RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
GTF3C1-205ENST00000564747 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
GTF3C1-205ENST00000564747 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
GTF3C1-205ENST00000564747 SCXQ7RTU7 201 aa10.18□□□□□ -0.78
GTF3C1-205ENST00000564747 SNURFQ9Y675 71 aa10.18□□□□□ -0.78
GTF3C1-205ENST00000564747 SERP1Q9Y6X1 66 aa10.17□□□□□ -0.78
GTF3C1-205ENST00000564747 RMI2Q96E14 147 aa10.16□□□□□ -0.78
GTF3C1-205ENST00000564747 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
GTF3C1-205ENST00000564747 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
GTF3C1-205ENST00000564747 DEFB131BA0A096LNP1 70 aa10.13□□□□□ -0.79
GTF3C1-205ENST00000564747 EPM2AB3EWF7 344 aa10.13□□□□□ -0.79
GTF3C1-205ENST00000564747 F8WEM9 126 aa10.13□□□□□ -0.79
GTF3C1-205ENST00000564747 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
GTF3C1-205ENST00000564747 TM2D3Q9BRN9 247 aa10.13□□□□□ -0.79
GTF3C1-205ENST00000564747 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
GTF3C1-205ENST00000564747 STAB1Q9NY15 2570 aa10.1□□□□□ -0.79
GTF3C1-205ENST00000564747 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 MAST4O15021 2626 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 NDUFC1O43677 76 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 KCNQ1DNQ9H478 68 aa10.09□□□□□ -0.79
GTF3C1-205ENST00000564747 NREPQ16612 68 aa10.08□□□□□ -0.8
GTF3C1-205ENST00000564747 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-205ENST00000564747 Q8N9L7 120 aa10.07□□□□□ -0.8
GTF3C1-205ENST00000564747 BPY2O14599 106 aa10.07□□□□□ -0.8
GTF3C1-205ENST00000564747 F8WDY8 70 aa10.06□□□□□ -0.8
GTF3C1-205ENST00000564747 Q8N377 158 aa10.06□□□□□ -0.8
GTF3C1-205ENST00000564747 RPL37AP8A6NKH3 93 aa10.05□□□□□ -0.8
GTF3C1-205ENST00000564747 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
GTF3C1-205ENST00000564747 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
GTF3C1-205ENST00000564747 C3orf84H3BNL1 204 aa10.04□□□□□ -0.8
GTF3C1-205ENST00000564747 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
GTF3C1-205ENST00000564747 CASC10Q5T4H9 136 aa10.04□□□□□ -0.8
GTF3C1-205ENST00000564747 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
GTF3C1-205ENST00000564747 SMIM26A0A096LP01 95 aa10.03□□□□□ -0.8
GTF3C1-205ENST00000564747 DNAH3Q8TD57 4116 aa10.02□□□□□ -0.81
GTF3C1-205ENST00000564747 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-205ENST00000564747 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-205ENST00000564747 Q9BRP9 147 aa10.01□□□□□ -0.81
GTF3C1-205ENST00000564747 IGKV4-1P06312 121 aa10□□□□□ -0.81
GTF3C1-205ENST00000564747 ERC2-IT1O76042 136 aa10□□□□□ -0.81
GTF3C1-205ENST00000564747 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
GTF3C1-205ENST00000564747 KRTAP24-1Q3LI83 254 aa10□□□□□ -0.81
GTF3C1-205ENST00000564747 LINC00588Q9Y4M8 146 aa10□□□□□ -0.81
GTF3C1-205ENST00000564747 DNAH1Q9P2D7 4330 aa9.99□□□□□ -0.81
GTF3C1-205ENST00000564747 Q6ZRX8 168 aa9.99□□□□□ -0.81
GTF3C1-205ENST00000564747 IGLV5-48A0A075B6I7 105 aa9.99□□□□□ -0.81
GTF3C1-205ENST00000564747 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
GTF3C1-205ENST00000564747 MRAPQ8TCY5 172 aa9.99□□□□□ -0.81
GTF3C1-205ENST00000564747 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
GTF3C1-205ENST00000564747 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-205ENST00000564747 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
GTF3C1-205ENST00000564747 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
GTF3C1-205ENST00000564747 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
GTF3C1-205ENST00000564747 DHRS4-AS1Q9P1J3 65 aa9.97□□□□□ -0.81
GTF3C1-205ENST00000564747 OCR1Q9BZK8 76 aa9.96□□□□□ -0.81
GTF3C1-205ENST00000564747 COL6A5A8TX70 2615 aa9.96□□□□□ -0.82
GTF3C1-205ENST00000564747 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.82
GTF3C1-205ENST00000564747 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
GTF3C1-205ENST00000564747 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
GTF3C1-205ENST00000564747 PRO0628Q9UI54 55 aa9.95□□□□□ -0.82
GTF3C1-205ENST00000564747 SPRR1AP35321 89 aa9.95□□□□□ -0.82
GTF3C1-205ENST00000564747 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
GTF3C1-205ENST00000564747 PRYO14603 147 aa9.94□□□□□ -0.82
GTF3C1-205ENST00000564747 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
GTF3C1-205ENST00000564747 NBEAL1Q6ZS30 2694 aa9.93□□□□□ -0.82
GTF3C1-205ENST00000564747 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
GTF3C1-205ENST00000564747 FUSP35637 526 aaKnown RBP eCLIP9.92□□□□□ -0.82
GTF3C1-205ENST00000564747 TNP2Q05952 138 aa9.92□□□□□ -0.82
GTF3C1-205ENST00000564747 C1orf137Q5JT78 98 aa9.92□□□□□ -0.82
GTF3C1-205ENST00000564747 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-205ENST00000564747 LYSTQ99698 3801 aa9.9□□□□□ -0.82
GTF3C1-205ENST00000564747 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.82
GTF3C1-205ENST00000564747 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-205ENST00000564747 UBE2BP63146 152 aa9.89□□□□□ -0.83
GTF3C1-205ENST00000564747 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
GTF3C1-205ENST00000564747 FAM229BQ4G0N7 80 aa9.87□□□□□ -0.83
GTF3C1-205ENST00000564747 Q8NBF4 154 aa9.87□□□□□ -0.83
GTF3C1-205ENST00000564747 SMIM29Q86T20 159 aa9.86□□□□□ -0.83
GTF3C1-205ENST00000564747 A0A1B0GW54 56 aa9.85□□□□□ -0.83
GTF3C1-205ENST00000564747 FAM30AQ9NZY2 134 aa9.85□□□□□ -0.83
GTF3C1-205ENST00000564747 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
GTF3C1-205ENST00000564747 REG3GQ6UW15 175 aa9.84□□□□□ -0.83
GTF3C1-205ENST00000564747 SPRR4Q96PI1 79 aa9.84□□□□□ -0.83
GTF3C1-205ENST00000564747 A0A0G2JQZ4 141 aa9.83□□□□□ -0.84
GTF3C1-205ENST00000564747 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
GTF3C1-205ENST00000564747 DSCR10P59022 87 aa9.81□□□□□ -0.84
GTF3C1-205ENST00000564747 BRK1Q8WUW1 75 aa9.81□□□□□ -0.84
GTF3C1-205ENST00000564747 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
GTF3C1-205ENST00000564747 DNAH9Q9NYC9 4486 aa9.8□□□□□ -0.84
GTF3C1-205ENST00000564747 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
GTF3C1-205ENST00000564747 K7EIL1 84 aa9.79□□□□□ -0.84
GTF3C1-205ENST00000564747 A0A096LNI7 61 aa9.79□□□□□ -0.84
GTF3C1-205ENST00000564747 K7EQZ3 153 aa9.79□□□□□ -0.84
GTF3C1-205ENST00000564747 KRTAP1-5Q9BYS1 174 aa9.79□□□□□ -0.84
GTF3C1-205ENST00000564747 CSMD3Q7Z407 3707 aa9.78□□□□□ -0.84
GTF3C1-205ENST00000564747 PRLHP81277 87 aa9.78□□□□□ -0.84
GTF3C1-205ENST00000564747 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms