RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 Q6ZTC4 211 aa10.89□□□□□ -0.67
XRCC3-209ENST00000554913 ESRGQ1W209 222 aa10.89□□□□□ -0.67
XRCC3-209ENST00000554913 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
XRCC3-209ENST00000554913 SERP1Q9Y6X1 66 aa10.87□□□□□ -0.67
XRCC3-209ENST00000554913 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
XRCC3-209ENST00000554913 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 BPY2O14599 106 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 H3BNG1 76 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 NREPQ16612 68 aa10.86□□□□□ -0.67
XRCC3-209ENST00000554913 BAHCC1Q9P281 2608 aa10.85□□□□□ -0.67
XRCC3-209ENST00000554913 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
XRCC3-209ENST00000554913 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
XRCC3-209ENST00000554913 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
XRCC3-209ENST00000554913 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
XRCC3-209ENST00000554913 WIPF1O43516 503 aa10.83□□□□□ -0.68
XRCC3-209ENST00000554913 TENM3Q9P273 2699 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 OXLD1Q5BKU9 147 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 Q8N377 158 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 C7orf33Q8WU49 177 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 MAST4O15021 2626 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
XRCC3-209ENST00000554913 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
XRCC3-209ENST00000554913 LINC01556Q5JQF7 62 aa10.79□□□□□ -0.68
XRCC3-209ENST00000554913 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
XRCC3-209ENST00000554913 NDUFC1O43677 76 aa10.78□□□□□ -0.68
XRCC3-209ENST00000554913 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.69
XRCC3-209ENST00000554913 OCR1Q9BZK8 76 aa10.77□□□□□ -0.69
XRCC3-209ENST00000554913 COL6A5A8TX70 2615 aa10.76□□□□□ -0.69
XRCC3-209ENST00000554913 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
XRCC3-209ENST00000554913 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
XRCC3-209ENST00000554913 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
XRCC3-209ENST00000554913 F8WDY8 70 aa10.75□□□□□ -0.69
XRCC3-209ENST00000554913 FP248Q71RG6 208 aaPredicted RBP10.74□□□□□ -0.69
XRCC3-209ENST00000554913 Q9BRP9 147 aa10.74□□□□□ -0.69
XRCC3-209ENST00000554913 ERC2-IT1O76042 136 aa10.74□□□□□ -0.69
XRCC3-209ENST00000554913 A0A1W2PNM2 257 aa10.73□□□□□ -0.69
XRCC3-209ENST00000554913 Q6ZRX8 168 aa10.73□□□□□ -0.69
XRCC3-209ENST00000554913 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
XRCC3-209ENST00000554913 ST20-AS1Q8NBB2 130 aa10.72□□□□□ -0.69
XRCC3-209ENST00000554913 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
XRCC3-209ENST00000554913 SMIM26A0A096LP01 95 aa10.71□□□□□ -0.69
XRCC3-209ENST00000554913 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.69
XRCC3-209ENST00000554913 LINC00474Q9P2X8 69 aa10.71□□□□□ -0.69
XRCC3-209ENST00000554913 A0A0U1RQV1 116 aa10.71□□□□□ -0.7
XRCC3-209ENST00000554913 CASC10Q5T4H9 136 aa10.71□□□□□ -0.7
XRCC3-209ENST00000554913 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.7
XRCC3-209ENST00000554913 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.72e-6■■■□□ 17.8
XRCC3-209ENST00000554913 IGLV1-50A0A075B6I6 118 aa10.69□□□□□ -0.7
XRCC3-209ENST00000554913 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
XRCC3-209ENST00000554913 KRTAP7-1Q8IUC3 87 aa10.69□□□□□ -0.7
XRCC3-209ENST00000554913 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
XRCC3-209ENST00000554913 PRYO14603 147 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 DNAH10OSP0CZ25 163 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 ETDCA0A1B0GVM5 59 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
XRCC3-209ENST00000554913 TNP2Q05952 138 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 HIGD2AQ9BW72 106 aa10.68□□□□□ -0.7
XRCC3-209ENST00000554913 SMIM29Q86T20 159 aa10.67□□□□□ -0.7
XRCC3-209ENST00000554913 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
XRCC3-209ENST00000554913 DNAH3Q8TD57 4116 aa10.67□□□□□ -0.7
XRCC3-209ENST00000554913 SPRR1AP35321 89 aa10.66□□□□□ -0.7
XRCC3-209ENST00000554913 LINC00336Q6ZUF6 198 aa10.66□□□□□ -0.7
XRCC3-209ENST00000554913 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
XRCC3-209ENST00000554913 NBEAL1Q6ZS30 2694 aa10.66□□□□□ -0.7
XRCC3-209ENST00000554913 Q8NBF4 154 aa10.64□□□□□ -0.71
XRCC3-209ENST00000554913 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
XRCC3-209ENST00000554913 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
XRCC3-209ENST00000554913 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
XRCC3-209ENST00000554913 LINC00588Q9Y4M8 146 aa10.62□□□□□ -0.71
XRCC3-209ENST00000554913 A0A1B0GW54 56 aa10.61□□□□□ -0.71
XRCC3-209ENST00000554913 UBE2BP63146 152 aa10.61□□□□□ -0.71
XRCC3-209ENST00000554913 DSCR10P59022 87 aa10.6□□□□□ -0.71
XRCC3-209ENST00000554913 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
XRCC3-209ENST00000554913 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
XRCC3-209ENST00000554913 A0A0G2JQZ4 141 aa10.59□□□□□ -0.71
XRCC3-209ENST00000554913 A0A1W2PNN7 141 aa10.59□□□□□ -0.71
XRCC3-209ENST00000554913 K7EQZ3 153 aa10.58□□□□□ -0.72
XRCC3-209ENST00000554913 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
XRCC3-209ENST00000554913 LCE6AA0A183 80 aa10.55□□□□□ -0.72
XRCC3-209ENST00000554913 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
XRCC3-209ENST00000554913 REG3GQ6UW15 175 aa10.54□□□□□ -0.72
XRCC3-209ENST00000554913 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
XRCC3-209ENST00000554913 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
XRCC3-209ENST00000554913 DEFB116Q30KQ4 102 aa10.5□□□□□ -0.73
XRCC3-209ENST00000554913 DNAH1Q9P2D7 4330 aa10.5□□□□□ -0.73
XRCC3-209ENST00000554913 PRB2P02812 416 aaPredicted RBP10.49□□□□□ -0.73
XRCC3-209ENST00000554913 IGFL1Q6UW32 110 aa10.49□□□□□ -0.73
XRCC3-209ENST00000554913 PSCAO43653 123 aa10.48□□□□□ -0.73
XRCC3-209ENST00000554913 PRLHP81277 87 aa10.48□□□□□ -0.73
XRCC3-209ENST00000554913 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
XRCC3-209ENST00000554913 HCG22E2RYF7 251 aa10.47□□□□□ -0.73
XRCC3-209ENST00000554913 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.47□□□□□ -0.73
XRCC3-209ENST00000554913 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.73
XRCC3-209ENST00000554913 IGKV2-24A0A0C4DH68 120 aa10.46□□□□□ -0.74
XRCC3-209ENST00000554913 A0A096LNI7 61 aa10.45□□□□□ -0.74
XRCC3-209ENST00000554913 hDV103S1A0JD37 113 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms