RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
SDF2-202ENST00000585428 LEPROTO15243 131 aa7.89□□□□□ -1.15
SDF2-202ENST00000585428 JOSD1Q15040 202 aaPredicted RBP7.89□□□□□ -1.15
SDF2-202ENST00000585428 C5orf52A6NGY3 159 aa7.88□□□□□ -1.15
SDF2-202ENST00000585428 ST20-AS1Q8NBB2 130 aa7.88□□□□□ -1.15
SDF2-202ENST00000585428 YPEL4Q96NS1 127 aa7.88□□□□□ -1.15
SDF2-202ENST00000585428 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
SDF2-202ENST00000585428 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
SDF2-202ENST00000585428 C9orf153Q5TBE3 101 aa7.87□□□□□ -1.15
SDF2-202ENST00000585428 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
SDF2-202ENST00000585428 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
SDF2-202ENST00000585428 J3QQQ9 107 aa7.86□□□□□ -1.15
SDF2-202ENST00000585428 ZNF73O43830 326 aaPredicted RBP7.86□□□□□ -1.15
SDF2-202ENST00000585428 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
SDF2-202ENST00000585428 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 HSBP1O75506 76 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 APOC3P02656 99 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 SPRR1BP22528 89 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 NMUP48645 174 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 MIEN1Q9BRT3 115 aa7.84□□□□□ -1.15
SDF2-202ENST00000585428 H0Y8G0 127 aa7.83□□□□□ -1.16
SDF2-202ENST00000585428 SNAPINO95295 136 aa7.83□□□□□ -1.16
SDF2-202ENST00000585428 PLNP26678 52 aa7.83□□□□□ -1.16
SDF2-202ENST00000585428 LINC00310P59036 64 aa7.83□□□□□ -1.16
SDF2-202ENST00000585428 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
SDF2-202ENST00000585428 SVBPQ8N300 66 aa7.82□□□□□ -1.16
SDF2-202ENST00000585428 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
SDF2-202ENST00000585428 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SDF2-202ENST00000585428 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
SDF2-202ENST00000585428 HRCT1Q6UXD1 115 aa7.8□□□□□ -1.16
SDF2-202ENST00000585428 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
SDF2-202ENST00000585428 DPM2O94777 84 aa7.79□□□□□ -1.16
SDF2-202ENST00000585428 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
SDF2-202ENST00000585428 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
SDF2-202ENST00000585428 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
SDF2-202ENST00000585428 HERVK_113P61574 105 aa7.78□□□□□ -1.16
SDF2-202ENST00000585428 SLC25A34Q6PIV7 304 aa7.78□□□□□ -1.16
SDF2-202ENST00000585428 CBY1Q9Y3M2 126 aa7.78□□□□□ -1.16
SDF2-202ENST00000585428 IGKCP01834 107 aa7.77□□□□□ -1.17
SDF2-202ENST00000585428 NPC2P61916 151 aa7.77□□□□□ -1.17
SDF2-202ENST00000585428 PMCHL2Q9BQD1 86 aa7.77□□□□□ -1.17
SDF2-202ENST00000585428 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
SDF2-202ENST00000585428 SERF1AO75920 110 aa7.76□□□□□ -1.17
SDF2-202ENST00000585428 CD164Q04900 197 aa7.76□□□□□ -1.17
SDF2-202ENST00000585428 NDUFA5Q16718 116 aa7.76□□□□□ -1.17
SDF2-202ENST00000585428 LAMTOR3Q9UHA4 124 aa7.76□□□□□ -1.17
SDF2-202ENST00000585428 TRGC2P03986 189 aa7.75□□□□□ -1.17
SDF2-202ENST00000585428 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
SDF2-202ENST00000585428 FABP4P15090 132 aa7.74□□□□□ -1.17
SDF2-202ENST00000585428 Q5XG85 94 aa7.74□□□□□ -1.17
SDF2-202ENST00000585428 LITAFQ99732 161 aa7.74□□□□□ -1.17
SDF2-202ENST00000585428 E9PLD3 99 aa7.73□□□□□ -1.17
SDF2-202ENST00000585428 LINC00308Q8TCZ7 52 aa7.73□□□□□ -1.17
SDF2-202ENST00000585428 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
SDF2-202ENST00000585428 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
SDF2-202ENST00000585428 PRO1933Q9H354 126 aa7.72□□□□□ -1.17
SDF2-202ENST00000585428 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
SDF2-202ENST00000585428 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
SDF2-202ENST00000585428 TAL2Q16559 108 aa7.7□□□□□ -1.18
SDF2-202ENST00000585428 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
SDF2-202ENST00000585428 TEX49A0A1B0GTD5 131 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 H7C2G1 150 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 TIMM17BO60830 172 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 COX7BP24311 80 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 AKR1D1P51857 326 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 Q1RN00 199 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 DEFB105AQ8NG35 78 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 SPANXDQ9BXN6 97 aa7.69□□□□□ -1.18
SDF2-202ENST00000585428 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
SDF2-202ENST00000585428 M0R2T5 61 aa7.68□□□□□ -1.18
SDF2-202ENST00000585428 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
SDF2-202ENST00000585428 C6orf99Q4VX62 202 aa7.68□□□□□ -1.18
SDF2-202ENST00000585428 LINC00518Q8N0U6 118 aa7.67□□□□□ -1.18
SDF2-202ENST00000585428 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.18
SDF2-202ENST00000585428 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
SDF2-202ENST00000585428 A0A0G2JQZ4 141 aa7.64□□□□□ -1.19
SDF2-202ENST00000585428 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
SDF2-202ENST00000585428 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
SDF2-202ENST00000585428 SYS1-DBNDD2H3BUS1 97 aa7.62□□□□□ -1.19
SDF2-202ENST00000585428 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
SDF2-202ENST00000585428 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
SDF2-202ENST00000585428 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
SDF2-202ENST00000585428 COLCA2A8K830 154 aa7.6□□□□□ -1.19
SDF2-202ENST00000585428 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
SDF2-202ENST00000585428 A0A1B0GWB2 263 aa7.59□□□□□ -1.19
SDF2-202ENST00000585428 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
SDF2-202ENST00000585428 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
SDF2-202ENST00000585428 TCL1BO95988 128 aa7.56□□□□□ -1.2
SDF2-202ENST00000585428 A4D1N5 150 aa7.55□□□□□ -1.2
SDF2-202ENST00000585428 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
SDF2-202ENST00000585428 A6NDN8 102 aa7.53□□□□□ -1.2
SDF2-202ENST00000585428 IFITM1P13164 125 aa7.53□□□□□ -1.2
SDF2-202ENST00000585428 MUSTN1Q8IVN3 82 aa7.51□□□□□ -1.21
SDF2-202ENST00000585428 COPS9Q8WXC6 57 aa7.51□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms