RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 LST1O00453 97 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 ZNF73O43830 326 aaPredicted RBP3.99□□□□□ -1.77
LIG3-206ENST00000586058 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 TRACP01848 142 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 SLPIP03973 132 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 COX7BP24311 80 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
LIG3-206ENST00000586058 C6orf99Q4VX62 202 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 TRBV7-6A0A0J9YX20 115 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 C9JAW5 83 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 H3BQ85 93 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 H3BT86 120 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 C7orf33Q8WU49 177 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
LIG3-206ENST00000586058 J3QR89 54 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 ORMDL1Q9P0S3 153 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
LIG3-206ENST00000586058 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 RPL37AP8A6NKH3 93 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 H3BS24 57 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
LIG3-206ENST00000586058 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 SPACA4Q8TDM5 124 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
LIG3-206ENST00000586058 DNAH7Q8WXX0 4024 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 CHTF8P0CG12 524 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 ANKRD29Q8N6D5 301 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 Q8NDZ9 215 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 TENM2Q9NT68 2774 aa3.95□□□□□ -1.78
LIG3-206ENST00000586058 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 A0A087WYN8 130 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 UBE2AP49459 152 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 Q6ZRX8 168 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 MTURNQ8N3F0 131 aa3.94□□□□□ -1.78
LIG3-206ENST00000586058 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 K7ERU9 68 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 INAFM2P0DMQ5 153 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.93□□□□□ -1.78
LIG3-206ENST00000586058 LINC00575Q6W349 94 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 LYSTQ99698 3801 aa3.93□□□□□ -1.78
LIG3-206ENST00000586058 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
LIG3-206ENST00000586058 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 Q6ZQY7 126 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 PHF5AQ7RTV0 110 aaKnown RBP3.92□□□□□ -1.78
LIG3-206ENST00000586058 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 STARD9Q9P2P6 4700 aa3.92□□□□□ -1.78
LIG3-206ENST00000586058 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 F8WEM9 126 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 SPRR1AP35321 89 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 PLAC8Q9NZF1 115 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 TGP01266 2768 aa3.91□□□□□ -1.78
LIG3-206ENST00000586058 B5MCH6 92 aa3.9□□□□□ -1.79
LIG3-206ENST00000586058 BCE1O60756 84 aa3.9□□□□□ -1.79
LIG3-206ENST00000586058 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
LIG3-206ENST00000586058 PRO0461Q9UI25 63 aa3.9□□□□□ -1.79
LIG3-206ENST00000586058 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.79
LIG3-206ENST00000586058 H0Y9J4 135 aa3.89□□□□□ -1.79
LIG3-206ENST00000586058 FUSP35637 526 aaKnown RBP eCLIP3.89□□□□□ -1.79
LIG3-206ENST00000586058 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
LIG3-206ENST00000586058 PRLHP81277 87 aa3.89□□□□□ -1.79
LIG3-206ENST00000586058 A0A1B0GV72 72 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 C1orf137Q5JT78 98 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 DEFB105AQ8NG35 78 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 LINC01600Q96MT4 127 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 DSCR8Q96T75 97 aa3.88□□□□□ -1.79
LIG3-206ENST00000586058 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 PANO1I0J062 215 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 SCGB1A1P11684 91 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 PDE6GP18545 87 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 RBM3P98179 157 aaKnown RBP3.87□□□□□ -1.79
LIG3-206ENST00000586058 SCXQ7RTU7 201 aa3.87□□□□□ -1.79
LIG3-206ENST00000586058 KRTAP4-16G5E9R7 235 aaPredicted RBP3.86□□□□□ -1.79
LIG3-206ENST00000586058 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
LIG3-206ENST00000586058 Q6ZSA8 131 aa3.86□□□□□ -1.79
LIG3-206ENST00000586058 CIRBP-AS1Q8TBR5 109 aa3.86□□□□□ -1.79
LIG3-206ENST00000586058 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
LIG3-206ENST00000586058 ACYP1P07311 99 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 KRTAP10-1P60331 282 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 SMCR5Q8TEV8 140 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms