RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
SHMT2-230ENST00000557427 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
SHMT2-230ENST00000557427 J3QR89 54 aa7.98□□□□□ -1.13
SHMT2-230ENST00000557427 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
SHMT2-230ENST00000557427 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
SHMT2-230ENST00000557427 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
SHMT2-230ENST00000557427 H3BT86 120 aa7.97□□□□□ -1.13
SHMT2-230ENST00000557427 ANKRD29Q8N6D5 301 aa7.97□□□□□ -1.13
SHMT2-230ENST00000557427 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
SHMT2-230ENST00000557427 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.14
SHMT2-230ENST00000557427 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
SHMT2-230ENST00000557427 TRACP01848 142 aa7.96□□□□□ -1.14
SHMT2-230ENST00000557427 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-230ENST00000557427 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
SHMT2-230ENST00000557427 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
SHMT2-230ENST00000557427 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SHMT2-230ENST00000557427 H0YGX0 51 aa7.94□□□□□ -1.14
SHMT2-230ENST00000557427 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
SHMT2-230ENST00000557427 LPAP08519 4548 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 SLPIP03973 132 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 Q6ZRU5 148 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 CBY1Q9Y3M2 126 aa7.93□□□□□ -1.14
SHMT2-230ENST00000557427 SDIM1Q6ZPB5 146 aa7.92□□□□□ -1.14
SHMT2-230ENST00000557427 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
SHMT2-230ENST00000557427 PANO1I0J062 215 aa7.9□□□□□ -1.14
SHMT2-230ENST00000557427 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.14
SHMT2-230ENST00000557427 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
SHMT2-230ENST00000557427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-230ENST00000557427 Q8NDZ9 215 aa7.89□□□□□ -1.15
SHMT2-230ENST00000557427 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
SHMT2-230ENST00000557427 SYCNQ0VAF6 134 aa7.88□□□□□ -1.15
SHMT2-230ENST00000557427 A0A1B0GX51 115 aa7.87□□□□□ -1.15
SHMT2-230ENST00000557427 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
SHMT2-230ENST00000557427 NCR3O14931 201 aa7.87□□□□□ -1.15
SHMT2-230ENST00000557427 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
SHMT2-230ENST00000557427 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
SHMT2-230ENST00000557427 A0A087WYN8 130 aa7.85□□□□□ -1.15
SHMT2-230ENST00000557427 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
SHMT2-230ENST00000557427 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
SHMT2-230ENST00000557427 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
SHMT2-230ENST00000557427 DNAL4O96015 105 aa7.84□□□□□ -1.15
SHMT2-230ENST00000557427 VPREB1P12018 145 aa7.84□□□□□ -1.15
SHMT2-230ENST00000557427 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
SHMT2-230ENST00000557427 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
SHMT2-230ENST00000557427 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
SHMT2-230ENST00000557427 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
SHMT2-230ENST00000557427 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
SHMT2-230ENST00000557427 M0R378 163 aa7.81□□□□□ -1.16
SHMT2-230ENST00000557427 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SHMT2-230ENST00000557427 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
SHMT2-230ENST00000557427 Q6ZRP5 223 aa7.81□□□□□ -1.16
SHMT2-230ENST00000557427 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
SHMT2-230ENST00000557427 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
SHMT2-230ENST00000557427 SNCGO76070 127 aa7.8□□□□□ -1.16
SHMT2-230ENST00000557427 GAGE2EQ4V326 116 aa7.8□□□□□ -1.16
SHMT2-230ENST00000557427 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
SHMT2-230ENST00000557427 GAGE2DQ9UEU5 116 aa7.8□□□□□ -1.16
SHMT2-230ENST00000557427 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
SHMT2-230ENST00000557427 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
SHMT2-230ENST00000557427 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
SHMT2-230ENST00000557427 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
SHMT2-230ENST00000557427 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
SHMT2-230ENST00000557427 A0A096LNI7 61 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 C9orf129Q5T035 196 aaKnown RBP7.78□□□□□ -1.16
SHMT2-230ENST00000557427 DIRC1Q969H9 104 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
SHMT2-230ENST00000557427 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
SHMT2-230ENST00000557427 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
SHMT2-230ENST00000557427 OBSCN-AS1Q96MR7 158 aa7.76□□□□□ -1.17
SHMT2-230ENST00000557427 LOC107984640A0A0U1RRK4 108 aa7.75□□□□□ -1.17
SHMT2-230ENST00000557427 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-230ENST00000557427 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 H3BQ85 93 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 ACYP1P07311 99 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 COX7BP24311 80 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
SHMT2-230ENST00000557427 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 LINC00474Q9P2X8 69 aa7.74□□□□□ -1.17
SHMT2-230ENST00000557427 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
SHMT2-230ENST00000557427 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
SHMT2-230ENST00000557427 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
SHMT2-230ENST00000557427 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
SHMT2-230ENST00000557427 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
SHMT2-230ENST00000557427 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
SHMT2-230ENST00000557427 GHRHP01286 108 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms