RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 PRYO14603 147 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 BAALC-AS2P0C853 105 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 LINC00575Q6W349 94 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 LINC00167Q96N53 147 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
SMPD3-205ENST00000563455 A0A087WTM6 91 aa8.91□□□□□ -0.98
SMPD3-205ENST00000563455 COX7BP24311 80 aa8.91□□□□□ -0.98
SMPD3-205ENST00000563455 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
SMPD3-205ENST00000563455 hADV29S1A0JD25 119 aa8.9□□□□□ -0.98
SMPD3-205ENST00000563455 C21orf62-AS1Q17RA5 79 aa8.9□□□□□ -0.98
SMPD3-205ENST00000563455 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.98
SMPD3-205ENST00000563455 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.98
SMPD3-205ENST00000563455 IGLV1-50A0A075B6I6 118 aa8.89□□□□□ -0.99
SMPD3-205ENST00000563455 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
SMPD3-205ENST00000563455 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
SMPD3-205ENST00000563455 KIAA1109Q2LD37 5005 aa8.89□□□□□ -0.99
SMPD3-205ENST00000563455 A0A087WYN8 130 aa8.88□□□□□ -0.99
SMPD3-205ENST00000563455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
SMPD3-205ENST00000563455 DNAH17Q9UFH2 4485 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 JMJD7-PLA2G4BH0Y9G9 81 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 MTURNQ8N3F0 131 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
SMPD3-205ENST00000563455 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
SMPD3-205ENST00000563455 A0A096LNI7 61 aa8.86□□□□□ -0.99
SMPD3-205ENST00000563455 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
SMPD3-205ENST00000563455 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
SMPD3-205ENST00000563455 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
SMPD3-205ENST00000563455 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
SMPD3-205ENST00000563455 SPRR1AP35321 89 aa8.85□□□□□ -0.99
SMPD3-205ENST00000563455 ACYP1P07311 99 aa8.84□□□□□ -0.99
SMPD3-205ENST00000563455 TNP2Q05952 138 aa8.84□□□□□ -0.99
SMPD3-205ENST00000563455 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
SMPD3-205ENST00000563455 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
SMPD3-205ENST00000563455 FAM240AA0A1B0GVK7 77 aa8.82□□□□□ -1
SMPD3-205ENST00000563455 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
SMPD3-205ENST00000563455 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 EPM2AB3EWF7 344 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 PDE6GP18545 87 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 REG3GQ6UW15 175 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 Q6ZRX8 168 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 DNAH11Q96DT5 4516 aa8.81□□□□□ -1
SMPD3-205ENST00000563455 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
SMPD3-205ENST00000563455 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
SMPD3-205ENST00000563455 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 FAM168BA1KXE4 195 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
SMPD3-205ENST00000563455 H0Y9J4 135 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 DPH3Q96FX2 82 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 PKHD1P08F94 4074 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 PKD1P98161 4303 aa8.79□□□□□ -1
SMPD3-205ENST00000563455 B5MCH6 92 aa8.78□□□□□ -1
SMPD3-205ENST00000563455 Q6ZQY7 126 aa8.78□□□□□ -1
SMPD3-205ENST00000563455 A0A1W2PNN7 141 aa8.77□□□□□ -1.01
SMPD3-205ENST00000563455 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
SMPD3-205ENST00000563455 SPACA4Q8TDM5 124 aa8.77□□□□□ -1.01
SMPD3-205ENST00000563455 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
SMPD3-205ENST00000563455 UBE2BP63146 152 aa8.76□□□□□ -1.01
SMPD3-205ENST00000563455 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
SMPD3-205ENST00000563455 Q8N1X5 172 aa8.75□□□□□ -1.01
SMPD3-205ENST00000563455 RBM3P98179 157 aaKnown RBP8.73□□□□□ -1.01
SMPD3-205ENST00000563455 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
SMPD3-205ENST00000563455 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
SMPD3-205ENST00000563455 RYR1P21817 5038 aa8.72□□□□□ -1.01
SMPD3-205ENST00000563455 DSCR8Q96T75 97 aa8.71□□□□□ -1.02
SMPD3-205ENST00000563455 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
SMPD3-205ENST00000563455 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
SMPD3-205ENST00000563455 IGLV5-48A0A075B6I7 105 aa8.69□□□□□ -1.02
SMPD3-205ENST00000563455 A0A1B0GW54 56 aa8.69□□□□□ -1.02
SMPD3-205ENST00000563455 BCE1O60756 84 aa8.69□□□□□ -1.02
SMPD3-205ENST00000563455 NDUFV3P56181 108 aaKnown RBP8.69□□□□□ -1.02
SMPD3-205ENST00000563455 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
SMPD3-205ENST00000563455 KRTAP4-5Q9BYR2 181 aa8.69□□□□□ -1.02
SMPD3-205ENST00000563455 CCKP06307 115 aa8.68□□□□□ -1.02
SMPD3-205ENST00000563455 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
SMPD3-205ENST00000563455 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
SMPD3-205ENST00000563455 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
SMPD3-205ENST00000563455 Q9BRP9 147 aa8.67□□□□□ -1.02
SMPD3-205ENST00000563455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
SMPD3-205ENST00000563455 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
SMPD3-205ENST00000563455 UBE2AP49459 152 aa8.65□□□□□ -1.02
SMPD3-205ENST00000563455 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
SMPD3-205ENST00000563455 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.02
SMPD3-205ENST00000563455 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
SMPD3-205ENST00000563455 HSPG2P98160 4391 aa8.62□□□□□ -1.03
SMPD3-205ENST00000563455 TRBV7-4A0A0J9YYF1 115 aa8.62□□□□□ -1.03
SMPD3-205ENST00000563455 Q8N377 158 aa8.62□□□□□ -1.03
SMPD3-205ENST00000563455 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
SMPD3-205ENST00000563455 ZNF706Q9Y5V0 76 aaPredicted RBP8.62□□□□□ -1.03
SMPD3-205ENST00000563455 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
SMPD3-205ENST00000563455 F8WEM9 126 aa8.61□□□□□ -1.03
SMPD3-205ENST00000563455 PANO1I0J062 215 aa8.61□□□□□ -1.03
SMPD3-205ENST00000563455 SPRR1BP22528 89 aa8.61□□□□□ -1.03
SMPD3-205ENST00000563455 Q6ZQT0 140 aa8.61□□□□□ -1.03
SMPD3-205ENST00000563455 LINC00643Q86TS7 51 aa8.61□□□□□ -1.03
SMPD3-205ENST00000563455 LINC01547P58512 204 aaPredicted RBP8.6□□□□□ -1.03
SMPD3-205ENST00000563455 Q6ZSA8 131 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms