RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 LGALS3P17931 250 aaKnown RBP4.95□□□□□ -1.62
GGA3-207ENST00000578896 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
GGA3-207ENST00000578896 SPANXB1Q9NS25 103 aaPredicted RBP4.95□□□□□ -1.62
GGA3-207ENST00000578896 TRAV23DV6A0A075B6W5 121 aa4.94□□□□□ -1.62
GGA3-207ENST00000578896 SLC25A20O43772 301 aa4.94□□□□□ -1.62
GGA3-207ENST00000578896 HRCT1Q6UXD1 115 aa4.94□□□□□ -1.62
GGA3-207ENST00000578896 MIEN1Q9BRT3 115 aa4.94□□□□□ -1.62
GGA3-207ENST00000578896 A0A0J9YXY3 114 aa4.93□□□□□ -1.62
GGA3-207ENST00000578896 IGKCP01834 107 aa4.93□□□□□ -1.62
GGA3-207ENST00000578896 PLNP26678 52 aa4.93□□□□□ -1.62
GGA3-207ENST00000578896 HERVK_113P61574 105 aa4.93□□□□□ -1.62
GGA3-207ENST00000578896 XP32Q5T750 250 aa4.93□□□□□ -1.62
GGA3-207ENST00000578896 ZNF73O43830 326 aaPredicted RBP4.92□□□□□ -1.62
GGA3-207ENST00000578896 NDUFC2O95298 119 aa4.92□□□□□ -1.62
GGA3-207ENST00000578896 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
GGA3-207ENST00000578896 NMUP48645 174 aa4.91□□□□□ -1.62
GGA3-207ENST00000578896 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
GGA3-207ENST00000578896 JOSD1Q15040 202 aaPredicted RBP4.91□□□□□ -1.62
GGA3-207ENST00000578896 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
GGA3-207ENST00000578896 C9orf92A6NGG3 77 aa4.9□□□□□ -1.63
GGA3-207ENST00000578896 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
GGA3-207ENST00000578896 PCOTHQ58A44 107 aa4.89□□□□□ -1.63
GGA3-207ENST00000578896 LINC00308Q8TCZ7 52 aa4.89□□□□□ -1.63
GGA3-207ENST00000578896 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
GGA3-207ENST00000578896 COLCA2A8K830 154 aa4.88□□□□□ -1.63
GGA3-207ENST00000578896 E9PLD3 99 aa4.88□□□□□ -1.63
GGA3-207ENST00000578896 LITAFQ99732 161 aa4.88□□□□□ -1.63
GGA3-207ENST00000578896 HINT1P49773 126 aaPredicted RBP4.87□□□□□ -1.63
GGA3-207ENST00000578896 Q1RN00 199 aa4.87□□□□□ -1.63
GGA3-207ENST00000578896 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
GGA3-207ENST00000578896 SLC7A5P1Q8MH63 180 aa4.87□□□□□ -1.63
GGA3-207ENST00000578896 DEFB105AQ8NG35 78 aa4.87□□□□□ -1.63
GGA3-207ENST00000578896 IGLV8-61A0A075B6I0 122 aa4.86□□□□□ -1.63
GGA3-207ENST00000578896 A0A0G2JQZ4 141 aa4.86□□□□□ -1.63
GGA3-207ENST00000578896 H7C2G1 150 aa4.86□□□□□ -1.63
GGA3-207ENST00000578896 SPRR1BP22528 89 aa4.86□□□□□ -1.63
GGA3-207ENST00000578896 SPANXCQ9NY87 97 aa4.86□□□□□ -1.63
GGA3-207ENST00000578896 SYS1-DBNDD2H3BUS1 97 aa4.85□□□□□ -1.63
GGA3-207ENST00000578896 COX7BP24311 80 aa4.85□□□□□ -1.63
GGA3-207ENST00000578896 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
GGA3-207ENST00000578896 LAMTOR3Q9UHA4 124 aa4.85□□□□□ -1.63
GGA3-207ENST00000578896 ZNF815PA8K554 130 aa4.84□□□□□ -1.63
GGA3-207ENST00000578896 MT1HP80294 61 aa4.84□□□□□ -1.63
GGA3-207ENST00000578896 TAL2Q16559 108 aa4.84□□□□□ -1.63
GGA3-207ENST00000578896 DHRS4-AS1Q9P1J3 65 aa4.84□□□□□ -1.63
GGA3-207ENST00000578896 C5orf52A6NGY3 159 aa4.83□□□□□ -1.64
GGA3-207ENST00000578896 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
GGA3-207ENST00000578896 LIMD2Q9BT23 127 aa4.83□□□□□ -1.64
GGA3-207ENST00000578896 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
GGA3-207ENST00000578896 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 TIMM17BO60830 172 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
GGA3-207ENST00000578896 LINC01545Q5VT33 79 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
GGA3-207ENST00000578896 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
GGA3-207ENST00000578896 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
GGA3-207ENST00000578896 PRO1933Q9H354 126 aa4.81□□□□□ -1.64
GGA3-207ENST00000578896 TEX49A0A1B0GTD5 131 aa4.8□□□□□ -1.64
GGA3-207ENST00000578896 C3orf79P0CE67 100 aa4.8□□□□□ -1.64
GGA3-207ENST00000578896 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
GGA3-207ENST00000578896 PET117Q6UWS5 81 aa4.8□□□□□ -1.64
GGA3-207ENST00000578896 ANKRD39Q53RE8 183 aa4.79□□□□□ -1.64
GGA3-207ENST00000578896 LINC00518Q8N0U6 118 aa4.79□□□□□ -1.64
GGA3-207ENST00000578896 A6NDN8 102 aa4.78□□□□□ -1.64
GGA3-207ENST00000578896 AKR1D1P51857 326 aa4.78□□□□□ -1.64
GGA3-207ENST00000578896 KRTDAPP60985 99 aa4.78□□□□□ -1.64
GGA3-207ENST00000578896 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
GGA3-207ENST00000578896 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
GGA3-207ENST00000578896 CD164Q04900 197 aa4.77□□□□□ -1.65
GGA3-207ENST00000578896 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
GGA3-207ENST00000578896 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
GGA3-207ENST00000578896 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
GGA3-207ENST00000578896 PCP2Q8IVA1 136 aa4.76□□□□□ -1.65
GGA3-207ENST00000578896 IGLV5-48A0A075B6I7 105 aa4.75□□□□□ -1.65
GGA3-207ENST00000578896 TRBV7-6A0A0J9YX20 115 aa4.75□□□□□ -1.65
GGA3-207ENST00000578896 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
GGA3-207ENST00000578896 RPL37P61927 97 aaKnown RBP4.75□□□□□ -1.65
GGA3-207ENST00000578896 M0R2T5 61 aa4.74□□□□□ -1.65
GGA3-207ENST00000578896 CFC1BP0CG36 223 aa4.74□□□□□ -1.65
GGA3-207ENST00000578896 Q5XG85 94 aa4.74□□□□□ -1.65
GGA3-207ENST00000578896 SMIM11BQ8TCY0 68 aa4.74□□□□□ -1.65
GGA3-207ENST00000578896 IFITM1P13164 125 aa4.73□□□□□ -1.65
GGA3-207ENST00000578896 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
GGA3-207ENST00000578896 C20orf202A1L168 122 aa4.71□□□□□ -1.66
GGA3-207ENST00000578896 COA6Q5JTJ3 125 aaKnown RBP4.71□□□□□ -1.66
GGA3-207ENST00000578896 TRAV13-2A0A0B4J235 113 aa4.7□□□□□ -1.66
GGA3-207ENST00000578896 TCL1BO95988 128 aa4.7□□□□□ -1.66
GGA3-207ENST00000578896 Q6ZVH6 145 aa4.7□□□□□ -1.66
GGA3-207ENST00000578896 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms