RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
PPP4R3A-208ENST00000555462 A0A0J9YWU9 116 aa11.3□□□□□ -0.6
PPP4R3A-208ENST00000555462 RPS28P62857 69 aaKnown RBP11.29□□□□□ -0.6
PPP4R3A-208ENST00000555462 TRAV7A0A075B6U4 112 aa11.29□□□□□ -0.6
PPP4R3A-208ENST00000555462 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
PPP4R3A-208ENST00000555462 STAB2Q8WWQ8 2551 aa11.27□□□□□ -0.61
PPP4R3A-208ENST00000555462 VPREB1P12018 145 aa11.27□□□□□ -0.61
PPP4R3A-208ENST00000555462 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
PPP4R3A-208ENST00000555462 DEFB116Q30KQ4 102 aa11.26□□□□□ -0.61
PPP4R3A-208ENST00000555462 NREPQ16612 68 aa11.26□□□□□ -0.61
PPP4R3A-208ENST00000555462 SERTAD4-AS1Q5TG53 156 aa11.26□□□□□ -0.61
PPP4R3A-208ENST00000555462 PRR4Q16378 134 aa11.25□□□□□ -0.61
PPP4R3A-208ENST00000555462 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
PPP4R3A-208ENST00000555462 ESRGQ1W209 222 aa11.24□□□□□ -0.61
PPP4R3A-208ENST00000555462 ST20-AS1Q8NBB2 130 aa11.24□□□□□ -0.61
PPP4R3A-208ENST00000555462 FAM30AQ9NZY2 134 aa11.24□□□□□ -0.61
PPP4R3A-208ENST00000555462 ELOF1P60002 83 aaKnown RBP11.24□□□□□ -0.61
PPP4R3A-208ENST00000555462 C1orf43Q9BWL3 253 aa11.23□□□□□ -0.61
PPP4R3A-208ENST00000555462 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
PPP4R3A-208ENST00000555462 MIFP14174 115 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 CASC10Q5T4H9 136 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 TRBV7-4A0A0J9YYF1 115 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 HIGD2AQ9BW72 106 aa11.22□□□□□ -0.61
PPP4R3A-208ENST00000555462 M0R378 163 aa11.19□□□□□ -0.62
PPP4R3A-208ENST00000555462 A0A0U1RQV1 116 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 FAM229BQ4G0N7 80 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
PPP4R3A-208ENST00000555462 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
PPP4R3A-208ENST00000555462 LYSTQ99698 3801 aa11.16□□□□□ -0.62
PPP4R3A-208ENST00000555462 FP248Q71RG6 208 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3A-208ENST00000555462 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
PPP4R3A-208ENST00000555462 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
PPP4R3A-208ENST00000555462 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
PPP4R3A-208ENST00000555462 CXCL6P80162 114 aa11.15□□□□□ -0.62
PPP4R3A-208ENST00000555462 Q8N377 158 aa11.14□□□□□ -0.63
PPP4R3A-208ENST00000555462 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
PPP4R3A-208ENST00000555462 EGFEM1PQ0D2K5 195 aa11.14□□□□□ -0.63
PPP4R3A-208ENST00000555462 IGKV4-1P06312 121 aa11.13□□□□□ -0.63
PPP4R3A-208ENST00000555462 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
PPP4R3A-208ENST00000555462 SERP1Q9Y6X1 66 aa11.13□□□□□ -0.63
PPP4R3A-208ENST00000555462 ERC2-IT1O76042 136 aa11.13□□□□□ -0.63
PPP4R3A-208ENST00000555462 BRK1Q8WUW1 75 aa11.12□□□□□ -0.63
PPP4R3A-208ENST00000555462 J3QKU1 62 aa11.12□□□□□ -0.63
PPP4R3A-208ENST00000555462 PDE6GP18545 87 aa11.12□□□□□ -0.63
PPP4R3A-208ENST00000555462 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
PPP4R3A-208ENST00000555462 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
PPP4R3A-208ENST00000555462 UBE2BP63146 152 aa11.11□□□□□ -0.63
PPP4R3A-208ENST00000555462 KRTAP26-1Q6PEX3 210 aa11.11□□□□□ -0.63
PPP4R3A-208ENST00000555462 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
PPP4R3A-208ENST00000555462 GVQW2A0A096LPI5 108 aaPredicted RBP11.1□□□□□ -0.63
PPP4R3A-208ENST00000555462 A0A096LNI7 61 aa11.09□□□□□ -0.63
PPP4R3A-208ENST00000555462 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
PPP4R3A-208ENST00000555462 DNAH10Q8IVF4 4471 aa11.07□□□□□ -0.64
PPP4R3A-208ENST00000555462 Q9BRP9 147 aa11.07□□□□□ -0.64
PPP4R3A-208ENST00000555462 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
PPP4R3A-208ENST00000555462 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
PPP4R3A-208ENST00000555462 WFDC13Q8IUB5 93 aa11.04□□□□□ -0.64
PPP4R3A-208ENST00000555462 PRYO14603 147 aa11.03□□□□□ -0.64
PPP4R3A-208ENST00000555462 FUSP35637 526 aaKnown RBP eCLIP11.03□□□□□ -0.64
PPP4R3A-208ENST00000555462 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
PPP4R3A-208ENST00000555462 PRLHP81277 87 aa11.03□□□□□ -0.64
PPP4R3A-208ENST00000555462 K7EQZ3 153 aa11.02□□□□□ -0.64
PPP4R3A-208ENST00000555462 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
PPP4R3A-208ENST00000555462 OCR1Q9BZK8 76 aa11.01□□□□□ -0.65
PPP4R3A-208ENST00000555462 SMIM26A0A096LP01 95 aa11.01□□□□□ -0.65
PPP4R3A-208ENST00000555462 RPL37AP61513 92 aaKnown RBP11.01□□□□□ -0.65
PPP4R3A-208ENST00000555462 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
PPP4R3A-208ENST00000555462 KRTAP7-1Q8IUC3 87 aa10.98□□□□□ -0.65
PPP4R3A-208ENST00000555462 Q6ZRX8 168 aa10.97□□□□□ -0.65
PPP4R3A-208ENST00000555462 KCNQ1DNQ9H478 68 aa10.96□□□□□ -0.65
PPP4R3A-208ENST00000555462 PSPHP1O15172 72 aa10.94□□□□□ -0.66
PPP4R3A-208ENST00000555462 LINC00588Q9Y4M8 146 aa10.93□□□□□ -0.66
PPP4R3A-208ENST00000555462 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
PPP4R3A-208ENST00000555462 A0A087WSZ3 146 aa10.92□□□□□ -0.66
PPP4R3A-208ENST00000555462 DSCR10P59022 87 aa10.92□□□□□ -0.66
PPP4R3A-208ENST00000555462 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
PPP4R3A-208ENST00000555462 CHTF8P0CG12 524 aa10.91□□□□□ -0.66
PPP4R3A-208ENST00000555462 H3BQ85 93 aa10.9□□□□□ -0.66
PPP4R3A-208ENST00000555462 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
PPP4R3A-208ENST00000555462 LINC00476Q8WZB0 136 aa10.89□□□□□ -0.67
PPP4R3A-208ENST00000555462 NDUFC1O43677 76 aa10.88□□□□□ -0.67
PPP4R3A-208ENST00000555462 BCE1O60756 84 aa10.88□□□□□ -0.67
PPP4R3A-208ENST00000555462 Q8NBF4 154 aa10.88□□□□□ -0.67
PPP4R3A-208ENST00000555462 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
PPP4R3A-208ENST00000555462 PRO0628Q9UI54 55 aa10.88□□□□□ -0.67
PPP4R3A-208ENST00000555462 PSCAO43653 123 aa10.86□□□□□ -0.67
PPP4R3A-208ENST00000555462 DHRS4-AS1Q9P1J3 65 aa10.86□□□□□ -0.67
PPP4R3A-208ENST00000555462 C1orf64Q8NEQ6 169 aa10.85□□□□□ -0.67
PPP4R3A-208ENST00000555462 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
PPP4R3A-208ENST00000555462 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
PPP4R3A-208ENST00000555462 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
PPP4R3A-208ENST00000555462 LINC00208Q96KT6 92 aa10.82□□□□□ -0.68
PPP4R3A-208ENST00000555462 WIPF1O43516 503 aa10.82□□□□□ -0.68
PPP4R3A-208ENST00000555462 KRTAP24-1Q3LI83 254 aa10.8□□□□□ -0.68
PPP4R3A-208ENST00000555462 A8MU10 97 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms