RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 IGKV2D-28P01615 120 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 XCL1P47992 114 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
CAPN3-217ENST00000567817 REG3AQ06141 175 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 SDIM1Q6ZPB5 146 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 SMIM11BQ8TCY0 68 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 CHCHD10Q8WYQ3 142 aaPredicted RBP3.56□□□□□ -1.84
CAPN3-217ENST00000567817 ORMDL1Q9P0S3 153 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 SORL1Q92673 2214 aa3.56□□□□□ -1.84
CAPN3-217ENST00000567817 PLECQ15149 4684 aaKnown RBP3.56□□□□□ -1.84
CAPN3-217ENST00000567817 GVQW2A0A096LPI5 108 aaPredicted RBP3.55□□□□□ -1.84
CAPN3-217ENST00000567817 A0A0J9YWU9 116 aa3.55□□□□□ -1.84
CAPN3-217ENST00000567817 F8WDY8 70 aa3.55□□□□□ -1.84
CAPN3-217ENST00000567817 TMEM256-PLSCR3K7ERE1 68 aa3.55□□□□□ -1.84
CAPN3-217ENST00000567817 KLK5Q9Y337 293 aaPredicted RBP3.55□□□□□ -1.84
CAPN3-217ENST00000567817 IGLV9-49A0A0B4J1Y8 123 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 LY6G6CO95867 125 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 ANGP03950 147 aaKnown RBP3.54□□□□□ -1.84
CAPN3-217ENST00000567817 PFN2P35080 140 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 DEFB135Q30KP9 77 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 LINC00269Q8N2A0 174 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 Q8NAQ8 132 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 OR13C6PQ8NH95 151 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
CAPN3-217ENST00000567817 NUPR2A6NF83 97 aa3.53□□□□□ -1.84
CAPN3-217ENST00000567817 VPREB1P12018 145 aa3.53□□□□□ -1.84
CAPN3-217ENST00000567817 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
CAPN3-217ENST00000567817 LINC00336Q6ZUF6 198 aa3.53□□□□□ -1.84
CAPN3-217ENST00000567817 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
CAPN3-217ENST00000567817 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CAPN3-217ENST00000567817 LECT2O14960 151 aa3.52□□□□□ -1.85
CAPN3-217ENST00000567817 PDE6GP18545 87 aa3.52□□□□□ -1.85
CAPN3-217ENST00000567817 SPAG11BQ08648 103 aa3.52□□□□□ -1.85
CAPN3-217ENST00000567817 TRBV7-6A0A0J9YX20 115 aa3.51□□□□□ -1.85
CAPN3-217ENST00000567817 ATOX1O00244 68 aa3.51□□□□□ -1.85
CAPN3-217ENST00000567817 Q6JHZ5 121 aa3.51□□□□□ -1.85
CAPN3-217ENST00000567817 Q8N814 137 aa3.51□□□□□ -1.85
CAPN3-217ENST00000567817 C11orf68Q9H3H3 251 aaKnown RBP3.51□□□□□ -1.85
CAPN3-217ENST00000567817 Q9HAA7 133 aa3.51□□□□□ -1.85
CAPN3-217ENST00000567817 DNAH10Q8IVF4 4471 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 A0A096LPF7 62 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 TRBV10-3A0A0K0K1G6 114 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 KRTAP16-1A8MUX0 517 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 CCKP06307 115 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 CLPSL2Q6UWE3 100 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 C2orf48Q96LS8 159 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
CAPN3-217ENST00000567817 DMBT1Q9UGM3 2413 aaPredicted RBP3.49□□□□□ -1.85
CAPN3-217ENST00000567817 FAM236AA0A1B0GUQ0 79 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 FAM236BA0A1B0GV22 79 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 UQCRQO14949 82 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 LINC00575Q6W349 94 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 KMT2AQ03164 3969 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 HERC1Q15751 4861 aa3.49□□□□□ -1.85
CAPN3-217ENST00000567817 IGLV10-54A0A075B6I4 117 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 hADV29S1A0JD25 119 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 HIST1H4AP62805 103 aaKnown RBP3.48□□□□□ -1.85
CAPN3-217ENST00000567817 C6orf99Q4VX62 202 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
CAPN3-217ENST00000567817 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 DIRC1Q969H9 104 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 UBL5Q9BZL1 73 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 C14orf132Q9NPU4 83 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 KLK12Q9UKR0 248 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 CELA1Q9UNI1 258 aa3.48□□□□□ -1.85
CAPN3-217ENST00000567817 TRAV23DV6A0A075B6W5 121 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 DEFB4AO15263 64 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 BCE1O60756 84 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 HTN3P15516 51 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 RBM3P98179 157 aaKnown RBP3.47□□□□□ -1.85
CAPN3-217ENST00000567817 LINC01556Q5JQF7 62 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 ENHOQ6UWT2 76 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 DSCR8Q96T75 97 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
CAPN3-217ENST00000567817 A0A1B0GW54 56 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 NDUFC2-KCTD14E9PQ53 114 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 M0R378 163 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 NCR3O14931 201 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 CDK2AP2O75956 126 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 RPL18AQ02543 176 aaKnown RBP3.46□□□□□ -1.86
CAPN3-217ENST00000567817 UNQ6190/PRO20217Q6UXQ8 127 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 RMI2Q96E14 147 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 LINC00846Q9NV44 126 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 C6orf48Q9UBA6 75 aa3.46□□□□□ -1.86
CAPN3-217ENST00000567817 IGLV7-46A0A075B6I9 117 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms