RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ALMS1Q8TCU4 4167 aa10.88□□□□□ -0.67
HDDC3-206ENST00000561036 DNAH6Q9C0G6 4158 aa10.88□□□□□ -0.67
HDDC3-206ENST00000561036 J3QR89 54 aa10.88□□□□□ -0.67
HDDC3-206ENST00000561036 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
HDDC3-206ENST00000561036 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
HDDC3-206ENST00000561036 H3BQ85 93 aa10.87□□□□□ -0.67
HDDC3-206ENST00000561036 RTL8CO15255 209 aa10.87□□□□□ -0.67
HDDC3-206ENST00000561036 SPRR1AP35321 89 aa10.87□□□□□ -0.67
HDDC3-206ENST00000561036 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
HDDC3-206ENST00000561036 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
HDDC3-206ENST00000561036 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
HDDC3-206ENST00000561036 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
HDDC3-206ENST00000561036 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
HDDC3-206ENST00000561036 IGLV5-52A0A0A0MRZ9 124 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 EPM2AB3EWF7 344 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
HDDC3-206ENST00000561036 TMEM256-PLSCR3K7ERE1 68 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 GHRHP01286 108 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 TNP2Q05952 138 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.83□□□□□ -0.68
HDDC3-206ENST00000561036 SPACA4Q8TDM5 124 aa10.83□□□□□ -0.68
HDDC3-206ENST00000561036 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
HDDC3-206ENST00000561036 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
HDDC3-206ENST00000561036 DHRS4-AS1Q9P1J3 65 aa10.81□□□□□ -0.68
HDDC3-206ENST00000561036 TEX49A0A1B0GTD5 131 aa10.8□□□□□ -0.68
HDDC3-206ENST00000561036 B5MCH6 92 aa10.8□□□□□ -0.68
HDDC3-206ENST00000561036 Q6ZRX8 168 aa10.8□□□□□ -0.68
HDDC3-206ENST00000561036 LCE6AA0A183 80 aa10.78□□□□□ -0.68
HDDC3-206ENST00000561036 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
HDDC3-206ENST00000561036 KMT2AQ03164 3969 aa10.77□□□□□ -0.68
HDDC3-206ENST00000561036 PANO1I0J062 215 aa10.77□□□□□ -0.69
HDDC3-206ENST00000561036 Q6ZQY7 126 aa10.77□□□□□ -0.69
HDDC3-206ENST00000561036 OBSCN-AS1Q96MR7 158 aa10.77□□□□□ -0.69
HDDC3-206ENST00000561036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
HDDC3-206ENST00000561036 PHF5AQ7RTV0 110 aaKnown RBP10.76□□□□□ -0.69
HDDC3-206ENST00000561036 UBE2BP63146 152 aa10.75□□□□□ -0.69
HDDC3-206ENST00000561036 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
HDDC3-206ENST00000561036 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
HDDC3-206ENST00000561036 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDDC3-206ENST00000561036 Q9BRP9 147 aa10.72□□□□□ -0.69
HDDC3-206ENST00000561036 DNAH2Q9P225 4427 aa10.71□□□□□ -0.69
HDDC3-206ENST00000561036 H0Y9J4 135 aa10.71□□□□□ -0.69
HDDC3-206ENST00000561036 DNAH17Q9UFH2 4485 aa10.69□□□□□ -0.7
HDDC3-206ENST00000561036 FAM240AA0A1B0GVK7 77 aa10.69□□□□□ -0.7
HDDC3-206ENST00000561036 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
HDDC3-206ENST00000561036 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
HDDC3-206ENST00000561036 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
HDDC3-206ENST00000561036 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
HDDC3-206ENST00000561036 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
HDDC3-206ENST00000561036 BCE1O60756 84 aa10.66□□□□□ -0.7
HDDC3-206ENST00000561036 ACYP1P07311 99 aa10.66□□□□□ -0.7
HDDC3-206ENST00000561036 LAMTOR3Q9UHA4 124 aa10.66□□□□□ -0.7
HDDC3-206ENST00000561036 IGLV5-48A0A075B6I7 105 aa10.65□□□□□ -0.7
HDDC3-206ENST00000561036 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.7
HDDC3-206ENST00000561036 NDUFV3P56181 108 aaKnown RBP10.64□□□□□ -0.71
HDDC3-206ENST00000561036 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
HDDC3-206ENST00000561036 C14orf132Q9NPU4 83 aa10.64□□□□□ -0.71
HDDC3-206ENST00000561036 LINC01547P58512 204 aaPredicted RBP10.63□□□□□ -0.71
HDDC3-206ENST00000561036 ERC2-IT1O76042 136 aa10.62□□□□□ -0.71
HDDC3-206ENST00000561036 PDE6GP18545 87 aa10.62□□□□□ -0.71
HDDC3-206ENST00000561036 PRLHP81277 87 aa10.62□□□□□ -0.71
HDDC3-206ENST00000561036 C21orf62-AS1Q17RA5 79 aa10.62□□□□□ -0.71
HDDC3-206ENST00000561036 Q8N377 158 aa10.62□□□□□ -0.71
HDDC3-206ENST00000561036 LOC110117498A0A087WWA1 95 aa10.61□□□□□ -0.71
HDDC3-206ENST00000561036 UBE2AP49459 152 aa10.61□□□□□ -0.71
HDDC3-206ENST00000561036 Q6ZSA8 131 aa10.61□□□□□ -0.71
HDDC3-206ENST00000561036 CCKP06307 115 aa10.6□□□□□ -0.71
HDDC3-206ENST00000561036 DEFB105AQ8NG35 78 aa10.6□□□□□ -0.71
HDDC3-206ENST00000561036 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
HDDC3-206ENST00000561036 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
HDDC3-206ENST00000561036 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
HDDC3-206ENST00000561036 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
HDDC3-206ENST00000561036 HECTD4Q9Y4D8 3996 aa10.59□□□□□ -0.71
HDDC3-206ENST00000561036 FRAS1Q86XX4 4008 aa10.58□□□□□ -0.72
HDDC3-206ENST00000561036 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
HDDC3-206ENST00000561036 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
HDDC3-206ENST00000561036 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
HDDC3-206ENST00000561036 A0A1B0GV72 72 aa10.56□□□□□ -0.72
HDDC3-206ENST00000561036 Q6ZQT0 140 aa10.56□□□□□ -0.72
HDDC3-206ENST00000561036 FAM30AQ9NZY2 134 aa10.56□□□□□ -0.72
HDDC3-206ENST00000561036 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
HDDC3-206ENST00000561036 TRBV7-4A0A0J9YYF1 115 aa10.55□□□□□ -0.72
HDDC3-206ENST00000561036 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
HDDC3-206ENST00000561036 SPRR1BP22528 89 aa10.53□□□□□ -0.72
HDDC3-206ENST00000561036 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
HDDC3-206ENST00000561036 SIGMAR1Q99720 223 aa10.52□□□□□ -0.73
HDDC3-206ENST00000561036 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
HDDC3-206ENST00000561036 DNAH11Q96DT5 4516 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 A0A1B0GVY2 172 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 ZNF861PO60384 105 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 SACSQ9NZJ4 4579 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
HDDC3-206ENST00000561036 F8WEM9 126 aa10.48□□□□□ -0.73
HDDC3-206ENST00000561036 XGP55808 180 aa10.47□□□□□ -0.73
HDDC3-206ENST00000561036 C3orf22Q8N5N4 141 aa10.47□□□□□ -0.73
HDDC3-206ENST00000561036 ZNF706Q9Y5V0 76 aaPredicted RBP10.47□□□□□ -0.73
HDDC3-206ENST00000561036 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.73
HDDC3-206ENST00000561036 IGLV7-43P04211 117 aa10.46□□□□□ -0.73
HDDC3-206ENST00000561036 LINC00643Q86TS7 51 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms