RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 SLC25A34Q6PIV7 304 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 C12orf57Q99622 126 aa5.9□□□□□ -1.46
SLC48A1-209ENST00000552003 C14orf144Q96I85 54 aa5.89□□□□□ -1.47
SLC48A1-209ENST00000552003 A0A0U1RRA0 63 aa5.88□□□□□ -1.47
SLC48A1-209ENST00000552003 COPS9Q8WXC6 57 aa5.88□□□□□ -1.47
SLC48A1-209ENST00000552003 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
SLC48A1-209ENST00000552003 VPREB1P12018 145 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 Q6ZVH6 145 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 LINC00518Q8N0U6 118 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 MIR7-3HGQ8N6C7 128 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 UQCR10Q9UDW1 63 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
SLC48A1-209ENST00000552003 FAM168BA1KXE4 195 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 CFC1BP0CG36 223 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 LITAFQ99732 161 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 TP73-AS1Q9UF72 201 aa5.86□□□□□ -1.47
SLC48A1-209ENST00000552003 TSTD3H0UI37 97 aa5.85□□□□□ -1.47
SLC48A1-209ENST00000552003 IFITM1P13164 125 aa5.85□□□□□ -1.47
SLC48A1-209ENST00000552003 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
SLC48A1-209ENST00000552003 DAND5Q8N907 189 aa5.85□□□□□ -1.47
SLC48A1-209ENST00000552003 XAGE1AQ9HD64 81 aa5.85□□□□□ -1.47
SLC48A1-209ENST00000552003 C9orf129Q5T035 196 aaKnown RBP5.84□□□□□ -1.47
SLC48A1-209ENST00000552003 PRO1933Q9H354 126 aa5.84□□□□□ -1.47
SLC48A1-209ENST00000552003 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
SLC48A1-209ENST00000552003 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 LINC00308Q8TCZ7 52 aa5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 HIST1H4GQ99525 98 aa5.83□□□□□ -1.48
SLC48A1-209ENST00000552003 PRYO14603 147 aa5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 NPC2P61916 151 aa5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 TAL2Q16559 108 aa5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 FAM19A5Q7Z5A7 132 aaPredicted RBP5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
SLC48A1-209ENST00000552003 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 NDUFC2O95298 119 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 HSD52Q0P140 79 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
SLC48A1-209ENST00000552003 M0QXV9 152 aa5.8□□□□□ -1.48
SLC48A1-209ENST00000552003 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
SLC48A1-209ENST00000552003 LBHQ53QV2 105 aaPredicted RBP5.8□□□□□ -1.48
SLC48A1-209ENST00000552003 MUSTN1Q8IVN3 82 aa5.8□□□□□ -1.48
SLC48A1-209ENST00000552003 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 M0R378 163 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 NCR3O14931 201 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 CEND1Q8N111 149 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
SLC48A1-209ENST00000552003 ZNF861PO60384 105 aa5.77□□□□□ -1.49
SLC48A1-209ENST00000552003 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
SLC48A1-209ENST00000552003 Q8NDZ9 215 aa5.77□□□□□ -1.49
SLC48A1-209ENST00000552003 DDTP30046 118 aa5.76□□□□□ -1.49
SLC48A1-209ENST00000552003 M0R143 59 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 UBE2BP63146 152 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 CTAG1AP78358 180 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 LINC00167Q96N53 147 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 CBY1Q9Y3M2 126 aa5.75□□□□□ -1.49
SLC48A1-209ENST00000552003 IGKV2-28A0A075B6P5 120 aa5.74□□□□□ -1.49
SLC48A1-209ENST00000552003 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
SLC48A1-209ENST00000552003 IGKV2D-28P01615 120 aa5.74□□□□□ -1.49
SLC48A1-209ENST00000552003 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
SLC48A1-209ENST00000552003 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
SLC48A1-209ENST00000552003 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
SLC48A1-209ENST00000552003 KRTAP4-16G5E9R7 235 aaPredicted RBP5.73□□□□□ -1.49
SLC48A1-209ENST00000552003 FXYD2P54710 66 aa5.73□□□□□ -1.49
SLC48A1-209ENST00000552003 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
SLC48A1-209ENST00000552003 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
SLC48A1-209ENST00000552003 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 A6NDN8 102 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 BVES-AS1Q5T3Y7 98 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 NEBP20929 6669 aa5.72□□□□□ -1.49
SLC48A1-209ENST00000552003 TRAV23DV6A0A075B6W5 121 aa5.71□□□□□ -1.5
SLC48A1-209ENST00000552003 CFC1P0CG37 223 aa5.71□□□□□ -1.5
SLC48A1-209ENST00000552003 HINT1P49773 126 aaPredicted RBP5.71□□□□□ -1.5
SLC48A1-209ENST00000552003 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
SLC48A1-209ENST00000552003 NHP2Q9NX24 153 aaKnown RBP5.71□□□□□ -1.5
SLC48A1-209ENST00000552003 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
SLC48A1-209ENST00000552003 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms