RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 SPRR1AP35321 89 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 RPL37AP61513 92 aaKnown RBP2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 BOD1L2Q8IYS8 172 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 SPANXDQ9BXN6 97 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 SPANXCQ9NY87 97 aa2.3□□□□□ -2.04
SMARCE1-215ENST00000578995 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 ZNF815PA8K554 130 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 DLEU1O43261 78 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 NDUFC2O95298 119 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 COX8AP10176 69 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 AKR1D1P51857 326 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 LINC00158P58513 81 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 MRPL55Q7Z7F7 128 aaKnown RBP2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 LINC00308Q8TCZ7 52 aa2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 SPANXB1Q9NS25 103 aaPredicted RBP2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 DMBT1Q9UGM3 2413 aaPredicted RBP2.29□□□□□ -2.04
SMARCE1-215ENST00000578995 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 TMEM238C9JI98 176 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 M0R378 163 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 SCGB1D1O95968 90 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 IGLV6-57P01721 117 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 IGLV7-43P04211 117 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 MEIG1Q5JSS6 88 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 LINC00337Q8N6G1 96 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 KCNQ1DNQ9H478 68 aa2.28□□□□□ -2.04
SMARCE1-215ENST00000578995 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 GAGE10A6NGK3 116 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 RPL37AP8A6NKH3 93 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 LINC00587B1AMM8 73 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 NCR3O14931 201 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 BCE1O60756 84 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 INAFM2P0DMQ5 153 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 NPC2P61916 151 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 SPATA45Q537H7 98 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 TMEM126AQ9H061 195 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 HIGD1BQ9P298 99 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 PAM16Q9Y3D7 125 aa2.27□□□□□ -2.05
SMARCE1-215ENST00000578995 B5MCH6 92 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 H0Y9J4 135 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 PRYO14603 147 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 RPL24P83731 157 aaKnown RBP2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 LBHQ53QV2 105 aaPredicted RBP2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 SPINK6Q6UWN8 80 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 Q6ZVH6 145 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 MUSTN1Q8IVN3 82 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 C14orf144Q96I85 54 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 VAMP8Q9BV40 100 aa2.26□□□□□ -2.05
SMARCE1-215ENST00000578995 ZNF861PO60384 105 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 SMIM6P0DI80 62 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 IFITM1P13164 125 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 UBE2BP63146 152 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 PRLHP81277 87 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 REG3GQ6UW15 175 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 SCGB1D4Q6XE38 83 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 NKAPP1Q8N9T2 125 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 SMCR5Q8TEV8 140 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 LINC01600Q96MT4 127 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 Q9BRP9 147 aa2.25□□□□□ -2.05
SMARCE1-215ENST00000578995 A0A087X002 238 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 A0A1B0GWB2 263 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 A4D1N5 150 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 HSBP1L1C9JCN9 74 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 ERC2-IT1O76042 136 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 OXTP01178 125 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 DDTP30046 118 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 FXYD2P54710 66 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 SLC25A34Q6PIV7 304 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 Q6ZRX8 168 aa2.24□□□□□ -2.05
SMARCE1-215ENST00000578995 TRAV23DV6A0A075B6W5 121 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 ZNF73O43830 326 aaPredicted RBP2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 CFC1BP0CG36 223 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 CFC1P0CG37 223 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 LINC01547P58512 204 aaPredicted RBP2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 ELOF1P60002 83 aaKnown RBP2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 TAL2Q16559 108 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 KRTAP13-2Q52LG2 175 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 DIRC1Q969H9 104 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 MIEN1Q9BRT3 115 aa2.23□□□□□ -2.05
SMARCE1-215ENST00000578995 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 SPRR1BP22528 89 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 RPL28P46779 137 aaKnown RBP2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 C6orf99Q4VX62 202 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 FAM19A1Q7Z5A9 133 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 LINC00518Q8N0U6 118 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 CEND1Q8N111 149 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 PRR26Q8N8Z3 221 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 SPRR4Q96PI1 79 aa2.22□□□□□ -2.05
SMARCE1-215ENST00000578995 PRO1933Q9H354 126 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms