RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
RPAIN-210ENST00000571613 IGKV2-24A0A0C4DH68 120 aa12.42□□□□□ -0.42
RPAIN-210ENST00000571613 SDIM1Q6ZPB5 146 aa12.41□□□□□ -0.42
RPAIN-210ENST00000571613 TMEM256-PLSCR3K7ERE1 68 aa12.4□□□□□ -0.42
RPAIN-210ENST00000571613 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
RPAIN-210ENST00000571613 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
RPAIN-210ENST00000571613 TEX49A0A1B0GTD5 131 aa12.38□□□□□ -0.43
RPAIN-210ENST00000571613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-210ENST00000571613 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
RPAIN-210ENST00000571613 DNAH6Q9C0G6 4158 aa12.37□□□□□ -0.43
RPAIN-210ENST00000571613 SPRR1AP35321 89 aa12.36□□□□□ -0.43
RPAIN-210ENST00000571613 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
RPAIN-210ENST00000571613 RPL37AP8A6NKH3 93 aa12.35□□□□□ -0.43
RPAIN-210ENST00000571613 ALMS1Q8TCU4 4167 aa12.34□□□□□ -0.43
RPAIN-210ENST00000571613 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
RPAIN-210ENST00000571613 RTL8CO15255 209 aa12.34□□□□□ -0.43
RPAIN-210ENST00000571613 TGP01266 2768 aa12.32□□□□□ -0.44
RPAIN-210ENST00000571613 DHRS4-AS1Q9P1J3 65 aa12.32□□□□□ -0.44
RPAIN-210ENST00000571613 KMT2AQ03164 3969 aa12.32□□□□□ -0.44
RPAIN-210ENST00000571613 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
RPAIN-210ENST00000571613 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-210ENST00000571613 JMJD7-PLA2G4BH0Y9G9 81 aa12.31□□□□□ -0.44
RPAIN-210ENST00000571613 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
RPAIN-210ENST00000571613 Q6ZQY7 126 aa12.31□□□□□ -0.44
RPAIN-210ENST00000571613 Q6ZRX8 168 aa12.3□□□□□ -0.44
RPAIN-210ENST00000571613 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
RPAIN-210ENST00000571613 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
RPAIN-210ENST00000571613 B5MCH6 92 aa12.29□□□□□ -0.44
RPAIN-210ENST00000571613 DPH3Q96FX2 82 aa12.29□□□□□ -0.44
RPAIN-210ENST00000571613 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
RPAIN-210ENST00000571613 OBSCN-AS1Q96MR7 158 aa12.28□□□□□ -0.44
RPAIN-210ENST00000571613 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
RPAIN-210ENST00000571613 UBE2BP63146 152 aa12.26□□□□□ -0.45
RPAIN-210ENST00000571613 TNP2Q05952 138 aa12.26□□□□□ -0.45
RPAIN-210ENST00000571613 FAM240AA0A1B0GVK7 77 aa12.25□□□□□ -0.45
RPAIN-210ENST00000571613 DNAH2Q9P225 4427 aa12.23□□□□□ -0.45
RPAIN-210ENST00000571613 ACYP1P07311 99 aa12.23□□□□□ -0.45
RPAIN-210ENST00000571613 PHF5AQ7RTV0 110 aaKnown RBP12.23□□□□□ -0.45
RPAIN-210ENST00000571613 LAMTOR3Q9UHA4 124 aa12.22□□□□□ -0.45
RPAIN-210ENST00000571613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-210ENST00000571613 PANO1I0J062 215 aa12.19□□□□□ -0.46
RPAIN-210ENST00000571613 Q9BRP9 147 aa12.19□□□□□ -0.46
RPAIN-210ENST00000571613 DNAH17Q9UFH2 4485 aa12.19□□□□□ -0.46
RPAIN-210ENST00000571613 H0Y9J4 135 aa12.18□□□□□ -0.46
RPAIN-210ENST00000571613 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
RPAIN-210ENST00000571613 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
RPAIN-210ENST00000571613 C21orf62-AS1Q17RA5 79 aa12.17□□□□□ -0.46
RPAIN-210ENST00000571613 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
RPAIN-210ENST00000571613 PLAC8Q9NZF1 115 aa12.17□□□□□ -0.46
RPAIN-210ENST00000571613 PDE6GP18545 87 aa12.16□□□□□ -0.46
RPAIN-210ENST00000571613 LCE6AA0A183 80 aa12.16□□□□□ -0.46
RPAIN-210ENST00000571613 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPAIN-210ENST00000571613 NDUFV3P56181 108 aaKnown RBP12.14□□□□□ -0.47
RPAIN-210ENST00000571613 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
RPAIN-210ENST00000571613 DSCR8Q96T75 97 aa12.13□□□□□ -0.47
RPAIN-210ENST00000571613 CDIP1Q9H305 208 aa12.13□□□□□ -0.47
RPAIN-210ENST00000571613 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
RPAIN-210ENST00000571613 BCE1O60756 84 aa12.12□□□□□ -0.47
RPAIN-210ENST00000571613 CCKP06307 115 aa12.12□□□□□ -0.47
RPAIN-210ENST00000571613 SMCR5Q8TEV8 140 aa12.12□□□□□ -0.47
RPAIN-210ENST00000571613 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
RPAIN-210ENST00000571613 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
RPAIN-210ENST00000571613 UBE2AP49459 152 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 Q8N377 158 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 PRLHP81277 87 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 LINC00336Q6ZUF6 198 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 KRTAP11-1Q8IUC1 163 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
RPAIN-210ENST00000571613 LINC01547P58512 204 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-210ENST00000571613 A0A1B0GV72 72 aa12.08□□□□□ -0.48
RPAIN-210ENST00000571613 ERC2-IT1O76042 136 aa12.07□□□□□ -0.48
RPAIN-210ENST00000571613 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
RPAIN-210ENST00000571613 Q6ZQT0 140 aa12.06□□□□□ -0.48
RPAIN-210ENST00000571613 TRBV7-4A0A0J9YYF1 115 aa12.05□□□□□ -0.48
RPAIN-210ENST00000571613 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
RPAIN-210ENST00000571613 FRAS1Q86XX4 4008 aa12.05□□□□□ -0.48
RPAIN-210ENST00000571613 KRTAP13-1Q8IUC0 172 aa12.02□□□□□ -0.49
RPAIN-210ENST00000571613 Q6ZSA8 131 aa12.01□□□□□ -0.49
RPAIN-210ENST00000571613 HYDINQ4G0P3 5121 aa12□□□□□ -0.49
RPAIN-210ENST00000571613 XGP55808 180 aa12□□□□□ -0.49
RPAIN-210ENST00000571613 LINC00643Q86TS7 51 aa12□□□□□ -0.49
RPAIN-210ENST00000571613 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
RPAIN-210ENST00000571613 F8WEM9 126 aa11.98□□□□□ -0.49
RPAIN-210ENST00000571613 SPRR1BP22528 89 aa11.97□□□□□ -0.49
RPAIN-210ENST00000571613 SACSQ9NZJ4 4579 aa11.97□□□□□ -0.49
RPAIN-210ENST00000571613 CIRBP-AS1Q8TBR5 109 aa11.97□□□□□ -0.49
RPAIN-210ENST00000571613 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
RPAIN-210ENST00000571613 KRTAP10-1P60331 282 aa11.96□□□□□ -0.5
RPAIN-210ENST00000571613 LINC00846Q9NV44 126 aa11.96□□□□□ -0.5
RPAIN-210ENST00000571613 FAM30AQ9NZY2 134 aa11.96□□□□□ -0.5
RPAIN-210ENST00000571613 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
RPAIN-210ENST00000571613 C1orf137Q5JT78 98 aa11.95□□□□□ -0.5
RPAIN-210ENST00000571613 A0A1B0GW54 56 aa11.94□□□□□ -0.5
RPAIN-210ENST00000571613 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
RPAIN-210ENST00000571613 FAT2Q9NYQ8 4349 aa11.94□□□□□ -0.5
RPAIN-210ENST00000571613 ZNF706Q9Y5V0 76 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-210ENST00000571613 DNAH5Q8TE73 4624 aa11.93□□□□□ -0.5
RPAIN-210ENST00000571613 ZNF861PO60384 105 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms