RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PRYO14603 147 aa8.18□□□□□ -1.1
USB1-214ENST00000568848 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
USB1-214ENST00000568848 KCNQ1DNQ9H478 68 aa8.18□□□□□ -1.1
USB1-214ENST00000568848 E9PLD3 99 aa8.17□□□□□ -1.1
USB1-214ENST00000568848 NPC2P61916 151 aa8.17□□□□□ -1.1
USB1-214ENST00000568848 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
USB1-214ENST00000568848 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
USB1-214ENST00000568848 SPINK1P00995 79 aa8.16□□□□□ -1.1
USB1-214ENST00000568848 SPRR1AP35321 89 aa8.16□□□□□ -1.1
USB1-214ENST00000568848 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
USB1-214ENST00000568848 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
USB1-214ENST00000568848 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
USB1-214ENST00000568848 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
USB1-214ENST00000568848 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
USB1-214ENST00000568848 LINC01545Q5VT33 79 aa8.15□□□□□ -1.1
USB1-214ENST00000568848 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.1
USB1-214ENST00000568848 C3orf79P0CE67 100 aa8.14□□□□□ -1.11
USB1-214ENST00000568848 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
USB1-214ENST00000568848 DDTP30046 118 aa8.14□□□□□ -1.11
USB1-214ENST00000568848 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
USB1-214ENST00000568848 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
USB1-214ENST00000568848 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
USB1-214ENST00000568848 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
USB1-214ENST00000568848 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
USB1-214ENST00000568848 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
USB1-214ENST00000568848 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
USB1-214ENST00000568848 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
USB1-214ENST00000568848 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
USB1-214ENST00000568848 B5MCH6 92 aa8.11□□□□□ -1.11
USB1-214ENST00000568848 KRTDAPP60985 99 aa8.11□□□□□ -1.11
USB1-214ENST00000568848 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
USB1-214ENST00000568848 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 NDUFC2O95298 119 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 S100A12P80511 92 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 LITAFQ99732 161 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 Q9BRP9 147 aa8.1□□□□□ -1.11
USB1-214ENST00000568848 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
USB1-214ENST00000568848 ZNF815PA8K554 130 aa8.08□□□□□ -1.12
USB1-214ENST00000568848 SLC25A20O43772 301 aa8.08□□□□□ -1.12
USB1-214ENST00000568848 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
USB1-214ENST00000568848 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
USB1-214ENST00000568848 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
USB1-214ENST00000568848 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 TIMM17BO60830 172 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 Q6ZRX8 168 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 ATOH7Q8N100 152 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 ST20-AS1Q8NBB2 130 aa8.05□□□□□ -1.12
USB1-214ENST00000568848 SSBP3-AS1Q7Z2R9 100 aa8.04□□□□□ -1.12
USB1-214ENST00000568848 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
USB1-214ENST00000568848 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
USB1-214ENST00000568848 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
USB1-214ENST00000568848 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
USB1-214ENST00000568848 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
USB1-214ENST00000568848 C20orf202A1L168 122 aa8.01□□□□□ -1.13
USB1-214ENST00000568848 M0R2T5 61 aa8.01□□□□□ -1.13
USB1-214ENST00000568848 JOSD1Q15040 202 aaPredicted RBP8□□□□□ -1.13
USB1-214ENST00000568848 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
USB1-214ENST00000568848 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
USB1-214ENST00000568848 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
USB1-214ENST00000568848 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
USB1-214ENST00000568848 HIST3H2BBQ8N257 126 aa7.97□□□□□ -1.13
USB1-214ENST00000568848 S100A1P23297 94 aa7.96□□□□□ -1.14
USB1-214ENST00000568848 LINC00518Q8N0U6 118 aa7.96□□□□□ -1.14
USB1-214ENST00000568848 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
USB1-214ENST00000568848 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
USB1-214ENST00000568848 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
USB1-214ENST00000568848 HIST1H2BLQ99880 126 aa7.95□□□□□ -1.14
USB1-214ENST00000568848 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
USB1-214ENST00000568848 H7C2G1 150 aa7.94□□□□□ -1.14
USB1-214ENST00000568848 S100A2P29034 98 aa7.94□□□□□ -1.14
USB1-214ENST00000568848 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
USB1-214ENST00000568848 COX7BP24311 80 aa7.93□□□□□ -1.14
USB1-214ENST00000568848 C6orf99Q4VX62 202 aa7.93□□□□□ -1.14
USB1-214ENST00000568848 IFITM1P13164 125 aa7.92□□□□□ -1.14
USB1-214ENST00000568848 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
USB1-214ENST00000568848 A0A0G2JQZ4 141 aa7.91□□□□□ -1.14
USB1-214ENST00000568848 AKR1D1P51857 326 aa7.91□□□□□ -1.14
USB1-214ENST00000568848 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
USB1-214ENST00000568848 DHRS4-AS1Q9P1J3 65 aa7.91□□□□□ -1.14
USB1-214ENST00000568848 A6NDN8 102 aa7.9□□□□□ -1.14
USB1-214ENST00000568848 Q6ZVH6 145 aa7.9□□□□□ -1.14
USB1-214ENST00000568848 USH2AO75445 5202 aa7.89□□□□□ -1.15
USB1-214ENST00000568848 C5orf52A6NGY3 159 aa7.89□□□□□ -1.15
USB1-214ENST00000568848 S100A6P06703 90 aa7.89□□□□□ -1.15
USB1-214ENST00000568848 SNRPEP62304 92 aaKnown RBP7.89□□□□□ -1.15
USB1-214ENST00000568848 COPS9Q8WXC6 57 aa7.89□□□□□ -1.15
USB1-214ENST00000568848 SPRR1BP22528 89 aa7.88□□□□□ -1.15
USB1-214ENST00000568848 DEFB105AQ8NG35 78 aa7.88□□□□□ -1.15
USB1-214ENST00000568848 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
USB1-214ENST00000568848 TAL2Q16559 108 aa7.86□□□□□ -1.15
USB1-214ENST00000568848 Q1RN00 199 aa7.86□□□□□ -1.15
USB1-214ENST00000568848 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
USB1-214ENST00000568848 TRBV7-6A0A0J9YX20 115 aa7.85□□□□□ -1.15
USB1-214ENST00000568848 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
USB1-214ENST00000568848 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
USB1-214ENST00000568848 SCGB1D1O95968 90 aa7.84□□□□□ -1.15
USB1-214ENST00000568848 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
USB1-214ENST00000568848 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms