RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NBDYA0A0U1RRE5 68 aa14.63□□□□□ -0.07
CCDC47-204ENST00000582252 DNAH6Q9C0G6 4158 aa14.62□□□□□ -0.07
CCDC47-204ENST00000582252 PRYO14603 147 aa14.61□□□□□ -0.07
CCDC47-204ENST00000582252 LINC00528Q8N1L1 170 aa14.61□□□□□ -0.07
CCDC47-204ENST00000582252 PKIGQ9Y2B9 76 aa14.6□□□□□ -0.07
CCDC47-204ENST00000582252 LAMTOR3Q9UHA4 124 aa14.59□□□□□ -0.07
CCDC47-204ENST00000582252 Q6Q795 121 aa14.58□□□□□ -0.07
CCDC47-204ENST00000582252 LINC00643Q86TS7 51 aa14.58□□□□□ -0.07
CCDC47-204ENST00000582252 KMT2AQ03164 3969 aa14.58□□□□□ -0.08
CCDC47-204ENST00000582252 CCKP06307 115 aa14.58□□□□□ -0.08
CCDC47-204ENST00000582252 LINC00476Q8WZB0 136 aa14.58□□□□□ -0.08
CCDC47-204ENST00000582252 SDIM1Q6ZPB5 146 aa14.57□□□□□ -0.08
CCDC47-204ENST00000582252 FAM168BA1KXE4 195 aa14.56□□□□□ -0.08
CCDC47-204ENST00000582252 LY6G6CO95867 125 aa14.56□□□□□ -0.08
CCDC47-204ENST00000582252 RBM3P98179 157 aaKnown RBP14.56□□□□□ -0.08
CCDC47-204ENST00000582252 MRPL55Q7Z7F7 128 aaKnown RBP14.56□□□□□ -0.08
CCDC47-204ENST00000582252 DNAH10Q8IVF4 4471 aa14.56□□□□□ -0.08
CCDC47-204ENST00000582252 IGLV1-50A0A075B6I6 118 aa14.55□□□□□ -0.08
CCDC47-204ENST00000582252 A0A1B0GV72 72 aa14.55□□□□□ -0.08
CCDC47-204ENST00000582252 C16orf90A8MZG2 172 aa14.55□□□□□ -0.08
CCDC47-204ENST00000582252 FAM19A5Q7Z5A7 132 aaPredicted RBP14.55□□□□□ -0.08
CCDC47-204ENST00000582252 SMCR5Q8TEV8 140 aa14.52□□□□□ -0.09
CCDC47-204ENST00000582252 DHRS4-AS1Q9P1J3 65 aa14.52□□□□□ -0.09
CCDC47-204ENST00000582252 ETDCA0A1B0GVM5 59 aa14.51□□□□□ -0.09
CCDC47-204ENST00000582252 RPL37AP8A6NKH3 93 aa14.51□□□□□ -0.09
CCDC47-204ENST00000582252 PDE6GP18545 87 aa14.51□□□□□ -0.09
CCDC47-204ENST00000582252 LOC110117498A0A087WWA1 95 aa14.5□□□□□ -0.09
CCDC47-204ENST00000582252 TRBV7-7A0A0K0K1E9 115 aa14.5□□□□□ -0.09
CCDC47-204ENST00000582252 SPRR1AP35321 89 aa14.5□□□□□ -0.09
CCDC47-204ENST00000582252 DSCR8Q96T75 97 aa14.5□□□□□ -0.09
CCDC47-204ENST00000582252 IMUPQ9GZP8 106 aa14.5□□□□□ -0.09
CCDC47-204ENST00000582252 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.49□□□□□ -0.09
CCDC47-204ENST00000582252 KRTAP7-1Q8IUC3 87 aa14.49□□□□□ -0.09
CCDC47-204ENST00000582252 A0A096LNI7 61 aa14.49□□□□□ -0.09
CCDC47-204ENST00000582252 M0R2N4 97 aa14.49□□□□□ -0.09
CCDC47-204ENST00000582252 Q6ZR54 194 aa14.49□□□□□ -0.09
CCDC47-204ENST00000582252 LRCOL1A6NCL2 159 aa14.48□□□□□ -0.09
CCDC47-204ENST00000582252 Q6ZRX8 168 aa14.48□□□□□ -0.09
CCDC47-204ENST00000582252 DNAH2Q9P225 4427 aa14.47□□□□□ -0.09
CCDC47-204ENST00000582252 B5MCH6 92 aa14.46□□□□□ -0.09
CCDC47-204ENST00000582252 IGKV2-24A0A0C4DH68 120 aa14.46□□□□□ -0.1
CCDC47-204ENST00000582252 KRTAP4-16G5E9R7 235 aaPredicted RBP14.46□□□□□ -0.1
CCDC47-204ENST00000582252 Q6ZRN7 208 aaPredicted RBP14.46□□□□□ -0.1
CCDC47-204ENST00000582252 LINC00846Q9NV44 126 aa14.46□□□□□ -0.1
CCDC47-204ENST00000582252 Q6ZQT0 140 aa14.45□□□□□ -0.1
CCDC47-204ENST00000582252 NDUFV3P56181 108 aaKnown RBP14.44□□□□□ -0.1
CCDC47-204ENST00000582252 C9orf163Q8N9P6 203 aa14.44□□□□□ -0.1
CCDC47-204ENST00000582252 SACSQ9NZJ4 4579 aa14.43□□□□□ -0.1
CCDC47-204ENST00000582252 REG3GQ6UW15 175 aa14.43□□□□□ -0.1
CCDC47-204ENST00000582252 Q6JHZ5 121 aa14.41□□□□□ -0.1
CCDC47-204ENST00000582252 LINC00474Q9P2X8 69 aa14.41□□□□□ -0.1
CCDC47-204ENST00000582252 TRBV7-4A0A0J9YYF1 115 aa14.38□□□□□ -0.11
CCDC47-204ENST00000582252 A0A1W2PNN7 141 aa14.38□□□□□ -0.11
CCDC47-204ENST00000582252 UBL5Q9BZL1 73 aa14.38□□□□□ -0.11
CCDC47-204ENST00000582252 C1orf134Q5TEV5 83 aa14.37□□□□□ -0.11
CCDC47-204ENST00000582252 Q9BRP9 147 aa14.36□□□□□ -0.11
CCDC47-204ENST00000582252 UBE2BP63146 152 aa14.35□□□□□ -0.11
CCDC47-204ENST00000582252 ATP5EP2Q5VTU8 51 aa14.35□□□□□ -0.11
CCDC47-204ENST00000582252 HYDINQ4G0P3 5121 aa14.35□□□□□ -0.11
CCDC47-204ENST00000582252 DNAH17Q9UFH2 4485 aa14.34□□□□□ -0.11
CCDC47-204ENST00000582252 ANAPC13Q9BS18 74 aa14.34□□□□□ -0.11
CCDC47-204ENST00000582252 Q8N377 158 aa14.32□□□□□ -0.12
CCDC47-204ENST00000582252 DEFB105AQ8NG35 78 aa14.32□□□□□ -0.12
CCDC47-204ENST00000582252 LCE6AA0A183 80 aa14.32□□□□□ -0.12
CCDC47-204ENST00000582252 FRAS1Q86XX4 4008 aa14.31□□□□□ -0.12
CCDC47-204ENST00000582252 A0A087WTM6 91 aa14.3□□□□□ -0.12
CCDC47-204ENST00000582252 IGLV5-48A0A075B6I7 105 aa14.29□□□□□ -0.12
CCDC47-204ENST00000582252 CHTF8P0CG12 524 aa14.29□□□□□ -0.12
CCDC47-204ENST00000582252 LINC01547P58512 204 aaPredicted RBP14.29□□□□□ -0.12
CCDC47-204ENST00000582252 FAM19A1Q7Z5A9 133 aa14.28□□□□□ -0.12
CCDC47-204ENST00000582252 IGKV3D-7A0A0C4DH55 119 aa14.27□□□□□ -0.12
CCDC47-204ENST00000582252 PHF5AQ7RTV0 110 aaKnown RBP14.25□□□□□ -0.13
CCDC47-204ENST00000582252 FAM236AA0A1B0GUQ0 79 aa14.24□□□□□ -0.13
CCDC47-204ENST00000582252 FAM236BA0A1B0GV22 79 aa14.24□□□□□ -0.13
CCDC47-204ENST00000582252 ST20-AS1Q8NBB2 130 aa14.23□□□□□ -0.13
CCDC47-204ENST00000582252 ERC2-IT1O76042 136 aa14.22□□□□□ -0.13
CCDC47-204ENST00000582252 DPH3Q96FX2 82 aa14.21□□□□□ -0.13
CCDC47-204ENST00000582252 H0Y9J4 135 aa14.21□□□□□ -0.14
CCDC47-204ENST00000582252 Q6ZVQ6 151 aa14.2□□□□□ -0.14
CCDC47-204ENST00000582252 SPACA4Q8TDM5 124 aa14.2□□□□□ -0.14
CCDC47-204ENST00000582252 HECTD4Q9Y4D8 3996 aa14.2□□□□□ -0.14
CCDC47-204ENST00000582252 RTL8CO15255 209 aa14.18□□□□□ -0.14
CCDC47-204ENST00000582252 PRLHP81277 87 aa14.18□□□□□ -0.14
CCDC47-204ENST00000582252 KMT2CQ8NEZ4 4911 aaKnown RBP14.18□□□□□ -0.14
CCDC47-204ENST00000582252 A0A1B0GW54 56 aa14.18□□□□□ -0.14
CCDC47-204ENST00000582252 FAT2Q9NYQ8 4349 aa14.18□□□□□ -0.14
CCDC47-204ENST00000582252 TNP2Q05952 138 aa14.17□□□□□ -0.14
CCDC47-204ENST00000582252 F8WEM9 126 aa14.15□□□□□ -0.14
CCDC47-204ENST00000582252 HIGD2AQ9BW72 106 aa14.15□□□□□ -0.14
CCDC47-204ENST00000582252 HIST1H4AP62805 103 aaKnown RBP14.15□□□□□ -0.14
CCDC47-204ENST00000582252 C3orf22Q8N5N4 141 aa14.15□□□□□ -0.14
CCDC47-204ENST00000582252 RYR2Q92736 4967 aa14.14□□□□□ -0.15
CCDC47-204ENST00000582252 EPM2AB3EWF7 344 aa14.14□□□□□ -0.15
CCDC47-204ENST00000582252 FUSP35637 526 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC47-204ENST00000582252 UBE2AP49459 152 aa14.13□□□□□ -0.15
CCDC47-204ENST00000582252 CXCL6P80162 114 aa14.13□□□□□ -0.15
CCDC47-204ENST00000582252 HAMPP81172 84 aa14.13□□□□□ -0.15
CCDC47-204ENST00000582252 C1orf137Q5JT78 98 aa14.13□□□□□ -0.15
CCDC47-204ENST00000582252 DNAH11Q96DT5 4516 aa14.13□□□□□ -0.15
CCDC47-204ENST00000582252 PANO1I0J062 215 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1758.5 ms