RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 SND1-IT1Q9HBX3 110 aa10.98□□□□□ -0.65
RABGGTA-214ENST00000560163 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
RABGGTA-214ENST00000560163 PFN2P35080 140 aa10.97□□□□□ -0.65
RABGGTA-214ENST00000560163 J3QQQ9 107 aa10.96□□□□□ -0.65
RABGGTA-214ENST00000560163 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
RABGGTA-214ENST00000560163 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
RABGGTA-214ENST00000560163 LORP23490 312 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-214ENST00000560163 NMUP48645 174 aa10.94□□□□□ -0.66
RABGGTA-214ENST00000560163 TSPEAR-AS2P59090 65 aa10.94□□□□□ -0.66
RABGGTA-214ENST00000560163 COX8AP10176 69 aa10.93□□□□□ -0.66
RABGGTA-214ENST00000560163 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
RABGGTA-214ENST00000560163 DLEU1O43261 78 aa10.92□□□□□ -0.66
RABGGTA-214ENST00000560163 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
RABGGTA-214ENST00000560163 Q8N377 158 aa10.92□□□□□ -0.66
RABGGTA-214ENST00000560163 ZNF706Q9Y5V0 76 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-214ENST00000560163 BOD1L2Q8IYS8 172 aa10.91□□□□□ -0.66
RABGGTA-214ENST00000560163 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
RABGGTA-214ENST00000560163 RPS29P62273 56 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-214ENST00000560163 COX17Q14061 63 aa10.9□□□□□ -0.66
RABGGTA-214ENST00000560163 PCP2Q8IVA1 136 aa10.9□□□□□ -0.66
RABGGTA-214ENST00000560163 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
RABGGTA-214ENST00000560163 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
RABGGTA-214ENST00000560163 KRTAP10-6P60371 365 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-214ENST00000560163 MYMXA0A1B0GTQ4 84 aa10.88□□□□□ -0.67
RABGGTA-214ENST00000560163 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
RABGGTA-214ENST00000560163 SLC25A34Q6PIV7 304 aa10.88□□□□□ -0.67
RABGGTA-214ENST00000560163 HERV-K104P63124 156 aa10.87□□□□□ -0.67
RABGGTA-214ENST00000560163 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
RABGGTA-214ENST00000560163 C14orf144Q96I85 54 aa10.87□□□□□ -0.67
RABGGTA-214ENST00000560163 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
RABGGTA-214ENST00000560163 UQCR10Q9UDW1 63 aa10.86□□□□□ -0.67
RABGGTA-214ENST00000560163 TSTD3H0UI37 97 aa10.85□□□□□ -0.67
RABGGTA-214ENST00000560163 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
RABGGTA-214ENST00000560163 MIEN1Q9BRT3 115 aa10.84□□□□□ -0.67
RABGGTA-214ENST00000560163 A0A0J9YXY3 114 aa10.83□□□□□ -0.68
RABGGTA-214ENST00000560163 SLC25A20O43772 301 aa10.83□□□□□ -0.68
RABGGTA-214ENST00000560163 PRO1933Q9H354 126 aa10.83□□□□□ -0.68
RABGGTA-214ENST00000560163 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
RABGGTA-214ENST00000560163 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-214ENST00000560163 TIMM17BO60830 172 aa10.82□□□□□ -0.68
RABGGTA-214ENST00000560163 SPRR1AP35321 89 aa10.82□□□□□ -0.68
RABGGTA-214ENST00000560163 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
RABGGTA-214ENST00000560163 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
RABGGTA-214ENST00000560163 SSBP3-AS1Q7Z2R9 100 aa10.81□□□□□ -0.68
RABGGTA-214ENST00000560163 PRYO14603 147 aa10.79□□□□□ -0.68
RABGGTA-214ENST00000560163 MOBPQ13875 183 aa10.79□□□□□ -0.68
RABGGTA-214ENST00000560163 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
RABGGTA-214ENST00000560163 LITAFQ99732 161 aa10.79□□□□□ -0.68
RABGGTA-214ENST00000560163 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
RABGGTA-214ENST00000560163 PCOTHQ58A44 107 aa10.77□□□□□ -0.69
RABGGTA-214ENST00000560163 SPANXB1Q9NS25 103 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-214ENST00000560163 IGLV8-61A0A075B6I0 122 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 IGLV9-49A0A0B4J1Y8 123 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 KRTAP9-7A8MTY7 169 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 MEIG1Q5JSS6 88 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 GAGE2AQ6NT46 116 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 Q6ZVH6 145 aa10.76□□□□□ -0.69
RABGGTA-214ENST00000560163 SPANXDQ9BXN6 97 aa10.75□□□□□ -0.69
RABGGTA-214ENST00000560163 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
RABGGTA-214ENST00000560163 ERC2-IT1O76042 136 aa10.73□□□□□ -0.69
RABGGTA-214ENST00000560163 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
RABGGTA-214ENST00000560163 DDTP30046 118 aa10.73□□□□□ -0.69
RABGGTA-214ENST00000560163 TAL2Q16559 108 aa10.73□□□□□ -0.69
RABGGTA-214ENST00000560163 FLGP20930 4061 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-214ENST00000560163 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-214ENST00000560163 LINC00158P58513 81 aa10.72□□□□□ -0.69
RABGGTA-214ENST00000560163 ADAMTSL4-AS1Q5T5F5 129 aa10.72□□□□□ -0.69
RABGGTA-214ENST00000560163 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
RABGGTA-214ENST00000560163 IFITM1P13164 125 aa10.7□□□□□ -0.7
RABGGTA-214ENST00000560163 HSD52Q0P140 79 aa10.7□□□□□ -0.7
RABGGTA-214ENST00000560163 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
RABGGTA-214ENST00000560163 B5MCH6 92 aa10.69□□□□□ -0.7
RABGGTA-214ENST00000560163 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
RABGGTA-214ENST00000560163 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
RABGGTA-214ENST00000560163 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
RABGGTA-214ENST00000560163 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
RABGGTA-214ENST00000560163 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
RABGGTA-214ENST00000560163 NCR3O14931 201 aa10.67□□□□□ -0.7
RABGGTA-214ENST00000560163 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
RABGGTA-214ENST00000560163 M0R2T5 61 aa10.66□□□□□ -0.7
RABGGTA-214ENST00000560163 LINC00308Q8TCZ7 52 aa10.66□□□□□ -0.7
RABGGTA-214ENST00000560163 Q9BRP9 147 aa10.66□□□□□ -0.7
RABGGTA-214ENST00000560163 CEND1Q8N111 149 aa10.65□□□□□ -0.7
RABGGTA-214ENST00000560163 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
RABGGTA-214ENST00000560163 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
RABGGTA-214ENST00000560163 M0R143 59 aa10.62□□□□□ -0.71
RABGGTA-214ENST00000560163 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-214ENST00000560163 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
RABGGTA-214ENST00000560163 PCP4L1A6NKN8 68 aa10.6□□□□□ -0.71
RABGGTA-214ENST00000560163 NDUFC2O95298 119 aa10.6□□□□□ -0.71
RABGGTA-214ENST00000560163 BVES-AS1Q5T3Y7 98 aa10.6□□□□□ -0.71
RABGGTA-214ENST00000560163 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
RABGGTA-214ENST00000560163 A6NJY4 79 aa10.59□□□□□ -0.71
RABGGTA-214ENST00000560163 FXYD2P54710 66 aa10.59□□□□□ -0.71
RABGGTA-214ENST00000560163 NPC2P61916 151 aa10.59□□□□□ -0.71
RABGGTA-214ENST00000560163 Q6ZRX8 168 aa10.59□□□□□ -0.71
RABGGTA-214ENST00000560163 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
RABGGTA-214ENST00000560163 A4D1N5 150 aa10.57□□□□□ -0.72
RABGGTA-214ENST00000560163 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-214ENST00000560163 SSPOA2VEC9 5147 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms