RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NMUP48645 174 aa3.42□□□□□ -1.86
TPM4-210ENST00000588507 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
TPM4-210ENST00000588507 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
TPM4-210ENST00000588507 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
TPM4-210ENST00000588507 SH2D1AO60880 128 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 RPL24P83731 157 aaKnown RBP3.41□□□□□ -1.86
TPM4-210ENST00000588507 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
TPM4-210ENST00000588507 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 Q6ZVH6 145 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
TPM4-210ENST00000588507 CEND1Q8N111 149 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 Q8N8P6 123 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
TPM4-210ENST00000588507 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 HERVK_113P61574 105 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
TPM4-210ENST00000588507 TRAV12-1A0A0B4J245 112 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 SNAI2O43623 268 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 IGLC6P0CF74 106 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 HIST1H4GQ99525 98 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 CNFNQ9BYD5 112 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
TPM4-210ENST00000588507 TMSB15BA0A087X1C1 80 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 NDUFC2-KCTD14E9PQ53 114 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 H7C423 109 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 NCR2O95944 276 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 NPYP01303 97 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 CRIP1P50238 77 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 SPANXN1Q5VSR9 72 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 Q8N9P0 234 aaPredicted RBP3.38□□□□□ -1.87
TPM4-210ENST00000588507 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 C20orf78Q9BR46 151 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
TPM4-210ENST00000588507 CYSLTR1Q9Y271 337 aa3.38□□□□□ -1.87
TPM4-210ENST00000588507 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
TPM4-210ENST00000588507 A0A096LNJ9 63 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
TPM4-210ENST00000588507 E9PLD3 99 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 F8VRH5 84 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 M0QY20 66 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 PRLHP81277 87 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 C5orf38Q86SI9 138 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 SCGB3A1Q96QR1 104 aa3.37□□□□□ -1.87
TPM4-210ENST00000588507 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
TPM4-210ENST00000588507 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
TPM4-210ENST00000588507 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
TPM4-210ENST00000588507 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 SMKR1H3BMG3 65 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 H3BMG7 143 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 FXYD2P54710 66 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 CKS1BP61024 79 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 C6orf99Q4VX62 202 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 SCGB1D4Q6XE38 83 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 TOMM6Q96B49 74 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 SPANXDQ9BXN6 97 aa3.35□□□□□ -1.87
TPM4-210ENST00000588507 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
TPM4-210ENST00000588507 SUMO2P61956 95 aaKnown RBP3.34□□□□□ -1.87
TPM4-210ENST00000588507 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.87
TPM4-210ENST00000588507 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
TPM4-210ENST00000588507 PPDPFLQ8WWR9 84 aa3.34□□□□□ -1.87
TPM4-210ENST00000588507 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.87
TPM4-210ENST00000588507 LOC107984156A0A0G2JMH3 177 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 VCYO14598 125 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 SCGB1C2P0DMR2 95 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 SMAGPQ0VAQ4 97 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 SUMO4Q6EEV6 95 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 ARL17AQ8IVW1 177 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 NRACQ8N912 160 aa3.33□□□□□ -1.88
TPM4-210ENST00000588507 NAA38Q9BRA0 125 aaKnown RBP3.33□□□□□ -1.88
TPM4-210ENST00000588507 MGPP08493 103 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 PSMB2P49721 201 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 PMVKQ15126 192 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 ETDBQ3ZM63 59 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 TIMM17AQ99595 171 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
TPM4-210ENST00000588507 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
TPM4-210ENST00000588507 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
TPM4-210ENST00000588507 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
TPM4-210ENST00000588507 K7ERJ3 54 aa3.31□□□□□ -1.88
TPM4-210ENST00000588507 COX6CP09669 75 aa3.31□□□□□ -1.88
TPM4-210ENST00000588507 SPINK8P0C7L1 97 aa3.31□□□□□ -1.88
TPM4-210ENST00000588507 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms