RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 Q6ZRX8 168 aa11.52□□□□□ -0.57
TSEN54-205ENST00000578415 LINC00587B1AMM8 73 aa11.51□□□□□ -0.57
TSEN54-205ENST00000578415 DDTP30046 118 aa11.51□□□□□ -0.57
TSEN54-205ENST00000578415 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
TSEN54-205ENST00000578415 LEPROTL1O95214 131 aa11.5□□□□□ -0.57
TSEN54-205ENST00000578415 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 S100A2P29034 98 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
TSEN54-205ENST00000578415 MYMXA0A1B0GTQ4 84 aa11.48□□□□□ -0.57
TSEN54-205ENST00000578415 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
TSEN54-205ENST00000578415 TSPEAR-AS2P59090 65 aa11.47□□□□□ -0.57
TSEN54-205ENST00000578415 C9orf153Q5TBE3 101 aa11.47□□□□□ -0.57
TSEN54-205ENST00000578415 C5orf52A6NGY3 159 aa11.46□□□□□ -0.57
TSEN54-205ENST00000578415 PCOTHQ58A44 107 aa11.45□□□□□ -0.58
TSEN54-205ENST00000578415 IGLV6-57P01721 117 aa11.44□□□□□ -0.58
TSEN54-205ENST00000578415 SPANXB1Q9NS25 103 aaPredicted RBP11.44□□□□□ -0.58
TSEN54-205ENST00000578415 H0Y8G0 127 aa11.43□□□□□ -0.58
TSEN54-205ENST00000578415 ST20-AS1Q8NBB2 130 aa11.43□□□□□ -0.58
TSEN54-205ENST00000578415 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
TSEN54-205ENST00000578415 HIST1H2BLQ99880 126 aa11.42□□□□□ -0.58
TSEN54-205ENST00000578415 IGLV8-61A0A075B6I0 122 aa11.41□□□□□ -0.58
TSEN54-205ENST00000578415 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
TSEN54-205ENST00000578415 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
TSEN54-205ENST00000578415 LORP23490 312 aaPredicted RBP11.39□□□□□ -0.59
TSEN54-205ENST00000578415 KRTDAPP60985 99 aa11.39□□□□□ -0.59
TSEN54-205ENST00000578415 S100A7L2Q5SY68 101 aa11.39□□□□□ -0.59
TSEN54-205ENST00000578415 LEPROTO15243 131 aa11.38□□□□□ -0.59
TSEN54-205ENST00000578415 NDUFC2O95298 119 aa11.38□□□□□ -0.59
TSEN54-205ENST00000578415 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
TSEN54-205ENST00000578415 ZNF73O43830 326 aaPredicted RBP11.37□□□□□ -0.59
TSEN54-205ENST00000578415 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
TSEN54-205ENST00000578415 MIEN1Q9BRT3 115 aa11.37□□□□□ -0.59
TSEN54-205ENST00000578415 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
TSEN54-205ENST00000578415 KRTAP10-6P60371 365 aaPredicted RBP11.36□□□□□ -0.59
TSEN54-205ENST00000578415 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
TSEN54-205ENST00000578415 J3QQQ9 107 aa11.34□□□□□ -0.59
TSEN54-205ENST00000578415 EIF4EBP3O60516 100 aaPredicted RBP11.34□□□□□ -0.59
TSEN54-205ENST00000578415 HRCT1Q6UXD1 115 aa11.34□□□□□ -0.59
TSEN54-205ENST00000578415 SOSTDC1Q6X4U4 206 aa11.34□□□□□ -0.59
TSEN54-205ENST00000578415 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
TSEN54-205ENST00000578415 LIMD2Q9BT23 127 aa11.34□□□□□ -0.59
TSEN54-205ENST00000578415 SPRR1BP22528 89 aa11.32□□□□□ -0.6
TSEN54-205ENST00000578415 C20orf202A1L168 122 aa11.31□□□□□ -0.6
TSEN54-205ENST00000578415 NMUP48645 174 aa11.31□□□□□ -0.6
TSEN54-205ENST00000578415 NPC2P61916 151 aa11.3□□□□□ -0.6
TSEN54-205ENST00000578415 DPM2O94777 84 aa11.29□□□□□ -0.6
TSEN54-205ENST00000578415 PLNP26678 52 aa11.29□□□□□ -0.6
TSEN54-205ENST00000578415 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
TSEN54-205ENST00000578415 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
TSEN54-205ENST00000578415 IGKCP01834 107 aa11.27□□□□□ -0.61
TSEN54-205ENST00000578415 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.61
TSEN54-205ENST00000578415 SCGB1D1O95968 90 aa11.26□□□□□ -0.61
TSEN54-205ENST00000578415 AKR1D1P51857 326 aa11.26□□□□□ -0.61
TSEN54-205ENST00000578415 HERVK_113P61574 105 aa11.26□□□□□ -0.61
TSEN54-205ENST00000578415 HINT1P49773 126 aaPredicted RBP11.25□□□□□ -0.61
TSEN54-205ENST00000578415 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
TSEN54-205ENST00000578415 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
TSEN54-205ENST00000578415 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
TSEN54-205ENST00000578415 LAMTOR3Q9UHA4 124 aa11.23□□□□□ -0.61
TSEN54-205ENST00000578415 DHRS4-AS1Q9P1J3 65 aa11.22□□□□□ -0.61
TSEN54-205ENST00000578415 CBY1Q9Y3M2 126 aa11.22□□□□□ -0.61
TSEN54-205ENST00000578415 FLGP20930 4061 aaPredicted RBP11.21□□□□□ -0.61
TSEN54-205ENST00000578415 M0R2T5 61 aa11.21□□□□□ -0.61
TSEN54-205ENST00000578415 CD164Q04900 197 aa11.2□□□□□ -0.62
TSEN54-205ENST00000578415 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 H7C2G1 150 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 Q1RN00 199 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 LITAFQ99732 161 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
TSEN54-205ENST00000578415 RPL37P61927 97 aaKnown RBP11.16□□□□□ -0.62
TSEN54-205ENST00000578415 Q5XG85 94 aa11.16□□□□□ -0.62
TSEN54-205ENST00000578415 LINC00308Q8TCZ7 52 aa11.16□□□□□ -0.62
TSEN54-205ENST00000578415 HSBP1L1C9JCN9 74 aa11.15□□□□□ -0.62
TSEN54-205ENST00000578415 E9PLD3 99 aa11.15□□□□□ -0.62
TSEN54-205ENST00000578415 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
TSEN54-205ENST00000578415 PYY3Q5JQD4 70 aa11.15□□□□□ -0.62
TSEN54-205ENST00000578415 C1orf195Q5TG92 126 aa11.15□□□□□ -0.62
TSEN54-205ENST00000578415 PRO1933Q9H354 126 aa11.15□□□□□ -0.62
TSEN54-205ENST00000578415 COX6B2Q6YFQ2 88 aa11.14□□□□□ -0.63
TSEN54-205ENST00000578415 COX7BP24311 80 aa11.13□□□□□ -0.63
TSEN54-205ENST00000578415 DEFB105AQ8NG35 78 aa11.13□□□□□ -0.63
TSEN54-205ENST00000578415 SPANXDQ9BXN6 97 aa11.13□□□□□ -0.63
TSEN54-205ENST00000578415 TAL2Q16559 108 aa11.12□□□□□ -0.63
TSEN54-205ENST00000578415 ANKRD39Q53RE8 183 aa11.12□□□□□ -0.63
TSEN54-205ENST00000578415 C6orf99Q4VX62 202 aa11.11□□□□□ -0.63
TSEN54-205ENST00000578415 SMIM29Q86T20 159 aa11.11□□□□□ -0.63
TSEN54-205ENST00000578415 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
TSEN54-205ENST00000578415 A0A0G2JQZ4 141 aa11.09□□□□□ -0.63
TSEN54-205ENST00000578415 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
TSEN54-205ENST00000578415 TIMM17BO60830 172 aa11.08□□□□□ -0.64
TSEN54-205ENST00000578415 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
TSEN54-205ENST00000578415 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
TSEN54-205ENST00000578415 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
TSEN54-205ENST00000578415 SMIM6P0DI80 62 aa11.03□□□□□ -0.64
TSEN54-205ENST00000578415 LINC00518Q8N0U6 118 aa11.03□□□□□ -0.64
TSEN54-205ENST00000578415 IGLV5-48A0A075B6I7 105 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms