RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 IGKCP01834 107 aa11.79□□□□□ -0.52
NEDD4L-225ENST00000589054 SLC25A20O43772 301 aa11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 LGALS3P17931 250 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 NMUP48645 174 aa11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 SEC61BP60468 96 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 XP32Q5T750 250 aa11.78□□□□□ -0.52
NEDD4L-225ENST00000589054 S100A1P23297 94 aa11.77□□□□□ -0.53
NEDD4L-225ENST00000589054 ZNF73O43830 326 aaPredicted RBP11.76□□□□□ -0.53
NEDD4L-225ENST00000589054 LCE2CQ5TA81 110 aa11.76□□□□□ -0.53
NEDD4L-225ENST00000589054 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
NEDD4L-225ENST00000589054 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HERVK_113P61574 105 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 C9orf153Q5TBE3 101 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
NEDD4L-225ENST00000589054 LINC01547P58512 204 aaPredicted RBP11.74□□□□□ -0.53
NEDD4L-225ENST00000589054 LITAFQ99732 161 aa11.74□□□□□ -0.53
NEDD4L-225ENST00000589054 E9PLD3 99 aa11.71□□□□□ -0.53
NEDD4L-225ENST00000589054 JOSD1Q15040 202 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-225ENST00000589054 KRTAP19-2Q3LHN2 52 aa11.71□□□□□ -0.53
NEDD4L-225ENST00000589054 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
NEDD4L-225ENST00000589054 SPRR1BP22528 89 aa11.67□□□□□ -0.54
NEDD4L-225ENST00000589054 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
NEDD4L-225ENST00000589054 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
NEDD4L-225ENST00000589054 TTTY13Q9BZ97 58 aa11.66□□□□□ -0.54
NEDD4L-225ENST00000589054 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
NEDD4L-225ENST00000589054 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
NEDD4L-225ENST00000589054 OR13C6PQ8NH95 151 aa11.63□□□□□ -0.55
NEDD4L-225ENST00000589054 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
NEDD4L-225ENST00000589054 FSIP2Q5CZC0 6907 aa11.6□□□□□ -0.55
NEDD4L-225ENST00000589054 PCOTHQ58A44 107 aa11.6□□□□□ -0.55
NEDD4L-225ENST00000589054 COA6Q5JTJ3 125 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-225ENST00000589054 C9orf92A6NGG3 77 aa11.59□□□□□ -0.55
NEDD4L-225ENST00000589054 LINC01545Q5VT33 79 aa11.59□□□□□ -0.55
NEDD4L-225ENST00000589054 TIMM17BO60830 172 aa11.58□□□□□ -0.56
NEDD4L-225ENST00000589054 HINT1P49773 126 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-225ENST00000589054 DHRS4-AS1Q9P1J3 65 aa11.58□□□□□ -0.56
NEDD4L-225ENST00000589054 ELOF1P60002 83 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-225ENST00000589054 MT1HP80294 61 aa11.56□□□□□ -0.56
NEDD4L-225ENST00000589054 C6orf99Q4VX62 202 aa11.56□□□□□ -0.56
NEDD4L-225ENST00000589054 SPANXDQ9BXN6 97 aa11.56□□□□□ -0.56
NEDD4L-225ENST00000589054 ZNF815PA8K554 130 aa11.55□□□□□ -0.56
NEDD4L-225ENST00000589054 Q1RN00 199 aa11.55□□□□□ -0.56
NEDD4L-225ENST00000589054 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
NEDD4L-225ENST00000589054 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
NEDD4L-225ENST00000589054 COX7BP24311 80 aa11.54□□□□□ -0.56
NEDD4L-225ENST00000589054 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
NEDD4L-225ENST00000589054 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
NEDD4L-225ENST00000589054 DEFB105AQ8NG35 78 aa11.53□□□□□ -0.56
NEDD4L-225ENST00000589054 LIMD2Q9BT23 127 aa11.53□□□□□ -0.56
NEDD4L-225ENST00000589054 CBY1Q9Y3M2 126 aa11.53□□□□□ -0.56
NEDD4L-225ENST00000589054 IGLV8-61A0A075B6I0 122 aa11.52□□□□□ -0.57
NEDD4L-225ENST00000589054 H7C2G1 150 aa11.52□□□□□ -0.57
NEDD4L-225ENST00000589054 KRTDAPP60985 99 aa11.52□□□□□ -0.57
NEDD4L-225ENST00000589054 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
NEDD4L-225ENST00000589054 SLC25A34Q6PIV7 304 aa11.5□□□□□ -0.57
NEDD4L-225ENST00000589054 TAL2Q16559 108 aa11.49□□□□□ -0.57
NEDD4L-225ENST00000589054 CRCT1Q9UGL9 99 aa11.49□□□□□ -0.57
NEDD4L-225ENST00000589054 C20orf202A1L168 122 aa11.48□□□□□ -0.57
NEDD4L-225ENST00000589054 S100A6P06703 90 aa11.48□□□□□ -0.57
NEDD4L-225ENST00000589054 CD164Q04900 197 aa11.47□□□□□ -0.57
NEDD4L-225ENST00000589054 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
NEDD4L-225ENST00000589054 TEX49A0A1B0GTD5 131 aa11.46□□□□□ -0.57
NEDD4L-225ENST00000589054 S100A2P29034 98 aa11.46□□□□□ -0.57
NEDD4L-225ENST00000589054 C1orf195Q5TG92 126 aa11.46□□□□□ -0.57
NEDD4L-225ENST00000589054 PRO1933Q9H354 126 aa11.46□□□□□ -0.57
NEDD4L-225ENST00000589054 ANKRD39Q53RE8 183 aa11.45□□□□□ -0.58
NEDD4L-225ENST00000589054 HIST3H2BBQ8N257 126 aa11.43□□□□□ -0.58
NEDD4L-225ENST00000589054 IGLV5-48A0A075B6I7 105 aa11.42□□□□□ -0.58
NEDD4L-225ENST00000589054 TRBV7-6A0A0J9YX20 115 aa11.42□□□□□ -0.58
NEDD4L-225ENST00000589054 AKR1D1P51857 326 aa11.42□□□□□ -0.58
NEDD4L-225ENST00000589054 Q5XG85 94 aa11.42□□□□□ -0.58
NEDD4L-225ENST00000589054 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
NEDD4L-225ENST00000589054 LORP23490 312 aaPredicted RBP11.39□□□□□ -0.59
NEDD4L-225ENST00000589054 MUSTN1Q8IVN3 82 aa11.39□□□□□ -0.59
NEDD4L-225ENST00000589054 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
NEDD4L-225ENST00000589054 FLGP20930 4061 aaPredicted RBP11.39□□□□□ -0.59
NEDD4L-225ENST00000589054 SCGB1D4Q6XE38 83 aa11.38□□□□□ -0.59
NEDD4L-225ENST00000589054 PCP2Q8IVA1 136 aa11.38□□□□□ -0.59
NEDD4L-225ENST00000589054 A6NDN8 102 aa11.37□□□□□ -0.59
NEDD4L-225ENST00000589054 KRTAP10-6P60371 365 aaPredicted RBP11.37□□□□□ -0.59
NEDD4L-225ENST00000589054 SNRPEP62304 92 aaKnown RBP11.37□□□□□ -0.59
NEDD4L-225ENST00000589054 ATOH7Q8N100 152 aa11.37□□□□□ -0.59
NEDD4L-225ENST00000589054 IFITM1P13164 125 aa11.34□□□□□ -0.59
NEDD4L-225ENST00000589054 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-225ENST00000589054 SMIM11BQ8TCY0 68 aa11.34□□□□□ -0.59
NEDD4L-225ENST00000589054 CFC1BP0CG36 223 aa11.3□□□□□ -0.6
NEDD4L-225ENST00000589054 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
NEDD4L-225ENST00000589054 Q6ZVH6 145 aa11.28□□□□□ -0.6
NEDD4L-225ENST00000589054 A4D1N5 150 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms