RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 H3BPC8 53 aa10.25□□□□□ -0.77
ARHGEF40-202ENST00000553709 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
ARHGEF40-202ENST00000553709 USP24Q9UPU5 2620 aa10.25□□□□□ -0.77
ARHGEF40-202ENST00000553709 GIG44P09565 113 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF40-202ENST00000553709 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
ARHGEF40-202ENST00000553709 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
ARHGEF40-202ENST00000553709 FAM168BA1KXE4 195 aa10.22□□□□□ -0.77
ARHGEF40-202ENST00000553709 C19orf73Q9NVV2 129 aa10.22□□□□□ -0.77
ARHGEF40-202ENST00000553709 TRAV22A0A0B4J277 110 aa10.22□□□□□ -0.77
ARHGEF40-202ENST00000553709 RTL8CO15255 209 aa10.22□□□□□ -0.77
ARHGEF40-202ENST00000553709 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
ARHGEF40-202ENST00000553709 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
ARHGEF40-202ENST00000553709 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
ARHGEF40-202ENST00000553709 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.77
ARHGEF40-202ENST00000553709 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.78
ARHGEF40-202ENST00000553709 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.78
ARHGEF40-202ENST00000553709 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
ARHGEF40-202ENST00000553709 ACYP2P14621 99 aa10.19□□□□□ -0.78
ARHGEF40-202ENST00000553709 WWC2-AS2Q96NR7 200 aa10.19□□□□□ -0.78
ARHGEF40-202ENST00000553709 F8P00451 2351 aa10.19□□□□□ -0.78
ARHGEF40-202ENST00000553709 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
ARHGEF40-202ENST00000553709 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
ARHGEF40-202ENST00000553709 CENPEQ02224 2701 aa10.17□□□□□ -0.78
ARHGEF40-202ENST00000553709 FLNAP21333 2647 aaKnown RBP10.17□□□□□ -0.78
ARHGEF40-202ENST00000553709 FLNBO75369 2602 aaKnown RBP10.17□□□□□ -0.78
ARHGEF40-202ENST00000553709 A0A1B0GU69 56 aa10.16□□□□□ -0.78
ARHGEF40-202ENST00000553709 K7EQZ3 153 aa10.16□□□□□ -0.78
ARHGEF40-202ENST00000553709 C15orf56Q8N910 161 aa10.15□□□□□ -0.78
ARHGEF40-202ENST00000553709 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
ARHGEF40-202ENST00000553709 FAM229AH3BQW9 127 aa10.15□□□□□ -0.79
ARHGEF40-202ENST00000553709 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
ARHGEF40-202ENST00000553709 A8MWP4 228 aa10.14□□□□□ -0.79
ARHGEF40-202ENST00000553709 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
ARHGEF40-202ENST00000553709 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
ARHGEF40-202ENST00000553709 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
ARHGEF40-202ENST00000553709 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
ARHGEF40-202ENST00000553709 LINC00313P59037 77 aa10.13□□□□□ -0.79
ARHGEF40-202ENST00000553709 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
ARHGEF40-202ENST00000553709 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
ARHGEF40-202ENST00000553709 KRTAP10-3P60369 221 aa10.12□□□□□ -0.79
ARHGEF40-202ENST00000553709 CELSR3Q9NYQ7 3312 aa10.11□□□□□ -0.79
ARHGEF40-202ENST00000553709 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
ARHGEF40-202ENST00000553709 IGFL1Q6UW32 110 aa10.09□□□□□ -0.79
ARHGEF40-202ENST00000553709 ZNF575Q86XF7 245 aa10.08□□□□□ -0.8
ARHGEF40-202ENST00000553709 Q8N377 158 aa10.08□□□□□ -0.8
ARHGEF40-202ENST00000553709 FRYLO94915 3013 aa10.08□□□□□ -0.8
ARHGEF40-202ENST00000553709 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
ARHGEF40-202ENST00000553709 CR1P17927 2039 aa10.07□□□□□ -0.8
ARHGEF40-202ENST00000553709 LOC101927531A0A1B0GV80 90 aa10.06□□□□□ -0.8
ARHGEF40-202ENST00000553709 KLKP1Q107X0 134 aa10.05□□□□□ -0.8
ARHGEF40-202ENST00000553709 K7EIL1 84 aa10.05□□□□□ -0.8
ARHGEF40-202ENST00000553709 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
ARHGEF40-202ENST00000553709 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
ARHGEF40-202ENST00000553709 PLA2G2DQ9UNK4 145 aa10.03□□□□□ -0.8
ARHGEF40-202ENST00000553709 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
ARHGEF40-202ENST00000553709 A8MUN3 132 aa10.02□□□□□ -0.8
ARHGEF40-202ENST00000553709 PRR15Q8IV56 129 aa10.01□□□□□ -0.81
ARHGEF40-202ENST00000553709 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
ARHGEF40-202ENST00000553709 SPEGQ15772 3267 aa10□□□□□ -0.81
ARHGEF40-202ENST00000553709 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
ARHGEF40-202ENST00000553709 COA5Q86WW8 74 aa9.98□□□□□ -0.81
ARHGEF40-202ENST00000553709 Q96NJ1 140 aa9.98□□□□□ -0.81
ARHGEF40-202ENST00000553709 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
ARHGEF40-202ENST00000553709 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
ARHGEF40-202ENST00000553709 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
ARHGEF40-202ENST00000553709 A0A0G2JQZ4 141 aa9.96□□□□□ -0.81
ARHGEF40-202ENST00000553709 A0A1W2PNN7 141 aa9.96□□□□□ -0.81
ARHGEF40-202ENST00000553709 CD164Q04900 197 aa9.96□□□□□ -0.81
ARHGEF40-202ENST00000553709 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.81
ARHGEF40-202ENST00000553709 FRYQ5TBA9 3013 aa9.96□□□□□ -0.81
ARHGEF40-202ENST00000553709 H7BZZ5 65 aa9.96□□□□□ -0.82
ARHGEF40-202ENST00000553709 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
ARHGEF40-202ENST00000553709 MGAM2Q2M2H8 2515 aa9.95□□□□□ -0.82
ARHGEF40-202ENST00000553709 ZNF861PO60384 105 aa9.94□□□□□ -0.82
ARHGEF40-202ENST00000553709 FREM2Q5SZK8 3169 aa9.92□□□□□ -0.82
ARHGEF40-202ENST00000553709 LINC01600Q96MT4 127 aa9.92□□□□□ -0.82
ARHGEF40-202ENST00000553709 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
ARHGEF40-202ENST00000553709 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
ARHGEF40-202ENST00000553709 OBSCN-AS1Q96MR7 158 aa9.92□□□□□ -0.82
ARHGEF40-202ENST00000553709 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
ARHGEF40-202ENST00000553709 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
ARHGEF40-202ENST00000553709 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
ARHGEF40-202ENST00000553709 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
ARHGEF40-202ENST00000553709 A0A087WTM6 91 aa9.9□□□□□ -0.82
ARHGEF40-202ENST00000553709 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
ARHGEF40-202ENST00000553709 J3QL48 77 aa9.9□□□□□ -0.82
ARHGEF40-202ENST00000553709 DSCR10P59022 87 aa9.89□□□□□ -0.83
ARHGEF40-202ENST00000553709 USP34Q70CQ2 3546 aa9.89□□□□□ -0.83
ARHGEF40-202ENST00000553709 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
ARHGEF40-202ENST00000553709 FLNCQ14315 2725 aa9.86□□□□□ -0.83
ARHGEF40-202ENST00000553709 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
ARHGEF40-202ENST00000553709 ATMQ13315 3056 aa9.86□□□□□ -0.83
ARHGEF40-202ENST00000553709 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
ARHGEF40-202ENST00000553709 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
ARHGEF40-202ENST00000553709 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
ARHGEF40-202ENST00000553709 ATRQ13535 2644 aa9.84□□□□□ -0.84
ARHGEF40-202ENST00000553709 ANAPC11Q9NYG5 84 aa9.83□□□□□ -0.84
ARHGEF40-202ENST00000553709 MAP1AP78559 2803 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF40-202ENST00000553709 APLNQ9ULZ1 77 aa9.83□□□□□ -0.84
ARHGEF40-202ENST00000553709 SPRR4Q96PI1 79 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms