RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
SHMT2-216ENST00000554975 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
SHMT2-216ENST00000554975 LECT2O14960 151 aa7.34□□□□□ -1.23
SHMT2-216ENST00000554975 Q6ZRN7 208 aaPredicted RBP7.34□□□□□ -1.23
SHMT2-216ENST00000554975 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
SHMT2-216ENST00000554975 IMUPQ9GZP8 106 aa7.34□□□□□ -1.23
SHMT2-216ENST00000554975 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
SHMT2-216ENST00000554975 Q8N3U1 123 aa7.33□□□□□ -1.24
SHMT2-216ENST00000554975 A0A087WYN8 130 aa7.32□□□□□ -1.24
SHMT2-216ENST00000554975 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
SHMT2-216ENST00000554975 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
SHMT2-216ENST00000554975 RMI2Q96E14 147 aa7.32□□□□□ -1.24
SHMT2-216ENST00000554975 CAMK2N2Q96S95 79 aa7.32□□□□□ -1.24
SHMT2-216ENST00000554975 TRBV7-7A0A0K0K1E9 115 aa7.31□□□□□ -1.24
SHMT2-216ENST00000554975 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
SHMT2-216ENST00000554975 UNQ6190/PRO20217Q6UXQ8 127 aa7.31□□□□□ -1.24
SHMT2-216ENST00000554975 NCR3O14931 201 aa7.3□□□□□ -1.24
SHMT2-216ENST00000554975 DNAH10OSP0CZ25 163 aa7.3□□□□□ -1.24
SHMT2-216ENST00000554975 OBSCN-AS1Q96MR7 158 aa7.3□□□□□ -1.24
SHMT2-216ENST00000554975 Q9HAA7 133 aa7.3□□□□□ -1.24
SHMT2-216ENST00000554975 TRBV7-6A0A0J9YX20 115 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
SHMT2-216ENST00000554975 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 Q8N814 137 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
SHMT2-216ENST00000554975 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
SHMT2-216ENST00000554975 FAM229AH3BQW9 127 aa7.28□□□□□ -1.24
SHMT2-216ENST00000554975 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
SHMT2-216ENST00000554975 C9orf116Q5BN46 136 aaPredicted RBP7.28□□□□□ -1.24
SHMT2-216ENST00000554975 ANAPC13Q9BS18 74 aa7.28□□□□□ -1.24
SHMT2-216ENST00000554975 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
SHMT2-216ENST00000554975 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
SHMT2-216ENST00000554975 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
SHMT2-216ENST00000554975 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
SHMT2-216ENST00000554975 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
SHMT2-216ENST00000554975 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
SHMT2-216ENST00000554975 SERTAD4-AS1Q5TG53 156 aa7.26□□□□□ -1.25
SHMT2-216ENST00000554975 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
SHMT2-216ENST00000554975 LINC00575Q6W349 94 aa7.26□□□□□ -1.25
SHMT2-216ENST00000554975 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
SHMT2-216ENST00000554975 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 M0R378 163 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 PLA2G2DQ9UNK4 145 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
SHMT2-216ENST00000554975 PDE6GP18545 87 aa7.24□□□□□ -1.25
SHMT2-216ENST00000554975 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
SHMT2-216ENST00000554975 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
SHMT2-216ENST00000554975 A0A087WTM6 91 aa7.23□□□□□ -1.25
SHMT2-216ENST00000554975 VPREB1P12018 145 aa7.23□□□□□ -1.25
SHMT2-216ENST00000554975 NDUFV3P56181 108 aaKnown RBP7.23□□□□□ -1.25
SHMT2-216ENST00000554975 Q6JHZ5 121 aa7.23□□□□□ -1.25
SHMT2-216ENST00000554975 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
SHMT2-216ENST00000554975 C14orf132Q9NPU4 83 aa7.23□□□□□ -1.25
SHMT2-216ENST00000554975 TRBV10-3A0A0K0K1G6 114 aa7.22□□□□□ -1.25
SHMT2-216ENST00000554975 TLX1NBP0CAT3 122 aa7.22□□□□□ -1.25
SHMT2-216ENST00000554975 COX7BP24311 80 aa7.22□□□□□ -1.25
SHMT2-216ENST00000554975 Q6ZRU5 148 aa7.22□□□□□ -1.25
SHMT2-216ENST00000554975 PSCAO43653 123 aa7.21□□□□□ -1.26
SHMT2-216ENST00000554975 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
SHMT2-216ENST00000554975 CCKP06307 115 aa7.21□□□□□ -1.26
SHMT2-216ENST00000554975 LINC00526Q96FQ7 95 aa7.21□□□□□ -1.26
SHMT2-216ENST00000554975 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.26
SHMT2-216ENST00000554975 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
SHMT2-216ENST00000554975 PRR3P79522 188 aaKnown RBP7.2□□□□□ -1.26
SHMT2-216ENST00000554975 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
SHMT2-216ENST00000554975 XAGE1AQ9HD64 81 aa7.2□□□□□ -1.26
SHMT2-216ENST00000554975 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
SHMT2-216ENST00000554975 SLPIP03973 132 aa7.19□□□□□ -1.26
SHMT2-216ENST00000554975 Q8NDZ9 215 aa7.19□□□□□ -1.26
SHMT2-216ENST00000554975 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
SHMT2-216ENST00000554975 SMCR5Q8TEV8 140 aa7.18□□□□□ -1.26
SHMT2-216ENST00000554975 RNF213Q63HN8 5207 aa7.18□□□□□ -1.26
SHMT2-216ENST00000554975 LRP2P98164 4655 aa7.18□□□□□ -1.26
SHMT2-216ENST00000554975 RBM3P98179 157 aaKnown RBP7.17□□□□□ -1.26
SHMT2-216ENST00000554975 UBL5Q9BZL1 73 aa7.17□□□□□ -1.26
SHMT2-216ENST00000554975 LAMTOR3Q9UHA4 124 aa7.17□□□□□ -1.26
SHMT2-216ENST00000554975 IGLV5-37A0A075B6J1 123 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 PRYO14603 147 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 Q6ZQY7 126 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
SHMT2-216ENST00000554975 ATOX1O00244 68 aa7.15□□□□□ -1.26
SHMT2-216ENST00000554975 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
SHMT2-216ENST00000554975 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
SHMT2-216ENST00000554975 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
SHMT2-216ENST00000554975 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
SHMT2-216ENST00000554975 KRTAP10-4P60372 401 aaPredicted RBP7.14□□□□□ -1.27
SHMT2-216ENST00000554975 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
SHMT2-216ENST00000554975 LOC107984640A0A0U1RRK4 108 aa7.13□□□□□ -1.27
SHMT2-216ENST00000554975 Q6ZRP5 223 aa7.13□□□□□ -1.27
SHMT2-216ENST00000554975 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
SHMT2-216ENST00000554975 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
SHMT2-216ENST00000554975 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
SHMT2-216ENST00000554975 Q6ZQT0 140 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms