RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF73O43830 326 aaPredicted RBP6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 NPC2P61916 151 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 CTAG1AP78358 180 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 SPATA45Q537H7 98 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 TTTY13Q9BZ97 58 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 HIGD1BQ9P298 99 aa6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
TRAFD1-208ENST00000552890 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 A6NJY4 79 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 SNCGO76070 127 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 VAMP3Q15836 100 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 PAM16Q9Y3D7 125 aa6.21□□□□□ -1.42
TRAFD1-208ENST00000552890 A6NDN8 102 aa6.2□□□□□ -1.42
TRAFD1-208ENST00000552890 TAL2Q16559 108 aa6.2□□□□□ -1.42
TRAFD1-208ENST00000552890 Q6ZRX8 168 aa6.2□□□□□ -1.42
TRAFD1-208ENST00000552890 Q8NDZ9 215 aa6.2□□□□□ -1.42
TRAFD1-208ENST00000552890 NHP2Q9NX24 153 aaKnown RBP6.2□□□□□ -1.42
TRAFD1-208ENST00000552890 PRLHP81277 87 aa6.19□□□□□ -1.42
TRAFD1-208ENST00000552890 A0A1B0GWB2 263 aa6.18□□□□□ -1.42
TRAFD1-208ENST00000552890 B5MCH6 92 aa6.18□□□□□ -1.42
TRAFD1-208ENST00000552890 KRTAP4-16G5E9R7 235 aaPredicted RBP6.18□□□□□ -1.42
TRAFD1-208ENST00000552890 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
TRAFD1-208ENST00000552890 SLC25A20O43772 301 aa6.17□□□□□ -1.42
TRAFD1-208ENST00000552890 C14orf144Q96I85 54 aa6.17□□□□□ -1.42
TRAFD1-208ENST00000552890 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
TRAFD1-208ENST00000552890 COX7BP24311 80 aa6.16□□□□□ -1.42
TRAFD1-208ENST00000552890 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
TRAFD1-208ENST00000552890 GHRHP01286 108 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 PYY3Q5JQD4 70 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 BVES-AS1Q5T3Y7 98 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 SMCR5Q8TEV8 140 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 UQCR10Q9UDW1 63 aa6.15□□□□□ -1.42
TRAFD1-208ENST00000552890 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 ELOF1P60002 83 aaKnown RBP6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 RAB37Q96AX2 223 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
TRAFD1-208ENST00000552890 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
TRAFD1-208ENST00000552890 C6orf99Q4VX62 202 aa6.13□□□□□ -1.43
TRAFD1-208ENST00000552890 SMIM6P0DI80 62 aa6.12□□□□□ -1.43
TRAFD1-208ENST00000552890 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
TRAFD1-208ENST00000552890 A0A0B4J2C4 111 aa6.11□□□□□ -1.43
TRAFD1-208ENST00000552890 HSD52Q0P140 79 aa6.11□□□□□ -1.43
TRAFD1-208ENST00000552890 LINC00483Q53H64 154 aa6.11□□□□□ -1.43
TRAFD1-208ENST00000552890 SSBP3-AS1Q7Z2R9 100 aa6.11□□□□□ -1.43
TRAFD1-208ENST00000552890 CEND1Q8N111 149 aa6.11□□□□□ -1.43
TRAFD1-208ENST00000552890 Q9BRP9 147 aa6.1□□□□□ -1.43
TRAFD1-208ENST00000552890 LAMTOR3Q9UHA4 124 aa6.1□□□□□ -1.43
TRAFD1-208ENST00000552890 H0YGX0 51 aa6.09□□□□□ -1.43
TRAFD1-208ENST00000552890 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
TRAFD1-208ENST00000552890 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.43
TRAFD1-208ENST00000552890 TEX49A0A1B0GTD5 131 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 COX6CP09669 75 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 PRO1854Q9UHT4 67 aa6.08□□□□□ -1.44
TRAFD1-208ENST00000552890 A0A087X002 238 aa6.07□□□□□ -1.44
TRAFD1-208ENST00000552890 H3BQ85 93 aa6.07□□□□□ -1.44
TRAFD1-208ENST00000552890 SPRR1BP22528 89 aa6.07□□□□□ -1.44
TRAFD1-208ENST00000552890 C2orf91Q6ZV80 131 aa6.07□□□□□ -1.44
TRAFD1-208ENST00000552890 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 A0A1B0GX51 115 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 TSTD3H0UI37 97 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 M0R143 59 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 SPINK1P00995 79 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 CFC1BP0CG36 223 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 CFC1P0CG37 223 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 Q1RN00 199 aa6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
TRAFD1-208ENST00000552890 hADV29S1A0JD25 119 aa6.05□□□□□ -1.44
TRAFD1-208ENST00000552890 C12orf57Q99622 126 aa6.05□□□□□ -1.44
TRAFD1-208ENST00000552890 F8WEM9 126 aa6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 ERC2-IT1O76042 136 aa6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 LINC00575Q6W349 94 aa6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 Q8NBF4 154 aa6.04□□□□□ -1.44
TRAFD1-208ENST00000552890 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
TRAFD1-208ENST00000552890 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
TRAFD1-208ENST00000552890 ANAPC11Q9NYG5 84 aa6.03□□□□□ -1.44
TRAFD1-208ENST00000552890 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
TRAFD1-208ENST00000552890 IGLV5-48A0A075B6I7 105 aa6.02□□□□□ -1.45
TRAFD1-208ENST00000552890 IGLV9-49A0A0B4J1Y8 123 aa6.02□□□□□ -1.45
TRAFD1-208ENST00000552890 H7C2G1 150 aa6.02□□□□□ -1.45
TRAFD1-208ENST00000552890 MOBPQ13875 183 aa6.01□□□□□ -1.45
TRAFD1-208ENST00000552890 PRO1933Q9H354 126 aa6.01□□□□□ -1.45
TRAFD1-208ENST00000552890 PSMB2P49721 201 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms