RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SMIM15Q7Z3B0 74 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 Q8NDZ9 215 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 TMEM126AQ9H061 195 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 MED9Q9NWA0 146 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 TGIF2-C20orf24A0A0A6YYL0 155 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 BORCS7-ASMTA0A0B4J1R7 106 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 M0R378 163 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 RAB5AP20339 215 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 S100A1P23297 94 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 CKS1BP61024 79 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 HBBP68871 147 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 HRCT1Q6UXD1 115 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 TMEM136Q6ZRR5 245 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 TP73-AS1Q9UF72 201 aa1.84□□□□□ -2.11
ATXN3-217ENST00000553287 SPINK1P00995 79 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 PFN2P35080 140 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
ATXN3-217ENST00000553287 TEX261Q6UWH6 196 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 SLC51BQ86UW2 128 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 MBD3L1Q8WWY6 194 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 TCEAL7Q9BRU2 100 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
ATXN3-217ENST00000553287 KMT2DO14686 5537 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 F8VRH5 84 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 ARPC5O15511 151 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 PDZD11Q5EBL8 140 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 SMCR5Q8TEV8 140 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 TIMM21Q9BVV7 248 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 TMEM191AQ9H0A3 160 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 SPANXB1Q9NS25 103 aaPredicted RBP1.82□□□□□ -2.12
ATXN3-217ENST00000553287 CDKN2A-AS1Q9UH64 79 aa1.82□□□□□ -2.12
ATXN3-217ENST00000553287 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ATXN3-217ENST00000553287 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 A0A1B0GV72 72 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 LOC105371267A0A1B0GV96 52 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 SLC25A20O43772 301 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 MRPS36P82909 103 aaKnown RBP1.81□□□□□ -2.12
ATXN3-217ENST00000553287 CD164Q04900 197 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 ADM2Q7Z4H4 148 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 Q8IZM0 81 aa1.81□□□□□ -2.12
ATXN3-217ENST00000553287 EIF5A2Q9GZV4 153 aaKnown RBP1.81□□□□□ -2.12
ATXN3-217ENST00000553287 LOC389332A0A1B0GUA5 103 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 A0A1B0GUT8 65 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 FAM240AA0A1B0GVK7 77 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 H7C2G1 150 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 NPYP01303 97 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 SPINK8P0C7L1 97 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 G0S2P27469 103 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 SMAGPQ0VAQ4 97 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 C9orf153Q5TBE3 101 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 FAM19A3Q7Z5A8 133 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 ZNF625Q96I27 306 aaPredicted RBP1.8□□□□□ -2.12
ATXN3-217ENST00000553287 TMEM141Q96I45 108 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 SMIM2Q9BVW6 85 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 SPANXA1Q9NS26 97 aa1.8□□□□□ -2.12
ATXN3-217ENST00000553287 A8MWL6 223 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 D6R8Y8 96 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 CKS2P33552 79 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 IFI27P40305 119 aaPredicted RBP1.79□□□□□ -2.12
ATXN3-217ENST00000553287 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
ATXN3-217ENST00000553287 RPL23P62829 140 aaKnown RBP1.79□□□□□ -2.12
ATXN3-217ENST00000553287 NDUFA5Q16718 116 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 FAM104BQ5XKR9 115 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 FAM19A2Q8N3H0 131 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 BORCS7Q96B45 105 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 SND1-IT1Q9HBX3 110 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 MANBALQ9NQG1 85 aa1.79□□□□□ -2.12
ATXN3-217ENST00000553287 A0A0G2JQZ4 141 aa1.78□□□□□ -2.12
ATXN3-217ENST00000553287 NCR3O14931 201 aa1.78□□□□□ -2.12
ATXN3-217ENST00000553287 PDE6DO43924 150 aa1.78□□□□□ -2.12
ATXN3-217ENST00000553287 SMIM12Q96EX1 92 aa1.78□□□□□ -2.12
ATXN3-217ENST00000553287 GNB1LQ9BYB4 327 aa1.78□□□□□ -2.12
ATXN3-217ENST00000553287 TRBV24-1A0A075B6N3 115 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 SMIM26A0A096LP01 95 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 TINCRA0A1B0GVN0 87 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 UMAD1C9J7I0 102 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 C4orf26Q17RF5 130 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 MRPL54Q6P161 138 aaKnown RBP1.77□□□□□ -2.13
ATXN3-217ENST00000553287 SSBP3-AS1Q7Z2R9 100 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 AMELXQ99217 191 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 C20orf78Q9BR46 151 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 C2orf88Q9BSF0 95 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 BIN3Q9NQY0 253 aa1.77□□□□□ -2.13
ATXN3-217ENST00000553287 ZNF706Q9Y5V0 76 aaPredicted RBP1.77□□□□□ -2.13
ATXN3-217ENST00000553287 ETDCA0A1B0GVM5 59 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 TSTD3H0UI37 97 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 LINC00614P0C842 121 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 SCGB1A1P11684 91 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 ADCYAP1P18509 176 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
ATXN3-217ENST00000553287 Q9BRP9 147 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 V9GYV3 84 aa1.76□□□□□ -2.13
ATXN3-217ENST00000553287 A0A1B0GXF2 115 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 PPP1R17O96001 155 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms