RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 TGP01266 2768 aa18.57■□□□□ 0.56
CTDNEP1-208ENST00000573600 SDIM1Q6ZPB5 146 aa18.55■□□□□ 0.56
CTDNEP1-208ENST00000573600 LINC00474Q9P2X8 69 aa18.55■□□□□ 0.56
CTDNEP1-208ENST00000573600 DNAH6Q9C0G6 4158 aa18.53■□□□□ 0.56
CTDNEP1-208ENST00000573600 RPL37AP8A6NKH3 93 aa18.53■□□□□ 0.56
CTDNEP1-208ENST00000573600 LINC00528Q8N1L1 170 aa18.52■□□□□ 0.56
CTDNEP1-208ENST00000573600 TMEM256-PLSCR3K7ERE1 68 aa18.52■□□□□ 0.55
CTDNEP1-208ENST00000573600 A0A1W2PNN7 141 aa18.51■□□□□ 0.55
CTDNEP1-208ENST00000573600 ALMS1Q8TCU4 4167 aa18.5■□□□□ 0.55
CTDNEP1-208ENST00000573600 KMT2AQ03164 3969 aa18.49■□□□□ 0.55
CTDNEP1-208ENST00000573600 H3BQ85 93 aa18.49■□□□□ 0.55
CTDNEP1-208ENST00000573600 SPRR1AP35321 89 aa18.49■□□□□ 0.55
CTDNEP1-208ENST00000573600 CHTF8P0CG12 524 aa18.48■□□□□ 0.55
CTDNEP1-208ENST00000573600 VPS25Q9BRG1 176 aa18.48■□□□□ 0.55
CTDNEP1-208ENST00000573600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.47■□□□□ 0.55
CTDNEP1-208ENST00000573600 INAFM2P0DMQ5 153 aa18.46■□□□□ 0.55
CTDNEP1-208ENST00000573600 GHRHP01286 108 aa18.45■□□□□ 0.54
CTDNEP1-208ENST00000573600 Q6ZQY7 126 aa18.45■□□□□ 0.54
CTDNEP1-208ENST00000573600 KRTAP4-16G5E9R7 235 aaPredicted RBP18.44■□□□□ 0.54
CTDNEP1-208ENST00000573600 RTL8CO15255 209 aa18.44■□□□□ 0.54
CTDNEP1-208ENST00000573600 ETDCA0A1B0GVM5 59 aa18.43■□□□□ 0.54
CTDNEP1-208ENST00000573600 REG3GQ6UW15 175 aa18.41■□□□□ 0.54
CTDNEP1-208ENST00000573600 OBSCN-AS1Q96MR7 158 aa18.41■□□□□ 0.54
CTDNEP1-208ENST00000573600 B5MCH6 92 aa18.4■□□□□ 0.54
CTDNEP1-208ENST00000573600 Q6ZRX8 168 aa18.4■□□□□ 0.54
CTDNEP1-208ENST00000573600 DHRS4-AS1Q9P1J3 65 aa18.39■□□□□ 0.53
CTDNEP1-208ENST00000573600 DNAH2Q9P225 4427 aa18.39■□□□□ 0.53
CTDNEP1-208ENST00000573600 JMJD7-PLA2G4BH0Y9G9 81 aa18.37■□□□□ 0.53
CTDNEP1-208ENST00000573600 IGLV5-52A0A0A0MRZ9 124 aa18.36■□□□□ 0.53
CTDNEP1-208ENST00000573600 SPACA4Q8TDM5 124 aa18.36■□□□□ 0.53
CTDNEP1-208ENST00000573600 TNP2Q05952 138 aa18.35■□□□□ 0.53
CTDNEP1-208ENST00000573600 DPH3Q96FX2 82 aa18.35■□□□□ 0.53
CTDNEP1-208ENST00000573600 PHF5AQ7RTV0 110 aaKnown RBP18.34■□□□□ 0.53
CTDNEP1-208ENST00000573600 PANO1I0J062 215 aa18.33■□□□□ 0.52
CTDNEP1-208ENST00000573600 FAM240AA0A1B0GVK7 77 aa18.32■□□□□ 0.52
CTDNEP1-208ENST00000573600 UBE2BP63146 152 aa18.32■□□□□ 0.52
CTDNEP1-208ENST00000573600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.31■□□□□ 0.52
CTDNEP1-208ENST00000573600 EPM2AB3EWF7 344 aa18.3■□□□□ 0.52
CTDNEP1-208ENST00000573600 FUSP35637 526 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTDNEP1-208ENST00000573600 Q9BRP9 147 aa18.29■□□□□ 0.52
CTDNEP1-208ENST00000573600 C14orf132Q9NPU4 83 aa18.29■□□□□ 0.52
CTDNEP1-208ENST00000573600 DNAH17Q9UFH2 4485 aa18.28■□□□□ 0.52
CTDNEP1-208ENST00000573600 ACYP1P07311 99 aa18.27■□□□□ 0.52
CTDNEP1-208ENST00000573600 LAMTOR3Q9UHA4 124 aa18.27■□□□□ 0.52
CTDNEP1-208ENST00000573600 CDIP1Q9H305 208 aa18.26■□□□□ 0.51
CTDNEP1-208ENST00000573600 FAM19A1Q7Z5A9 133 aa18.23■□□□□ 0.51
CTDNEP1-208ENST00000573600 RBM3P98179 157 aaKnown RBP18.22■□□□□ 0.51
CTDNEP1-208ENST00000573600 HECTD4Q9Y4D8 3996 aa18.21■□□□□ 0.51
CTDNEP1-208ENST00000573600 A0A1B0GV72 72 aa18.2■□□□□ 0.5
CTDNEP1-208ENST00000573600 GAGE2AQ6NT46 116 aa18.2■□□□□ 0.5
CTDNEP1-208ENST00000573600 KRTAP11-1Q8IUC1 163 aa18.19■□□□□ 0.5
CTDNEP1-208ENST00000573600 NDUFV3P56181 108 aaKnown RBP18.18■□□□□ 0.5
CTDNEP1-208ENST00000573600 PLAC8Q9NZF1 115 aa18.18■□□□□ 0.5
CTDNEP1-208ENST00000573600 SMCR5Q8TEV8 140 aa18.17■□□□□ 0.5
CTDNEP1-208ENST00000573600 H0Y9J4 135 aa18.16■□□□□ 0.5
CTDNEP1-208ENST00000573600 CCKP06307 115 aa18.15■□□□□ 0.5
CTDNEP1-208ENST00000573600 SIGMAR1Q99720 223 aa18.15■□□□□ 0.5
CTDNEP1-208ENST00000573600 LINC01547P58512 204 aaPredicted RBP18.14■□□□□ 0.49
CTDNEP1-208ENST00000573600 PRLHP81277 87 aa18.14■□□□□ 0.49
CTDNEP1-208ENST00000573600 Q8N377 158 aa18.14■□□□□ 0.49
CTDNEP1-208ENST00000573600 DEFB105AQ8NG35 78 aa18.14■□□□□ 0.49
CTDNEP1-208ENST00000573600 FRAS1Q86XX4 4008 aa18.14■□□□□ 0.49
CTDNEP1-208ENST00000573600 IGLV5-48A0A075B6I7 105 aa18.13■□□□□ 0.49
CTDNEP1-208ENST00000573600 KRTAP10-2P60368 255 aa18.13■□□□□ 0.49
CTDNEP1-208ENST00000573600 LOC110117498A0A087WWA1 95 aa18.12■□□□□ 0.49
CTDNEP1-208ENST00000573600 LCE6AA0A183 80 aa18.12■□□□□ 0.49
CTDNEP1-208ENST00000573600 ERC2-IT1O76042 136 aa18.12■□□□□ 0.49
CTDNEP1-208ENST00000573600 DSCR8Q96T75 97 aa18.12■□□□□ 0.49
CTDNEP1-208ENST00000573600 PDE6GP18545 87 aa18.11■□□□□ 0.49
CTDNEP1-208ENST00000573600 BCE1O60756 84 aa18.09■□□□□ 0.49
CTDNEP1-208ENST00000573600 ST20-AS1Q8NBB2 130 aa18.09■□□□□ 0.49
CTDNEP1-208ENST00000573600 HYDINQ4G0P3 5121 aa18.09■□□□□ 0.49
CTDNEP1-208ENST00000573600 UBE2AP49459 152 aa18.07■□□□□ 0.48
CTDNEP1-208ENST00000573600 Q6ZQT0 140 aa18.07■□□□□ 0.48
CTDNEP1-208ENST00000573600 XGP55808 180 aa18.06■□□□□ 0.48
CTDNEP1-208ENST00000573600 HIGD2AQ9BW72 106 aa18.06■□□□□ 0.48
CTDNEP1-208ENST00000573600 C21orf62-AS1Q17RA5 79 aa18.05■□□□□ 0.48
CTDNEP1-208ENST00000573600 TRBV7-4A0A0J9YYF1 115 aa18.04■□□□□ 0.48
CTDNEP1-208ENST00000573600 MT-ATP8P03928 68 aa17.99■□□□□ 0.47
CTDNEP1-208ENST00000573600 KRTAP13-1Q8IUC0 172 aa17.99■□□□□ 0.47
CTDNEP1-208ENST00000573600 DNAH11Q96DT5 4516 aa17.98■□□□□ 0.47
CTDNEP1-208ENST00000573600 LINC00336Q6ZUF6 198 aa17.96■□□□□ 0.47
CTDNEP1-208ENST00000573600 LINC00846Q9NV44 126 aa17.95■□□□□ 0.46
CTDNEP1-208ENST00000573600 LINC00643Q86TS7 51 aa17.95■□□□□ 0.46
CTDNEP1-208ENST00000573600 PSORS1C2Q9UIG4 136 aa17.95■□□□□ 0.46
CTDNEP1-208ENST00000573600 C3orf22Q8N5N4 141 aa17.94■□□□□ 0.46
CTDNEP1-208ENST00000573600 FAM30AQ9NZY2 134 aa17.93■□□□□ 0.46
CTDNEP1-208ENST00000573600 SACSQ9NZJ4 4579 aa17.93■□□□□ 0.46
CTDNEP1-208ENST00000573600 Q6ZSA8 131 aa17.92■□□□□ 0.46
CTDNEP1-208ENST00000573600 FAT2Q9NYQ8 4349 aa17.92■□□□□ 0.46
CTDNEP1-208ENST00000573600 DNAH5Q8TE73 4624 aa17.92■□□□□ 0.46
CTDNEP1-208ENST00000573600 KRTAP10-1P60331 282 aa17.91■□□□□ 0.46
CTDNEP1-208ENST00000573600 SMIM29Q86T20 159 aa17.91■□□□□ 0.46
CTDNEP1-208ENST00000573600 CIRBP-AS1Q8TBR5 109 aa17.89■□□□□ 0.46
CTDNEP1-208ENST00000573600 SPRR1BP22528 89 aa17.89■□□□□ 0.45
CTDNEP1-208ENST00000573600 F8WEM9 126 aa17.88■□□□□ 0.45
CTDNEP1-208ENST00000573600 C1orf137Q5JT78 98 aa17.88■□□□□ 0.45
CTDNEP1-208ENST00000573600 PKD1P98161 4303 aa17.85■□□□□ 0.45
CTDNEP1-208ENST00000573600 DNAH8Q96JB1 4490 aa17.85■□□□□ 0.45
CTDNEP1-208ENST00000573600 SCXQ7RTU7 201 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms