RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 NHLRC4P0CG21 123 aaPredicted RBP5.67□□□□□ -1.5
LINC01541-201ENST00000566582 NDUFV3P56181 108 aaKnown RBP5.67□□□□□ -1.5
LINC01541-201ENST00000566582 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
LINC01541-201ENST00000566582 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
LINC01541-201ENST00000566582 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
LINC01541-201ENST00000566582 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.66□□□□□ -1.5
LINC01541-201ENST00000566582 IMUPQ9GZP8 106 aa5.66□□□□□ -1.5
LINC01541-201ENST00000566582 C5orf47Q569G3 176 aa5.65□□□□□ -1.51
LINC01541-201ENST00000566582 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.51
LINC01541-201ENST00000566582 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 Q6ZQT0 140 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 DEFB105AQ8NG35 78 aa5.64□□□□□ -1.51
LINC01541-201ENST00000566582 TENM2Q9NT68 2774 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 LYSTQ99698 3801 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 UBL5Q9BZL1 73 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 LOC110117498A0A087WWA1 95 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 PRYO14603 147 aa5.63□□□□□ -1.51
LINC01541-201ENST00000566582 A0A096LNI7 61 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 PDE6GP18545 87 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 Q6JHZ5 121 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 NBDYA0A0U1RRE5 68 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
LINC01541-201ENST00000566582 Q6ZRX8 168 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
LINC01541-201ENST00000566582 C16orf90A8MZG2 172 aa5.61□□□□□ -1.51
LINC01541-201ENST00000566582 B5MCH6 92 aa5.6□□□□□ -1.51
LINC01541-201ENST00000566582 M0R2N4 97 aa5.6□□□□□ -1.51
LINC01541-201ENST00000566582 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
LINC01541-201ENST00000566582 J3QL48 77 aa5.6□□□□□ -1.51
LINC01541-201ENST00000566582 UBE2BP63146 152 aa5.6□□□□□ -1.51
LINC01541-201ENST00000566582 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
LINC01541-201ENST00000566582 TRBV7-4A0A0J9YYF1 115 aa5.59□□□□□ -1.51
LINC01541-201ENST00000566582 Q9BRP9 147 aa5.59□□□□□ -1.51
LINC01541-201ENST00000566582 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.52
LINC01541-201ENST00000566582 CSMD3Q7Z407 3707 aa5.58□□□□□ -1.52
LINC01541-201ENST00000566582 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
LINC01541-201ENST00000566582 SPRR1AP35321 89 aa5.58□□□□□ -1.52
LINC01541-201ENST00000566582 A0A087WVE0 104 aa5.58□□□□□ -1.52
LINC01541-201ENST00000566582 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
LINC01541-201ENST00000566582 HAMPP81172 84 aa5.58□□□□□ -1.52
LINC01541-201ENST00000566582 ATP5EP2Q5VTU8 51 aa5.57□□□□□ -1.52
LINC01541-201ENST00000566582 Q8N377 158 aa5.57□□□□□ -1.52
LINC01541-201ENST00000566582 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
LINC01541-201ENST00000566582 C3orf22Q8N5N4 141 aa5.57□□□□□ -1.52
LINC01541-201ENST00000566582 DPH3Q96FX2 82 aa5.57□□□□□ -1.52
LINC01541-201ENST00000566582 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 LRCOL1A6NCL2 159 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 Q6ZVQ6 151 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 FAM19A1Q7Z5A9 133 aa5.56□□□□□ -1.52
LINC01541-201ENST00000566582 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
LINC01541-201ENST00000566582 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
LINC01541-201ENST00000566582 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
LINC01541-201ENST00000566582 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
LINC01541-201ENST00000566582 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
LINC01541-201ENST00000566582 PRLHP81277 87 aa5.54□□□□□ -1.52
LINC01541-201ENST00000566582 DNAH7Q8WXX0 4024 aa5.54□□□□□ -1.52
LINC01541-201ENST00000566582 ATOX1O00244 68 aa5.54□□□□□ -1.52
LINC01541-201ENST00000566582 Q6ZRN7 208 aaPredicted RBP5.54□□□□□ -1.52
LINC01541-201ENST00000566582 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
LINC01541-201ENST00000566582 HIGD2AQ9BW72 106 aa5.54□□□□□ -1.52
LINC01541-201ENST00000566582 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
LINC01541-201ENST00000566582 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
LINC01541-201ENST00000566582 IGLV5-48A0A075B6I7 105 aa5.52□□□□□ -1.53
LINC01541-201ENST00000566582 C3orf84H3BNL1 204 aa5.52□□□□□ -1.53
LINC01541-201ENST00000566582 C1orf137Q5JT78 98 aa5.52□□□□□ -1.53
LINC01541-201ENST00000566582 F8WEM9 126 aa5.51□□□□□ -1.53
LINC01541-201ENST00000566582 FUSP35637 526 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC01541-201ENST00000566582 NREPQ16612 68 aa5.51□□□□□ -1.53
LINC01541-201ENST00000566582 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
LINC01541-201ENST00000566582 CXCL6P80162 114 aa5.5□□□□□ -1.53
LINC01541-201ENST00000566582 A0A087WTM6 91 aa5.49□□□□□ -1.53
LINC01541-201ENST00000566582 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
LINC01541-201ENST00000566582 UQCRQO14949 82 aa5.49□□□□□ -1.53
LINC01541-201ENST00000566582 LY6G6CO95867 125 aa5.49□□□□□ -1.53
LINC01541-201ENST00000566582 UBE2AP49459 152 aa5.49□□□□□ -1.53
LINC01541-201ENST00000566582 C9orf153Q5TBE3 101 aa5.49□□□□□ -1.53
LINC01541-201ENST00000566582 PANO1I0J062 215 aa5.48□□□□□ -1.53
LINC01541-201ENST00000566582 COX7CP15954 63 aa5.48□□□□□ -1.53
LINC01541-201ENST00000566582 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
LINC01541-201ENST00000566582 EPM2AB3EWF7 344 aa5.48□□□□□ -1.53
LINC01541-201ENST00000566582 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
LINC01541-201ENST00000566582 DYNC2H1Q8NCM8 4307 aaKnown RBP5.47□□□□□ -1.53
LINC01541-201ENST00000566582 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
LINC01541-201ENST00000566582 RTL8CO15255 209 aa5.47□□□□□ -1.53
LINC01541-201ENST00000566582 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
LINC01541-201ENST00000566582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-201ENST00000566582 Q6ZR54 194 aa5.46□□□□□ -1.53
LINC01541-201ENST00000566582 SMIM29Q86T20 159 aa5.46□□□□□ -1.53
LINC01541-201ENST00000566582 SERP2Q8N6R1 65 aa5.46□□□□□ -1.53
LINC01541-201ENST00000566582 LINC00476Q8WZB0 136 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms