RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SFT2D1Q8WV19 159 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 C20orf78Q9BR46 151 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 SPANXA1Q9NS26 97 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 NEBP20929 6669 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 IGKV2D-26A0A0A0MRZ7 120 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 MUC21A0A140T8X8 626 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 LINC00862A6NCI5 91 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 FCER1GP30273 86 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 GNG4P50150 75 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 ZNF345Q14585 488 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 RPL7L1Q6DKI1 246 aaKnown RBP1.73□□□□□ -2.13
HERC1-215ENST00000561436 KCNRGQ8N5I3 272 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 BORCS7Q96B45 105 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 TMEM191AQ9H0A3 160 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 NDUFA12Q9UI09 145 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 UBE2D4Q9Y2X8 147 aa1.73□□□□□ -2.13
HERC1-215ENST00000561436 TGIF2-C20orf24A0A0A6YYL0 155 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 TRAV13-1A0A0B4J241 112 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 ZNF727A8MUV8 499 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 SPINK1P00995 79 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 SEC11AP67812 179 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 HBBP68871 147 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 FAM19A5Q7Z5A7 132 aaPredicted RBP1.72□□□□□ -2.13
HERC1-215ENST00000561436 C5orf38Q86SI9 138 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 FAM19A2Q8N3H0 131 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 C20orf166-AS1Q96NR2 134 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 C22orf24Q9Y442 160 aa1.72□□□□□ -2.13
HERC1-215ENST00000561436 A0A1B0GUT8 65 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 PPBPP02775 128 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 S100A8P05109 93 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 LINC00614P0C842 121 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 G0S2P27469 103 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 Q8IZM0 81 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 FAM213BQ8TBF2 198 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 RPL39LQ96EH5 51 aaKnown RBP1.71□□□□□ -2.14
HERC1-215ENST00000561436 TMEM242Q9NWH2 141 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 C6orf48Q9UBA6 75 aa1.71□□□□□ -2.14
HERC1-215ENST00000561436 FXYD6-FXYD2A0A087WZ82 144 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 LINC01549A6NIU2 74 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 HMSDA8MTL9 139 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 F8VRH5 84 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 K7EMI3 77 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 IFI27P40305 119 aaPredicted RBP1.7□□□□□ -2.14
HERC1-215ENST00000561436 CKS1BP61024 79 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 DAND5Q8N907 189 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 C2orf88Q9BSF0 95 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 MED9Q9NWA0 146 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 LAMTOR2Q9Y2Q5 125 aa1.7□□□□□ -2.14
HERC1-215ENST00000561436 TRBV20OR9-2A0A075B6H5 130 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 F8W036 122 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 MRPL51Q4U2R6 128 aaKnown RBP1.69□□□□□ -2.14
HERC1-215ENST00000561436 Q5BKY6 102 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 SFTA2Q6UW10 78 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 TMEM141Q96I45 108 aa1.69□□□□□ -2.14
HERC1-215ENST00000561436 RNASE7Q9H1E1 156 aaKnown RBP1.69□□□□□ -2.14
HERC1-215ENST00000561436 HIGD1CA8MV81 97 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 ARPC5O15511 151 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 CEBPGP53567 150 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 HERVK_113P63121 156 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 COX17Q14061 63 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 Q6ZUT4 128 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 ZCCHC13Q8WW36 166 aaKnown RBP1.68□□□□□ -2.14
HERC1-215ENST00000561436 PLEKHB2Q96CS7 222 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 OSTCQ9NRP0 149 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 NAT8BQ9UHF3 227 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 LPAP08519 4548 aa1.68□□□□□ -2.14
HERC1-215ENST00000561436 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
HERC1-215ENST00000561436 CKS2P33552 79 aa1.67□□□□□ -2.14
HERC1-215ENST00000561436 MT1HP80294 61 aa1.67□□□□□ -2.14
HERC1-215ENST00000561436 ATP5L2Q7Z4Y8 100 aa1.67□□□□□ -2.14
HERC1-215ENST00000561436 AMELXQ99217 191 aa1.67□□□□□ -2.14
HERC1-215ENST00000561436 SMIM2Q9BVW6 85 aa1.67□□□□□ -2.14
HERC1-215ENST00000561436 C4orf26Q17RF5 130 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 C2orf82Q6UX34 121 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 SLC51BQ86UW2 128 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 SPRR4Q96PI1 79 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 RETNLBQ9BQ08 111 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 TMEM126AQ9H061 195 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 XAGE1AQ9HD64 81 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 LINC00846Q9NV44 126 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 CYSLTR1Q9Y271 337 aa1.66□□□□□ -2.14
HERC1-215ENST00000561436 TINCRA0A1B0GVN0 87 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 SMIM27A0A1W2PRY6 76 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 IGIPA6NJ69 53 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 LINC00587B1AMM8 73 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 M0R378 163 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 TSPEAR-AS2P59090 65 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 RPL39P62891 51 aaKnown RBP1.65□□□□□ -2.15
HERC1-215ENST00000561436 S100A12P80511 92 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 KRTAP19-2Q3LHN2 52 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 ALKAL2Q6UX46 152 aa1.65□□□□□ -2.15
HERC1-215ENST00000561436 NXT2Q9NPJ8 142 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms