RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MIEN1Q9BRT3 115 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 PLNP26678 52 aa8.75□□□□□ -1.01
SCFD1-224ENST00000557713 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
SCFD1-224ENST00000557713 C5orf52A6NGY3 159 aa8.74□□□□□ -1.01
SCFD1-224ENST00000557713 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-224ENST00000557713 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-224ENST00000557713 LINC00310P59036 64 aa8.74□□□□□ -1.01
SCFD1-224ENST00000557713 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
SCFD1-224ENST00000557713 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
SCFD1-224ENST00000557713 DPM2O94777 84 aa8.73□□□□□ -1.01
SCFD1-224ENST00000557713 ADAMTSL4-AS1Q5T5F5 129 aa8.73□□□□□ -1.01
SCFD1-224ENST00000557713 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
SCFD1-224ENST00000557713 LGALS3P17931 250 aaKnown RBP8.72□□□□□ -1.01
SCFD1-224ENST00000557713 HERVK_113P61574 105 aa8.72□□□□□ -1.01
SCFD1-224ENST00000557713 SERF1AO75920 110 aa8.71□□□□□ -1.02
SCFD1-224ENST00000557713 NPC2P61916 151 aa8.71□□□□□ -1.02
SCFD1-224ENST00000557713 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
SCFD1-224ENST00000557713 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
SCFD1-224ENST00000557713 IGKCP01834 107 aa8.7□□□□□ -1.02
SCFD1-224ENST00000557713 TRGC2P03986 189 aa8.7□□□□□ -1.02
SCFD1-224ENST00000557713 SPRR1BP22528 89 aa8.7□□□□□ -1.02
SCFD1-224ENST00000557713 KRTAP4-6Q9BYQ5 205 aa8.7□□□□□ -1.02
SCFD1-224ENST00000557713 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
SCFD1-224ENST00000557713 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
SCFD1-224ENST00000557713 FABP4P15090 132 aa8.68□□□□□ -1.02
SCFD1-224ENST00000557713 MT1HP80294 61 aa8.68□□□□□ -1.02
SCFD1-224ENST00000557713 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
SCFD1-224ENST00000557713 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-224ENST00000557713 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
SCFD1-224ENST00000557713 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
SCFD1-224ENST00000557713 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
SCFD1-224ENST00000557713 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
SCFD1-224ENST00000557713 SLC25A34Q6PIV7 304 aa8.65□□□□□ -1.02
SCFD1-224ENST00000557713 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
SCFD1-224ENST00000557713 E9PLD3 99 aa8.64□□□□□ -1.03
SCFD1-224ENST00000557713 LITAFQ99732 161 aa8.64□□□□□ -1.03
SCFD1-224ENST00000557713 DHRS4-AS1Q9P1J3 65 aa8.64□□□□□ -1.03
SCFD1-224ENST00000557713 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
SCFD1-224ENST00000557713 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
SCFD1-224ENST00000557713 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
SCFD1-224ENST00000557713 OR13C6PQ8NH95 151 aa8.62□□□□□ -1.03
SCFD1-224ENST00000557713 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
SCFD1-224ENST00000557713 CD164Q04900 197 aa8.6□□□□□ -1.03
SCFD1-224ENST00000557713 TIMM17BO60830 172 aa8.59□□□□□ -1.03
SCFD1-224ENST00000557713 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.03
SCFD1-224ENST00000557713 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
SCFD1-224ENST00000557713 COX7BP24311 80 aa8.58□□□□□ -1.04
SCFD1-224ENST00000557713 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-224ENST00000557713 PRO1933Q9H354 126 aa8.57□□□□□ -1.04
SCFD1-224ENST00000557713 TAL2Q16559 108 aa8.56□□□□□ -1.04
SCFD1-224ENST00000557713 Q1RN00 199 aa8.56□□□□□ -1.04
SCFD1-224ENST00000557713 C6orf99Q4VX62 202 aa8.56□□□□□ -1.04
SCFD1-224ENST00000557713 Q5XG85 94 aa8.56□□□□□ -1.04
SCFD1-224ENST00000557713 DEFB105AQ8NG35 78 aa8.56□□□□□ -1.04
SCFD1-224ENST00000557713 COLCA2A8K830 154 aa8.55□□□□□ -1.04
SCFD1-224ENST00000557713 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-224ENST00000557713 SMIM29Q86T20 159 aa8.55□□□□□ -1.04
SCFD1-224ENST00000557713 LINC00518Q8N0U6 118 aa8.55□□□□□ -1.04
SCFD1-224ENST00000557713 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
SCFD1-224ENST00000557713 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
SCFD1-224ENST00000557713 H7C2G1 150 aa8.54□□□□□ -1.04
SCFD1-224ENST00000557713 C1orf195Q5TG92 126 aa8.53□□□□□ -1.04
SCFD1-224ENST00000557713 TRBV7-6A0A0J9YX20 115 aa8.52□□□□□ -1.05
SCFD1-224ENST00000557713 AKR1D1P51857 326 aa8.52□□□□□ -1.05
SCFD1-224ENST00000557713 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
SCFD1-224ENST00000557713 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
SCFD1-224ENST00000557713 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
SCFD1-224ENST00000557713 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
SCFD1-224ENST00000557713 IGLV5-48A0A075B6I7 105 aa8.49□□□□□ -1.05
SCFD1-224ENST00000557713 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
SCFD1-224ENST00000557713 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
SCFD1-224ENST00000557713 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
SCFD1-224ENST00000557713 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-224ENST00000557713 M0R2T5 61 aa8.46□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
SCFD1-224ENST00000557713 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
SCFD1-224ENST00000557713 A6NDN8 102 aa8.42□□□□□ -1.06
SCFD1-224ENST00000557713 A4D1N5 150 aa8.41□□□□□ -1.06
SCFD1-224ENST00000557713 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
SCFD1-224ENST00000557713 IFITM1P13164 125 aa8.41□□□□□ -1.06
SCFD1-224ENST00000557713 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
SCFD1-224ENST00000557713 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
SCFD1-224ENST00000557713 TCL1BO95988 128 aa8.4□□□□□ -1.06
SCFD1-224ENST00000557713 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
SCFD1-224ENST00000557713 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
SCFD1-224ENST00000557713 Q6ZVH6 145 aa8.38□□□□□ -1.07
SCFD1-224ENST00000557713 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
SCFD1-224ENST00000557713 NHP2Q9NX24 153 aaKnown RBP8.37□□□□□ -1.07
SCFD1-224ENST00000557713 SMIM11BQ8TCY0 68 aa8.36□□□□□ -1.07
SCFD1-224ENST00000557713 KRTDAPP60985 99 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms