RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 DNAL4O96015 105 aa4.15□□□□□ -1.75
PTPN9-205ENST00000568108 PFN2P35080 140 aa4.15□□□□□ -1.75
PTPN9-205ENST00000568108 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
PTPN9-205ENST00000568108 KRTAP10-4P60372 401 aaPredicted RBP4.14□□□□□ -1.75
PTPN9-205ENST00000568108 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
PTPN9-205ENST00000568108 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
PTPN9-205ENST00000568108 RMI2Q96E14 147 aa4.14□□□□□ -1.75
PTPN9-205ENST00000568108 PRR34Q9NV39 138 aa4.14□□□□□ -1.75
PTPN9-205ENST00000568108 IGLV10-54A0A075B6I4 117 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 FAM240AA0A1B0GVK7 77 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 A0A1B0GX51 115 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 F8WDY8 70 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 ACYP1P07311 99 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 KLK12Q9UKR0 248 aa4.13□□□□□ -1.75
PTPN9-205ENST00000568108 LRP1Q07954 4544 aaKnown RBP4.12□□□□□ -1.75
PTPN9-205ENST00000568108 GVQW2A0A096LPI5 108 aaPredicted RBP4.12□□□□□ -1.75
PTPN9-205ENST00000568108 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
PTPN9-205ENST00000568108 KIAA0087Q14695 138 aa4.12□□□□□ -1.75
PTPN9-205ENST00000568108 LINC00337Q8N6G1 96 aa4.12□□□□□ -1.75
PTPN9-205ENST00000568108 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
PTPN9-205ENST00000568108 IGKV2-28A0A075B6P5 120 aa4.11□□□□□ -1.75
PTPN9-205ENST00000568108 H3BQ85 93 aa4.11□□□□□ -1.75
PTPN9-205ENST00000568108 IGKV2D-28P01615 120 aa4.11□□□□□ -1.75
PTPN9-205ENST00000568108 RPL37AP61513 92 aaKnown RBP4.11□□□□□ -1.75
PTPN9-205ENST00000568108 S100A7L2Q5SY68 101 aa4.11□□□□□ -1.75
PTPN9-205ENST00000568108 SMIM11BQ8TCY0 68 aa4.11□□□□□ -1.75
PTPN9-205ENST00000568108 TEX49A0A1B0GTD5 131 aa4.1□□□□□ -1.75
PTPN9-205ENST00000568108 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
PTPN9-205ENST00000568108 C14orf177Q52M58 125 aa4.1□□□□□ -1.75
PTPN9-205ENST00000568108 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
PTPN9-205ENST00000568108 ENHOQ6UWT2 76 aa4.09□□□□□ -1.75
PTPN9-205ENST00000568108 ORMDL1Q9P0S3 153 aa4.09□□□□□ -1.75
PTPN9-205ENST00000568108 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.76
PTPN9-205ENST00000568108 CAMK2N2Q96S95 79 aa4.08□□□□□ -1.76
PTPN9-205ENST00000568108 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
PTPN9-205ENST00000568108 A0A1B0GV72 72 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 JMJD7-PLA2G4BH0Y9G9 81 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
PTPN9-205ENST00000568108 A0A087WYN8 130 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 NCR3O14931 201 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 Q6Q795 121 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 Q6ZRU5 148 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 LINC00167Q96N53 147 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
PTPN9-205ENST00000568108 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 TRBV7-6A0A0J9YX20 115 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 PANO1I0J062 215 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
PTPN9-205ENST00000568108 SDIM1Q6ZPB5 146 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 DIRC1Q969H9 104 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 C6orf48Q9UBA6 75 aa4.05□□□□□ -1.76
PTPN9-205ENST00000568108 TRAV23DV6A0A075B6W5 121 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 IGLV6-57P01721 117 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 MT-ATP8P03928 68 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 C6orf99Q4VX62 202 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 C10orf25Q5T742 122 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 IMUPQ9GZP8 106 aa4.04□□□□□ -1.76
PTPN9-205ENST00000568108 hADV29S1A0JD25 119 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 M0R378 163 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 RPL18AQ02543 176 aaKnown RBP4.03□□□□□ -1.76
PTPN9-205ENST00000568108 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 GAGE2AQ6NT46 116 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 C15orf56Q8N910 161 aa4.03□□□□□ -1.76
PTPN9-205ENST00000568108 TRBV7-7A0A0K0K1E9 115 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 TLX1NBP0CAT3 122 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 PDE6GP18545 87 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 COX7BP24311 80 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 LINC00575Q6W349 94 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 NKAPP1Q8N9T2 125 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 LINC00526Q96FQ7 95 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 OBSCN-AS1Q96MR7 158 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
PTPN9-205ENST00000568108 TRBV10-3A0A0K0K1G6 114 aa4.01□□□□□ -1.77
PTPN9-205ENST00000568108 ZNF73O43830 326 aaPredicted RBP4.01□□□□□ -1.77
PTPN9-205ENST00000568108 CNBPP62633 177 aaKnown RBP4.01□□□□□ -1.77
PTPN9-205ENST00000568108 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
PTPN9-205ENST00000568108 ATP5EP2Q5VTU8 51 aa4.01□□□□□ -1.77
PTPN9-205ENST00000568108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.01□□□□□ -1.77
PTPN9-205ENST00000568108 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
PTPN9-205ENST00000568108 SLPIP03973 132 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 CCKP06307 115 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 CHTF8P0CG12 524 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 VPREB1P12018 145 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 ANAPC13Q9BS18 74 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms