RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 CFC1BP0CG36 223 aa7.66□□□□□ -1.18
DNMT1-213ENST00000587604 PLNP26678 52 aa7.66□□□□□ -1.18
DNMT1-213ENST00000587604 PCOTHQ58A44 107 aa7.66□□□□□ -1.18
DNMT1-213ENST00000587604 YPEL4Q96NS1 127 aa7.66□□□□□ -1.18
DNMT1-213ENST00000587604 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.18
DNMT1-213ENST00000587604 SVBPQ8N300 66 aa7.65□□□□□ -1.18
DNMT1-213ENST00000587604 LIMD2Q9BT23 127 aa7.65□□□□□ -1.18
DNMT1-213ENST00000587604 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
DNMT1-213ENST00000587604 LGALS3P17931 250 aaKnown RBP7.64□□□□□ -1.19
DNMT1-213ENST00000587604 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
DNMT1-213ENST00000587604 HERVK_113P61574 105 aa7.64□□□□□ -1.19
DNMT1-213ENST00000587604 SPRR1BP22528 89 aa7.63□□□□□ -1.19
DNMT1-213ENST00000587604 NDUFA5Q16718 116 aa7.63□□□□□ -1.19
DNMT1-213ENST00000587604 SLC25A34Q6PIV7 304 aa7.63□□□□□ -1.19
DNMT1-213ENST00000587604 SOSTDC1Q6X4U4 206 aa7.63□□□□□ -1.19
DNMT1-213ENST00000587604 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
DNMT1-213ENST00000587604 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
DNMT1-213ENST00000587604 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
DNMT1-213ENST00000587604 DPM2O94777 84 aa7.62□□□□□ -1.19
DNMT1-213ENST00000587604 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
DNMT1-213ENST00000587604 NPC2P61916 151 aa7.61□□□□□ -1.19
DNMT1-213ENST00000587604 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
DNMT1-213ENST00000587604 A0A0J9YXY3 114 aa7.6□□□□□ -1.19
DNMT1-213ENST00000587604 IGKCP01834 107 aa7.59□□□□□ -1.19
DNMT1-213ENST00000587604 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
DNMT1-213ENST00000587604 PMCHL2Q9BQD1 86 aa7.59□□□□□ -1.19
DNMT1-213ENST00000587604 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
DNMT1-213ENST00000587604 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
DNMT1-213ENST00000587604 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
DNMT1-213ENST00000587604 SERF1AO75920 110 aa7.58□□□□□ -1.2
DNMT1-213ENST00000587604 LINC00310P59036 64 aa7.58□□□□□ -1.2
DNMT1-213ENST00000587604 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
DNMT1-213ENST00000587604 CD164Q04900 197 aa7.57□□□□□ -1.2
DNMT1-213ENST00000587604 TRGC2P03986 189 aa7.56□□□□□ -1.2
DNMT1-213ENST00000587604 FABP4P15090 132 aa7.56□□□□□ -1.2
DNMT1-213ENST00000587604 OR13C6PQ8NH95 151 aa7.56□□□□□ -1.2
DNMT1-213ENST00000587604 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
DNMT1-213ENST00000587604 E9PLD3 99 aa7.55□□□□□ -1.2
DNMT1-213ENST00000587604 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
DNMT1-213ENST00000587604 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
DNMT1-213ENST00000587604 TAL2Q16559 108 aa7.53□□□□□ -1.2
DNMT1-213ENST00000587604 Q5XG85 94 aa7.53□□□□□ -1.2
DNMT1-213ENST00000587604 LITAFQ99732 161 aa7.53□□□□□ -1.2
DNMT1-213ENST00000587604 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
DNMT1-213ENST00000587604 M0R2T5 61 aa7.52□□□□□ -1.21
DNMT1-213ENST00000587604 COX7BP24311 80 aa7.52□□□□□ -1.21
DNMT1-213ENST00000587604 ELOF1P60002 83 aaKnown RBP7.52□□□□□ -1.21
DNMT1-213ENST00000587604 Q1RN00 199 aa7.52□□□□□ -1.21
DNMT1-213ENST00000587604 TEX49A0A1B0GTD5 131 aa7.51□□□□□ -1.21
DNMT1-213ENST00000587604 H7C2G1 150 aa7.51□□□□□ -1.21
DNMT1-213ENST00000587604 TIMM17BO60830 172 aa7.51□□□□□ -1.21
DNMT1-213ENST00000587604 DEFB105AQ8NG35 78 aa7.51□□□□□ -1.21
DNMT1-213ENST00000587604 AKR1D1P51857 326 aa7.5□□□□□ -1.21
DNMT1-213ENST00000587604 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
DNMT1-213ENST00000587604 C1orf195Q5TG92 126 aa7.5□□□□□ -1.21
DNMT1-213ENST00000587604 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
DNMT1-213ENST00000587604 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
DNMT1-213ENST00000587604 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
DNMT1-213ENST00000587604 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
DNMT1-213ENST00000587604 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.21
DNMT1-213ENST00000587604 TRBV7-6A0A0J9YX20 115 aa7.46□□□□□ -1.22
DNMT1-213ENST00000587604 IGLV5-48A0A075B6I7 105 aa7.44□□□□□ -1.22
DNMT1-213ENST00000587604 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
DNMT1-213ENST00000587604 SYS1-DBNDD2H3BUS1 97 aa7.44□□□□□ -1.22
DNMT1-213ENST00000587604 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
DNMT1-213ENST00000587604 A0A1B0GWB2 263 aa7.43□□□□□ -1.22
DNMT1-213ENST00000587604 TCL1BO95988 128 aa7.41□□□□□ -1.22
DNMT1-213ENST00000587604 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
DNMT1-213ENST00000587604 COLCA2A8K830 154 aa7.4□□□□□ -1.22
DNMT1-213ENST00000587604 TTTY13Q9BZ97 58 aa7.4□□□□□ -1.22
DNMT1-213ENST00000587604 A4D1N5 150 aa7.38□□□□□ -1.23
DNMT1-213ENST00000587604 PET117Q6UWS5 81 aa7.38□□□□□ -1.23
DNMT1-213ENST00000587604 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
DNMT1-213ENST00000587604 A6NDN8 102 aa7.37□□□□□ -1.23
DNMT1-213ENST00000587604 IFITM1P13164 125 aa7.36□□□□□ -1.23
DNMT1-213ENST00000587604 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
DNMT1-213ENST00000587604 NHP2Q9NX24 153 aaKnown RBP7.36□□□□□ -1.23
DNMT1-213ENST00000587604 Q6ZVH6 145 aa7.34□□□□□ -1.23
DNMT1-213ENST00000587604 F8WEM9 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
DNMT1-213ENST00000587604 Q6Q795 121 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 ATP11AUNQ6ZP68 121 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 MUSTN1Q8IVN3 82 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
DNMT1-213ENST00000587604 C3orf79P0CE67 100 aa7.31□□□□□ -1.24
DNMT1-213ENST00000587604 PCP2Q8IVA1 136 aa7.31□□□□□ -1.24
DNMT1-213ENST00000587604 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
DNMT1-213ENST00000587604 TRAV13-2A0A0B4J235 113 aa7.3□□□□□ -1.24
DNMT1-213ENST00000587604 Q75L30 129 aa7.3□□□□□ -1.24
DNMT1-213ENST00000587604 Q6JHZ5 121 aa7.29□□□□□ -1.24
DNMT1-213ENST00000587604 TRBV7-7A0A0K0K1E9 115 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms