RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 NDUFC2O95298 119 aa9.17□□□□□ -0.94
TVP23A-209ENST00000575135 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
TVP23A-209ENST00000575135 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
TVP23A-209ENST00000575135 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
TVP23A-209ENST00000575135 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 TRGC2P03986 189 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 PLNP26678 52 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 NMUP48645 174 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 PCOTHQ58A44 107 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
TVP23A-209ENST00000575135 NPC2P61916 151 aa9.13□□□□□ -0.95
TVP23A-209ENST00000575135 MT1HP80294 61 aa9.13□□□□□ -0.95
TVP23A-209ENST00000575135 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
TVP23A-209ENST00000575135 HERVK_113P61574 105 aa9.12□□□□□ -0.95
TVP23A-209ENST00000575135 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
TVP23A-209ENST00000575135 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
TVP23A-209ENST00000575135 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
TVP23A-209ENST00000575135 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
TVP23A-209ENST00000575135 DPM2O94777 84 aa9.11□□□□□ -0.95
TVP23A-209ENST00000575135 HRCT1Q6UXD1 115 aa9.11□□□□□ -0.95
TVP23A-209ENST00000575135 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
TVP23A-209ENST00000575135 LINC00310P59036 64 aa9.1□□□□□ -0.95
TVP23A-209ENST00000575135 SERF1AO75920 110 aa9.09□□□□□ -0.95
TVP23A-209ENST00000575135 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
TVP23A-209ENST00000575135 A0A0J9YXY3 114 aa9.08□□□□□ -0.96
TVP23A-209ENST00000575135 IGKCP01834 107 aa9.08□□□□□ -0.96
TVP23A-209ENST00000575135 FABP4P15090 132 aa9.08□□□□□ -0.96
TVP23A-209ENST00000575135 SPRR1BP22528 89 aa9.08□□□□□ -0.96
TVP23A-209ENST00000575135 HINT1P49773 126 aaPredicted RBP9.08□□□□□ -0.96
TVP23A-209ENST00000575135 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
TVP23A-209ENST00000575135 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
TVP23A-209ENST00000575135 SLC25A34Q6PIV7 304 aa9.05□□□□□ -0.96
TVP23A-209ENST00000575135 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
TVP23A-209ENST00000575135 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
TVP23A-209ENST00000575135 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
TVP23A-209ENST00000575135 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
TVP23A-209ENST00000575135 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
TVP23A-209ENST00000575135 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
TVP23A-209ENST00000575135 E9PLD3 99 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BKO60814 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BJP06899 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BOP23527 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BBP33778 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BDP58876 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BCP62807 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST2H2BEQ16778 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BHQ93079 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BNQ99877 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 HIST1H2BMQ99879 126 aa9.01□□□□□ -0.97
TVP23A-209ENST00000575135 LITAFQ99732 161 aa9□□□□□ -0.97
TVP23A-209ENST00000575135 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
TVP23A-209ENST00000575135 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
TVP23A-209ENST00000575135 CD164Q04900 197 aa8.99□□□□□ -0.97
TVP23A-209ENST00000575135 Q1RN00 199 aa8.99□□□□□ -0.97
TVP23A-209ENST00000575135 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
TVP23A-209ENST00000575135 H7C2G1 150 aa8.98□□□□□ -0.97
TVP23A-209ENST00000575135 COX7BP24311 80 aa8.98□□□□□ -0.97
TVP23A-209ENST00000575135 TAL2Q16559 108 aa8.98□□□□□ -0.97
TVP23A-209ENST00000575135 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
TVP23A-209ENST00000575135 PRO1933Q9H354 126 aa8.98□□□□□ -0.97
TVP23A-209ENST00000575135 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
TVP23A-209ENST00000575135 COA6Q5JTJ3 125 aaKnown RBP8.97□□□□□ -0.97
TVP23A-209ENST00000575135 C6orf99Q4VX62 202 aa8.96□□□□□ -0.98
TVP23A-209ENST00000575135 TIMM17BO60830 172 aa8.95□□□□□ -0.98
TVP23A-209ENST00000575135 TEX49A0A1B0GTD5 131 aa8.94□□□□□ -0.98
TVP23A-209ENST00000575135 M0R2T5 61 aa8.94□□□□□ -0.98
TVP23A-209ENST00000575135 C1orf195Q5TG92 126 aa8.94□□□□□ -0.98
TVP23A-209ENST00000575135 Q5XG85 94 aa8.93□□□□□ -0.98
TVP23A-209ENST00000575135 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
TVP23A-209ENST00000575135 AKR1D1P51857 326 aa8.92□□□□□ -0.98
TVP23A-209ENST00000575135 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
TVP23A-209ENST00000575135 LINC00518Q8N0U6 118 aa8.92□□□□□ -0.98
TVP23A-209ENST00000575135 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
TVP23A-209ENST00000575135 RPL37P61927 97 aaKnown RBP8.91□□□□□ -0.98
TVP23A-209ENST00000575135 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
TVP23A-209ENST00000575135 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
TVP23A-209ENST00000575135 TTTY13Q9BZ97 58 aa8.9□□□□□ -0.98
TVP23A-209ENST00000575135 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
TVP23A-209ENST00000575135 S100A6P06703 90 aa8.88□□□□□ -0.99
TVP23A-209ENST00000575135 IGLV5-48A0A075B6I7 105 aa8.87□□□□□ -0.99
TVP23A-209ENST00000575135 LINC01545Q5VT33 79 aa8.87□□□□□ -0.99
TVP23A-209ENST00000575135 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
TVP23A-209ENST00000575135 A0A1B0GWB2 263 aa8.84□□□□□ -0.99
TVP23A-209ENST00000575135 S100A2P29034 98 aa8.83□□□□□ -1
TVP23A-209ENST00000575135 A6NDN8 102 aa8.82□□□□□ -1
TVP23A-209ENST00000575135 C20orf202A1L168 122 aa8.81□□□□□ -1
TVP23A-209ENST00000575135 TCL1BO95988 128 aa8.8□□□□□ -1
TVP23A-209ENST00000575135 C3orf79P0CE67 100 aa8.79□□□□□ -1
TVP23A-209ENST00000575135 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
TVP23A-209ENST00000575135 A4D1N5 150 aa8.78□□□□□ -1
TVP23A-209ENST00000575135 KRTDAPP60985 99 aa8.78□□□□□ -1
TVP23A-209ENST00000575135 HIST3H2BBQ8N257 126 aa8.78□□□□□ -1
TVP23A-209ENST00000575135 COPS9Q8WXC6 57 aa8.78□□□□□ -1
TVP23A-209ENST00000575135 IFITM1P13164 125 aa8.77□□□□□ -1.01
TVP23A-209ENST00000575135 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
TVP23A-209ENST00000575135 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
TVP23A-209ENST00000575135 HIST1H2BLQ99880 126 aa8.75□□□□□ -1.01
TVP23A-209ENST00000575135 NHP2Q9NX24 153 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms