RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 MIEN1Q9BRT3 115 aa10.64□□□□□ -0.71
SCARF1-204ENST00000570902 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
SCARF1-204ENST00000570902 C20orf202A1L168 122 aa10.63□□□□□ -0.71
SCARF1-204ENST00000570902 PRYO14603 147 aa10.63□□□□□ -0.71
SCARF1-204ENST00000570902 ADAMTSL4-AS1Q5T5F5 129 aa10.63□□□□□ -0.71
SCARF1-204ENST00000570902 NPC2P61916 151 aa10.62□□□□□ -0.71
SCARF1-204ENST00000570902 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
SCARF1-204ENST00000570902 HIST3H2BBQ8N257 126 aa10.61□□□□□ -0.71
SCARF1-204ENST00000570902 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
SCARF1-204ENST00000570902 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
SCARF1-204ENST00000570902 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
SCARF1-204ENST00000570902 TTTY13Q9BZ97 58 aa10.6□□□□□ -0.71
SCARF1-204ENST00000570902 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
SCARF1-204ENST00000570902 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
SCARF1-204ENST00000570902 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
SCARF1-204ENST00000570902 SPRR1AP35321 89 aa10.59□□□□□ -0.71
SCARF1-204ENST00000570902 SOSTDC1Q6X4U4 206 aa10.59□□□□□ -0.71
SCARF1-204ENST00000570902 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
SCARF1-204ENST00000570902 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 S100A2P29034 98 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 DDTP30046 118 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 S100A12P80511 92 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 Q8N377 158 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 LITAFQ99732 161 aa10.58□□□□□ -0.72
SCARF1-204ENST00000570902 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
SCARF1-204ENST00000570902 S100A6P06703 90 aa10.57□□□□□ -0.72
SCARF1-204ENST00000570902 ANKRD39Q53RE8 183 aa10.57□□□□□ -0.72
SCARF1-204ENST00000570902 SPANXB1Q9NS25 103 aaPredicted RBP10.57□□□□□ -0.72
SCARF1-204ENST00000570902 SLC25A20O43772 301 aa10.56□□□□□ -0.72
SCARF1-204ENST00000570902 TIMM17BO60830 172 aa10.56□□□□□ -0.72
SCARF1-204ENST00000570902 NDUFC2O95298 119 aa10.56□□□□□ -0.72
SCARF1-204ENST00000570902 XP32Q5T750 250 aa10.56□□□□□ -0.72
SCARF1-204ENST00000570902 KRTAP4-16G5E9R7 235 aaPredicted RBP10.55□□□□□ -0.72
SCARF1-204ENST00000570902 MOBPQ13875 183 aa10.55□□□□□ -0.72
SCARF1-204ENST00000570902 S100A7L2Q5SY68 101 aa10.55□□□□□ -0.72
SCARF1-204ENST00000570902 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
SCARF1-204ENST00000570902 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
SCARF1-204ENST00000570902 AKR1D1P51857 326 aa10.54□□□□□ -0.72
SCARF1-204ENST00000570902 LINC00308Q8TCZ7 52 aa10.54□□□□□ -0.72
SCARF1-204ENST00000570902 IGLV9-49A0A0B4J1Y8 123 aa10.53□□□□□ -0.72
SCARF1-204ENST00000570902 B5MCH6 92 aa10.51□□□□□ -0.73
SCARF1-204ENST00000570902 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
SCARF1-204ENST00000570902 SNRPEP62304 92 aaKnown RBP10.51□□□□□ -0.73
SCARF1-204ENST00000570902 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
SCARF1-204ENST00000570902 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
SCARF1-204ENST00000570902 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
SCARF1-204ENST00000570902 TRAV23DV6A0A075B6W5 121 aa10.49□□□□□ -0.73
SCARF1-204ENST00000570902 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
SCARF1-204ENST00000570902 CFC1BP0CG36 223 aa10.47□□□□□ -0.73
SCARF1-204ENST00000570902 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
SCARF1-204ENST00000570902 C5orf52A6NGY3 159 aa10.46□□□□□ -0.73
SCARF1-204ENST00000570902 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
SCARF1-204ENST00000570902 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
SCARF1-204ENST00000570902 Q6ZRX8 168 aa10.45□□□□□ -0.74
SCARF1-204ENST00000570902 Q9BRP9 147 aa10.45□□□□□ -0.74
SCARF1-204ENST00000570902 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
SCARF1-204ENST00000570902 MT1HP80294 61 aa10.44□□□□□ -0.74
SCARF1-204ENST00000570902 KRTAP19-2Q3LHN2 52 aa10.43□□□□□ -0.74
SCARF1-204ENST00000570902 HSBP1L1C9JCN9 74 aa10.42□□□□□ -0.74
SCARF1-204ENST00000570902 SCGB1D1O95968 90 aa10.42□□□□□ -0.74
SCARF1-204ENST00000570902 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
SCARF1-204ENST00000570902 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
SCARF1-204ENST00000570902 CBY1Q9Y3M2 126 aa10.42□□□□□ -0.74
SCARF1-204ENST00000570902 IFITM1P13164 125 aa10.4□□□□□ -0.74
SCARF1-204ENST00000570902 HINT1P49773 126 aaPredicted RBP10.4□□□□□ -0.74
SCARF1-204ENST00000570902 Q6ZVH6 145 aa10.4□□□□□ -0.74
SCARF1-204ENST00000570902 LINC00518Q8N0U6 118 aa10.4□□□□□ -0.74
SCARF1-204ENST00000570902 MUSTN1Q8IVN3 82 aa10.39□□□□□ -0.75
SCARF1-204ENST00000570902 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
SCARF1-204ENST00000570902 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
SCARF1-204ENST00000570902 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
SCARF1-204ENST00000570902 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
SCARF1-204ENST00000570902 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
SCARF1-204ENST00000570902 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
SCARF1-204ENST00000570902 A6NDN8 102 aa10.32□□□□□ -0.76
SCARF1-204ENST00000570902 COX7BP24311 80 aa10.32□□□□□ -0.76
SCARF1-204ENST00000570902 C6orf99Q4VX62 202 aa10.32□□□□□ -0.76
SCARF1-204ENST00000570902 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
SCARF1-204ENST00000570902 DHRS4-AS1Q9P1J3 65 aa10.3□□□□□ -0.76
SCARF1-204ENST00000570902 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
SCARF1-204ENST00000570902 ELOF1P60002 83 aaKnown RBP10.29□□□□□ -0.76
SCARF1-204ENST00000570902 COX8AP10176 69 aa10.28□□□□□ -0.76
SCARF1-204ENST00000570902 SLC25A34Q6PIV7 304 aa10.27□□□□□ -0.77
SCARF1-204ENST00000570902 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
SCARF1-204ENST00000570902 M0R2T5 61 aa10.26□□□□□ -0.77
SCARF1-204ENST00000570902 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
SCARF1-204ENST00000570902 A4D1N5 150 aa10.25□□□□□ -0.77
SCARF1-204ENST00000570902 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
SCARF1-204ENST00000570902 PAM16Q9Y3D7 125 aa10.25□□□□□ -0.77
SCARF1-204ENST00000570902 DLEU1O43261 78 aa10.24□□□□□ -0.77
SCARF1-204ENST00000570902 C14orf144Q96I85 54 aa10.24□□□□□ -0.77
SCARF1-204ENST00000570902 SPATA45Q537H7 98 aa10.23□□□□□ -0.77
SCARF1-204ENST00000570902 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
SCARF1-204ENST00000570902 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
SCARF1-204ENST00000570902 HIST1H4GQ99525 98 aa10.23□□□□□ -0.77
SCARF1-204ENST00000570902 SPRR1BP22528 89 aa10.22□□□□□ -0.77
SCARF1-204ENST00000570902 TAL2Q16559 108 aa10.22□□□□□ -0.77
SCARF1-204ENST00000570902 VAMP8Q9BV40 100 aa10.22□□□□□ -0.77
SCARF1-204ENST00000570902 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
SCARF1-204ENST00000570902 LAMTOR3Q9UHA4 124 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms