RNA–Protein interactions for RNA: ENST00000561591.1

CRNDE-211, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-211ENST00000561591 SNHG12Q9BXW3 62 aa1.37□□□□□ -2.19
CRNDE-211ENST00000561591 SND1-IT1Q9HBX3 110 aa1.37□□□□□ -2.19
CRNDE-211ENST00000561591 CDC42SE2Q9NRR3 84 aa1.37□□□□□ -2.19
CRNDE-211ENST00000561591 KLK5Q9Y337 293 aaPredicted RBP1.37□□□□□ -2.19
CRNDE-211ENST00000561591 SORL1Q92673 2214 aa1.37□□□□□ -2.19
CRNDE-211ENST00000561591 ASH1LQ9NR48 2969 aaKnown RBP1.37□□□□□ -2.19
CRNDE-211ENST00000561591 CELSR1Q9NYQ6 3014 aa1.37□□□□□ -2.19
CRNDE-211ENST00000561591 C2CD3Q4AC94 2353 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 MTORP42345 2549 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 CMYA5Q8N3K9 4069 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 NUPR2A6NF83 97 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 K7EP13 123 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 NCR3O14931 201 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 LY6G6CO95867 125 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 FXYD2P54710 66 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 LUZP6Q538Z0 58 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 C2orf82Q6UX34 121 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 C2orf91Q6ZV80 131 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 C15orf53Q8NAA6 179 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 MRPS16Q9Y3D3 137 aaKnown RBP1.36□□□□□ -2.19
CRNDE-211ENST00000561591 LINC00588Q9Y4M8 146 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 ZANQ9Y493 2812 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 SETXQ7Z333 2677 aaKnown RBP1.36□□□□□ -2.19
CRNDE-211ENST00000561591 ITPR2Q14571 2701 aa1.36□□□□□ -2.19
CRNDE-211ENST00000561591 OTOGQ6ZRI0 2925 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.35□□□□□ -2.19
CRNDE-211ENST00000561591 A0A1B0GV72 72 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 A0A1W2PNN7 141 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 M0QXV9 152 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 NDUFA1O15239 70 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 FABP2P12104 132 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 MIAQ16674 131 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 C9orf116Q5BN46 136 aaPredicted RBP1.35□□□□□ -2.19
CRNDE-211ENST00000561591 S100A7L2Q5SY68 101 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 ENHOQ6UWT2 76 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 MRPL52Q86TS9 123 aaKnown RBP1.35□□□□□ -2.19
CRNDE-211ENST00000561591 C10orf126Q8N4M7 172 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 COPS9Q8WXC6 57 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 DPH3Q96FX2 82 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 RBM12B-AS1Q9P1G2 102 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 HIGD1BQ9P298 99 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 PRO0628Q9UI54 55 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 ERG28Q9UKR5 140 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 ZNF706Q9Y5V0 76 aaPredicted RBP1.35□□□□□ -2.19
CRNDE-211ENST00000561591 SPCS1Q9Y6A9 102 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 MAP1AP78559 2803 aaPredicted RBP1.35□□□□□ -2.19
CRNDE-211ENST00000561591 HIVEP1P15822 2718 aa1.35□□□□□ -2.19
CRNDE-211ENST00000561591 NSD1Q96L73 2696 aaPredicted RBP1.34□□□□□ -2.19
CRNDE-211ENST00000561591 TAX1BP3O14907 124 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 DLEU1O43261 78 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 FUSP35637 526 aaKnown RBP eCLIP1.34□□□□□ -2.19
CRNDE-211ENST00000561591 LINC01556Q5JQF7 62 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 LYRM7Q5U5X0 104 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 Q6ZRU5 148 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 GTF2H5Q6ZYL4 71 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 FAM19A5Q7Z5A7 132 aaPredicted RBP1.34□□□□□ -2.19
CRNDE-211ENST00000561591 Q8IZM0 81 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 LINC00308Q8TCZ7 52 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 ZCCHC13Q8WW36 166 aaKnown RBP1.34□□□□□ -2.19
CRNDE-211ENST00000561591 CARD19Q96LW7 228 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 SPANXDQ9BXN6 97 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 XAGE1AQ9HD64 81 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 SPANXB1Q9NS25 103 aaPredicted RBP1.34□□□□□ -2.19
CRNDE-211ENST00000561591 SPANXCQ9NY87 97 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 APLNQ9ULZ1 77 aa1.34□□□□□ -2.19
CRNDE-211ENST00000561591 TEP1Q99973 2627 aaKnown RBP1.34□□□□□ -2.2
CRNDE-211ENST00000561591 SETD2Q9BYW2 2564 aaPredicted RBP1.33□□□□□ -2.2
CRNDE-211ENST00000561591 A0A1W2PPM0 123 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 IBA57-AS1B1ANH7 110 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 H3BNG1 76 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 K7EP34 96 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 DNAL4O96015 105 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 COX6CP09669 75 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 IFITM1P13164 125 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 UBE2BP63146 152 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 SOSTDC1Q6X4U4 206 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 MUC7Q8TAX7 377 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 CLEC2BQ92478 149 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 C6orf48Q9UBA6 75 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 PRO1854Q9UHT4 67 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 JMJD1CQ15652 2540 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 MXRA5Q9NR99 2828 aa1.33□□□□□ -2.2
CRNDE-211ENST00000561591 ATRQ13535 2644 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 HUWE1Q7Z6Z7 4374 aaKnown RBP1.32□□□□□ -2.2
CRNDE-211ENST00000561591 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 A0A0B4J2C4 111 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 LOC107984640A0A0U1RRK4 108 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 C9JAW5 83 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 H3BMG7 143 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 TIMM17BO60830 172 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 SNCGO76070 127 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 TCL1BO95988 128 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 CD164Q04900 197 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 ATXN8Q156A1 80 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 ANAPC13Q9BS18 74 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 TRRAPQ9Y4A5 3859 aa1.32□□□□□ -2.2
CRNDE-211ENST00000561591 ANK2Q01484 3957 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms