333 TIMM17BO60830 172 aa10.48□□□□□ -0.73
CCDC43-205ENST00000592333 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
CCDC43-205ENST00000592333 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
CCDC43-205ENST00000592333 NPC2P61916 151 aa10.45□□□□□ -0.74
CCDC43-205ENST00000592333 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
CCDC43-205ENST00000592333 LIMD2Q9BT23 127 aa10.45□□□□□ -0.74
CCDC43-205ENST00000592333 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
CCDC43-205ENST00000592333 SYS1-DBNDD2H3BUS1 97 aa10.44□□□□□ -0.74
CCDC43-205ENST00000592333 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
CCDC43-205ENST00000592333 LITAFQ99732 161 aa10.44□□□□□ -0.74
CCDC43-205ENST00000592333 LINC00518Q8N0U6 118 aa10.43□□□□□ -0.74
CCDC43-205ENST00000592333 KRTAP4-1Q9BYQ7 146 aa10.43□□□□□ -0.74
CCDC43-205ENST00000592333 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
CCDC43-205ENST00000592333 OR13C6PQ8NH95 151 aa10.41□□□□□ -0.74
CCDC43-205ENST00000592333 LAMTOR3Q9UHA4 124 aa10.41□□□□□ -0.74
CCDC43-205ENST00000592333 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
CCDC43-205ENST00000592333 PET117Q6UWS5 81 aa10.4□□□□□ -0.74
CCDC43-205ENST00000592333 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
CCDC43-205ENST00000592333 CD164Q04900 197 aa10.38□□□□□ -0.75
CCDC43-205ENST00000592333 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
CCDC43-205ENST00000592333 ZNF815PA8K554 130 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BKO60814 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BJP06899 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BOP23527 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 COX7BP24311 80 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BBP33778 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BDP58876 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BCP62807 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST2H2BEQ16778 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.36□□□□□ -0.75
CCDC43-205ENST00000592333 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BHQ93079 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BNQ99877 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 HIST1H2BMQ99879 126 aa10.36□□□□□ -0.75
CCDC43-205ENST00000592333 C6orf99Q4VX62 202 aa10.33□□□□□ -0.76
CCDC43-205ENST00000592333 Q5XG85 94 aa10.33□□□□□ -0.76
CCDC43-205ENST00000592333 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
CCDC43-205ENST00000592333 PRO1933Q9H354 126 aa10.33□□□□□ -0.76
CCDC43-205ENST00000592333 TEX49A0A1B0GTD5 131 aa10.32□□□□□ -0.76
CCDC43-205ENST00000592333 TAL2Q16559 108 aa10.32□□□□□ -0.76
CCDC43-205ENST00000592333 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
CCDC43-205ENST00000592333 IFITM1P13164 125 aa10.3□□□□□ -0.76
CCDC43-205ENST00000592333 Q6ZVH6 145 aa10.3□□□□□ -0.76
CCDC43-205ENST00000592333 HRCT1Q6UXD1 115 aa10.28□□□□□ -0.76
CCDC43-205ENST00000592333 A4D1N5 150 aa10.27□□□□□ -0.77
CCDC43-205ENST00000592333 H7C2G1 150 aa10.27□□□□□ -0.77
CCDC43-205ENST00000592333 C3orf79P0CE67 100 aa10.27□□□□□ -0.77
CCDC43-205ENST00000592333 AKR1D1P51857 326 aa10.27□□□□□ -0.77
CCDC43-205ENST00000592333 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.77
CCDC43-205ENST00000592333 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
CCDC43-205ENST00000592333 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
CCDC43-205ENST00000592333 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
CCDC43-205ENST00000592333 Q1RN00 199 aa10.25□□□□□ -0.77
CCDC43-205ENST00000592333 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
CCDC43-205ENST00000592333 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
CCDC43-205ENST00000592333 SMIM29Q86T20 159 aa10.24□□□□□ -0.77
CCDC43-205ENST00000592333 C20orf202A1L168 122 aa10.23□□□□□ -0.77
CCDC43-205ENST00000592333 NHP2Q9NX24 153 aaKnown RBP10.23□□□□□ -0.77
CCDC43-205ENST00000592333 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
CCDC43-205ENST00000592333 A6NDN8 102 aa10.21□□□□□ -0.77
CCDC43-205ENST00000592333 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
CCDC43-205ENST00000592333 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.77
CCDC43-205ENST00000592333 KRTDAPP60985 99 aa10.2□□□□□ -0.78
CCDC43-205ENST00000592333 TRAV13-2A0A0B4J235 113 aa10.19□□□□□ -0.78
CCDC43-205ENST00000592333 CFC1BP0CG36 223 aa10.18□□□□□ -0.78
CCDC43-205ENST00000592333 C1orf195Q5TG92 126 aa10.18□□□□□ -0.78
CCDC43-205ENST00000592333 SNRPEP62304 92 aaKnown RBP10.17□□□□□ -0.78
CCDC43-205ENST00000592333 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
CCDC43-205ENST00000592333 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
CCDC43-205ENST00000592333 TCL1BO95988 128 aa10.15□□□□□ -0.78
CCDC43-205ENST00000592333 MT1HP80294 61 aa10.15□□□□□ -0.78
CCDC43-205ENST00000592333 RPL37P61927 97 aaKnown RBP10.12□□□□□ -0.79
CCDC43-205ENST00000592333 VAMP3Q15836 100 aa10.12□□□□□ -0.79
CCDC43-205ENST00000592333 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms