RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 AKAP14Q86UN6 197 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 TIMM17AQ99595 171 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 SMIM27A0A1W2PRY6 76 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 S100A8P05109 93 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 CFC1P0CG37 223 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 LINC00483Q53H64 154 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 Q6ZVH6 145 aa2.85□□□□□ -1.95
HOXB3-213ENST00000552000 FAM240AA0A1B0GVK7 77 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 A0A1B0GXF2 115 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 ADIRFQ15847 76 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 SMIM29Q86T20 159 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 Q8N8P6 123 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 MAP1LC3AQ9H492 121 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.95
HOXB3-213ENST00000552000 ERG28Q9UKR5 140 aa2.84□□□□□ -1.95
HOXB3-213ENST00000552000 ETDCA0A1B0GVM5 59 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 TINCRA0A1B0GVN0 87 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 ERC2-IT1O76042 136 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 SRP19P09132 144 aaKnown RBP2.83□□□□□ -1.96
HOXB3-213ENST00000552000 RPL23P62829 140 aaKnown RBP2.83□□□□□ -1.96
HOXB3-213ENST00000552000 ORMDL2Q53FV1 153 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 C9orf153Q5TBE3 101 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 Q6Q795 121 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 SLC51BQ86UW2 128 aa2.83□□□□□ -1.96
HOXB3-213ENST00000552000 ZNF625Q96I27 306 aaPredicted RBP2.83□□□□□ -1.96
HOXB3-213ENST00000552000 IGLV6-57P01721 117 aa2.82□□□□□ -1.96
HOXB3-213ENST00000552000 G0S2P27469 103 aa2.82□□□□□ -1.96
HOXB3-213ENST00000552000 LAMTOR2Q9Y2Q5 125 aa2.82□□□□□ -1.96
HOXB3-213ENST00000552000 NEBP20929 6669 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 H3BRM9 83 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 ADCYAP1P18509 176 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 SPRR1AP35321 89 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
HOXB3-213ENST00000552000 ALKAL2Q6UX46 152 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 TOMM6Q96B49 74 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 SCGB3A1Q96QR1 104 aa2.81□□□□□ -1.96
HOXB3-213ENST00000552000 TRBV10-3A0A0K0K1G6 114 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 NCR3O14931 201 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 SNAPINO95295 136 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 LINC00158P58513 81 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 COX17Q14061 63 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 ATP5L2Q7Z4Y8 100 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 KCNQ1DNQ9H478 68 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 CST9LQ9H4G1 147 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 NAT8Q9UHE5 227 aa2.8□□□□□ -1.96
HOXB3-213ENST00000552000 K7EMI3 77 aa2.79□□□□□ -1.96
HOXB3-213ENST00000552000 C4orf26Q17RF5 130 aa2.79□□□□□ -1.96
HOXB3-213ENST00000552000 Q9BRP9 147 aa2.79□□□□□ -1.96
HOXB3-213ENST00000552000 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
HOXB3-213ENST00000552000 NXT2Q9NPJ8 142 aaKnown RBP2.79□□□□□ -1.96
HOXB3-213ENST00000552000 TRAV9-1A0A075B6T8 112 aa2.78□□□□□ -1.96
HOXB3-213ENST00000552000 MT2AP02795 61 aa2.78□□□□□ -1.96
HOXB3-213ENST00000552000 PMVKQ15126 192 aa2.78□□□□□ -1.96
HOXB3-213ENST00000552000 NOTCH2NLQ7Z3S9 236 aa2.78□□□□□ -1.96
HOXB3-213ENST00000552000 LOC105371267A0A1B0GV96 52 aa2.77□□□□□ -1.97
HOXB3-213ENST00000552000 C9JQL5 133 aa2.77□□□□□ -1.97
HOXB3-213ENST00000552000 IGLC3P0DOY3 106 aa2.77□□□□□ -1.97
HOXB3-213ENST00000552000 ZNF22P17026 224 aaPredicted RBP2.77□□□□□ -1.97
HOXB3-213ENST00000552000 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
HOXB3-213ENST00000552000 ST20-AS1Q8NBB2 130 aa2.77□□□□□ -1.97
HOXB3-213ENST00000552000 MT1FP04733 61 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 SMIM13P0DJ93 91 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 NDUFA6P56556 154 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 S100A12P80511 92 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 Q6ZRX8 168 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 LINC00846Q9NV44 126 aa2.76□□□□□ -1.97
HOXB3-213ENST00000552000 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 H7C2G1 150 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 CXCL6P80162 114 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 SFTA2Q6UW10 78 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 TCTE3Q8IZS6 198 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 MIR7-3HGQ8N6C7 128 aa2.75□□□□□ -1.97
HOXB3-213ENST00000552000 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 C11orf86A6NJI1 115 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 DDTP30046 118 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 MEIG1Q5JSS6 88 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 C1orf195Q5TG92 126 aa2.74□□□□□ -1.97
HOXB3-213ENST00000552000 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
HOXB3-213ENST00000552000 C20orf202A1L168 122 aa2.73□□□□□ -1.97
HOXB3-213ENST00000552000 NDUFS5O43920 106 aa2.73□□□□□ -1.97
HOXB3-213ENST00000552000 JOSD1Q15040 202 aaPredicted RBP2.73□□□□□ -1.97
HOXB3-213ENST00000552000 PSPHP1O15172 72 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 PEA15Q15121 130 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 COA6Q5JTJ3 125 aaKnown RBP2.72□□□□□ -1.97
HOXB3-213ENST00000552000 ATP11AUNQ6ZP68 121 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 FA2HQ7L5A8 372 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 LITAFQ99732 161 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
HOXB3-213ENST00000552000 LINC01546A6NGU7 62 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms