RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 XP32Q5T750 250 aa9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.97
CDC42BPB-205ENST00000559245 NCR3O14931 201 aa9.01□□□□□ -0.97
CDC42BPB-205ENST00000559245 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
CDC42BPB-205ENST00000559245 MOBPQ13875 183 aa9.01□□□□□ -0.97
CDC42BPB-205ENST00000559245 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
CDC42BPB-205ENST00000559245 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
CDC42BPB-205ENST00000559245 E9PLD3 99 aa9□□□□□ -0.97
CDC42BPB-205ENST00000559245 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
CDC42BPB-205ENST00000559245 SLC25A20O43772 301 aa8.99□□□□□ -0.97
CDC42BPB-205ENST00000559245 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
CDC42BPB-205ENST00000559245 TRBV10-3A0A0K0K1G6 114 aa8.98□□□□□ -0.97
CDC42BPB-205ENST00000559245 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
CDC42BPB-205ENST00000559245 LEPROTO15243 131 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 HERVK_113P61574 105 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 ANKRD39Q53RE8 183 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
CDC42BPB-205ENST00000559245 B5MCH6 92 aa8.95□□□□□ -0.98
CDC42BPB-205ENST00000559245 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
CDC42BPB-205ENST00000559245 TSPEAR-AS2P59090 65 aa8.94□□□□□ -0.98
CDC42BPB-205ENST00000559245 MT1HP80294 61 aa8.94□□□□□ -0.98
CDC42BPB-205ENST00000559245 S100A12P80511 92 aa8.94□□□□□ -0.98
CDC42BPB-205ENST00000559245 VAMP8Q9BV40 100 aa8.94□□□□□ -0.98
CDC42BPB-205ENST00000559245 HSBP1L1C9JCN9 74 aa8.93□□□□□ -0.98
CDC42BPB-205ENST00000559245 LINC00518Q8N0U6 118 aa8.93□□□□□ -0.98
CDC42BPB-205ENST00000559245 J3QQQ9 107 aa8.92□□□□□ -0.98
CDC42BPB-205ENST00000559245 NMUP48645 174 aa8.92□□□□□ -0.98
CDC42BPB-205ENST00000559245 Q9BRP9 147 aa8.92□□□□□ -0.98
CDC42BPB-205ENST00000559245 DLEU1O43261 78 aa8.91□□□□□ -0.98
CDC42BPB-205ENST00000559245 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
CDC42BPB-205ENST00000559245 HERV-K104P63124 156 aa8.9□□□□□ -0.98
CDC42BPB-205ENST00000559245 SPATA45Q537H7 98 aa8.9□□□□□ -0.98
CDC42BPB-205ENST00000559245 C12orf57Q99622 126 aa8.9□□□□□ -0.98
CDC42BPB-205ENST00000559245 PAM16Q9Y3D7 125 aa8.9□□□□□ -0.98
CDC42BPB-205ENST00000559245 LINC00587B1AMM8 73 aa8.89□□□□□ -0.99
CDC42BPB-205ENST00000559245 COX8AP10176 69 aa8.89□□□□□ -0.99
CDC42BPB-205ENST00000559245 C9orf153Q5TBE3 101 aa8.89□□□□□ -0.99
CDC42BPB-205ENST00000559245 DDTP30046 118 aa8.88□□□□□ -0.99
CDC42BPB-205ENST00000559245 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
CDC42BPB-205ENST00000559245 Q6ZRX8 168 aa8.88□□□□□ -0.99
CDC42BPB-205ENST00000559245 PCP2Q8IVA1 136 aa8.87□□□□□ -0.99
CDC42BPB-205ENST00000559245 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
CDC42BPB-205ENST00000559245 LGALS3P17931 250 aaKnown RBP8.86□□□□□ -0.99
CDC42BPB-205ENST00000559245 TTTY13Q9BZ97 58 aa8.86□□□□□ -0.99
CDC42BPB-205ENST00000559245 TRBV10-2A0A0K0K1G8 114 aa8.85□□□□□ -0.99
CDC42BPB-205ENST00000559245 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
CDC42BPB-205ENST00000559245 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
CDC42BPB-205ENST00000559245 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-205ENST00000559245 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
CDC42BPB-205ENST00000559245 ZNF815PA8K554 130 aa8.83□□□□□ -1
CDC42BPB-205ENST00000559245 TIMM17BO60830 172 aa8.83□□□□□ -1
CDC42BPB-205ENST00000559245 KRTAP10-6P60371 365 aaPredicted RBP8.83□□□□□ -1
CDC42BPB-205ENST00000559245 SLC25A34Q6PIV7 304 aa8.83□□□□□ -1
CDC42BPB-205ENST00000559245 A0A0J9YXY3 114 aa8.82□□□□□ -1
CDC42BPB-205ENST00000559245 C9orf92A6NGG3 77 aa8.82□□□□□ -1
CDC42BPB-205ENST00000559245 LITAFQ99732 161 aa8.82□□□□□ -1
CDC42BPB-205ENST00000559245 C14orf144Q96I85 54 aa8.81□□□□□ -1
CDC42BPB-205ENST00000559245 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
CDC42BPB-205ENST00000559245 HIGD1BQ9P298 99 aa8.81□□□□□ -1
CDC42BPB-205ENST00000559245 IGLV6-57P01721 117 aa8.8□□□□□ -1
CDC42BPB-205ENST00000559245 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
CDC42BPB-205ENST00000559245 C2orf91Q6ZV80 131 aa8.8□□□□□ -1
CDC42BPB-205ENST00000559245 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
CDC42BPB-205ENST00000559245 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
CDC42BPB-205ENST00000559245 TRAV23DV6A0A075B6W5 121 aa8.79□□□□□ -1
CDC42BPB-205ENST00000559245 LIMD2Q9BT23 127 aa8.79□□□□□ -1
CDC42BPB-205ENST00000559245 HRCT1Q6UXD1 115 aa8.78□□□□□ -1
CDC42BPB-205ENST00000559245 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
CDC42BPB-205ENST00000559245 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
CDC42BPB-205ENST00000559245 SPANXCQ9NY87 97 aa8.78□□□□□ -1
CDC42BPB-205ENST00000559245 TSTD3H0UI37 97 aa8.76□□□□□ -1.01
CDC42BPB-205ENST00000559245 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPB-205ENST00000559245 NDUFC2O95298 119 aa8.76□□□□□ -1.01
CDC42BPB-205ENST00000559245 Q6ZVH6 145 aa8.76□□□□□ -1.01
CDC42BPB-205ENST00000559245 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPB-205ENST00000559245 M0R2T5 61 aa8.75□□□□□ -1.01
CDC42BPB-205ENST00000559245 SCGB1D4Q6XE38 83 aa8.75□□□□□ -1.01
CDC42BPB-205ENST00000559245 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
CDC42BPB-205ENST00000559245 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
CDC42BPB-205ENST00000559245 SPRR1BP22528 89 aa8.73□□□□□ -1.01
CDC42BPB-205ENST00000559245 TAL2Q16559 108 aa8.73□□□□□ -1.01
CDC42BPB-205ENST00000559245 IFITM1P13164 125 aa8.72□□□□□ -1.01
CDC42BPB-205ENST00000559245 HINT1P49773 126 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPB-205ENST00000559245 NPC2P61916 151 aa8.71□□□□□ -1.02
CDC42BPB-205ENST00000559245 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
CDC42BPB-205ENST00000559245 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPB-205ENST00000559245 HSD52Q0P140 79 aa8.69□□□□□ -1.02
CDC42BPB-205ENST00000559245 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
CDC42BPB-205ENST00000559245 LAMTOR3Q9UHA4 124 aa8.69□□□□□ -1.02
CDC42BPB-205ENST00000559245 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
CDC42BPB-205ENST00000559245 COPS9Q8WXC6 57 aa8.68□□□□□ -1.02
CDC42BPB-205ENST00000559245 CBY1Q9Y3M2 126 aa8.68□□□□□ -1.02
CDC42BPB-205ENST00000559245 CD164Q04900 197 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms