RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 C2orf88Q9BSF0 95 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 NDUFA13Q9P0J0 144 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 RBM12B-AS1Q9P1G2 102 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 FAM236DA0A1B0GTK5 79 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 ETDCA0A1B0GVM5 59 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 TINCRA0A1B0GVN0 87 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 UMAD1C9J7I0 102 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 K7EMI3 77 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 K7EN84 100 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 PDE6DO43924 150 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 ATP5LO75964 103 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 ATP6V1G2O95670 118 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 FAM236CP0DP71 79 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 DEFA1P59665 94 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 AKR1C8PQ5T2L2 129 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 FAM104BQ5XKR9 115 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 RPL7L1Q6DKI1 246 aaKnown RBP0.99□□□□□ -2.25
PTCH1-223ENST00000551623 SLC25A34Q6PIV7 304 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 FA2HQ7L5A8 372 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 KRTAP8-1Q8IUC2 63 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 ZNF625Q96I27 306 aaPredicted RBP0.99□□□□□ -2.25
PTCH1-223ENST00000551623 PRO1933Q9H354 126 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 MANBALQ9NQG1 85 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 MED9Q9NWA0 146 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 ERG28Q9UKR5 140 aa0.99□□□□□ -2.25
PTCH1-223ENST00000551623 BORCS7-ASMTA0A0B4J1R7 106 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 TRBV10-3A0A0K0K1G6 114 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 TRBV10-2A0A0K0K1G8 114 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 SPRR5A0A1B0GTR4 108 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 HIGD1CA8MV81 97 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 SMKR1H3BMG3 65 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 H7C2G1 150 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 TCL1BO95988 128 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 PPBPP02775 128 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 NDUFA6P56556 154 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 RAB5BP61020 215 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 RAB14P61106 215 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 JOSD1Q15040 202 aaPredicted RBP0.98□□□□□ -2.25
PTCH1-223ENST00000551623 MRPL51Q4U2R6 128 aaKnown RBP0.98□□□□□ -2.25
PTCH1-223ENST00000551623 Q5BKY6 102 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 IGFL1Q6UW32 110 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 CEND1Q8N111 149 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 MTURNQ8N3F0 131 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 KCNRGQ8N5I3 272 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 ENKURQ8TC29 256 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 SFT2D1Q8WV19 159 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 OBSCN-AS1Q96MR7 158 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 CYSLTR1Q9Y271 337 aa0.98□□□□□ -2.25
PTCH1-223ENST00000551623 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
PTCH1-223ENST00000551623 FAM240BA0A1B0GVZ2 78 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 A0A1B0GW15 77 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 NPYP01303 97 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 PFN2P35080 140 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 AKR1D1P51857 326 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 LINC00299Q6ZSB3 139 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 ST20-AS1Q8NBB2 130 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 OCC1Q8TAD7 63 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 BORCS7Q96B45 105 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 VCX2Q9H322 139 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 LAMTOR3Q9UHA4 124 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 LAMTOR2Q9Y2Q5 125 aa0.97□□□□□ -2.25
PTCH1-223ENST00000551623 IGLV5-48A0A075B6I7 105 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 A0A1B0GXF2 115 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 LINC01549A6NIU2 74 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 HMSDA8MTL9 139 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 D6R8Y8 96 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 TMEM250H0YL14 139 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 GATCO43716 136 aaKnown RBP0.96□□□□□ -2.26
PTCH1-223ENST00000551623 RAB5AP20339 215 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 CKS2P33552 79 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 CXCL6P80162 114 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 S100A12P80511 92 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 HRCT1Q6UXD1 115 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 Q8N9L7 120 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 OSTCQ9NRP0 149 aa0.96□□□□□ -2.26
PTCH1-223ENST00000551623 ZNF73O43830 326 aaPredicted RBP0.95□□□□□ -2.26
PTCH1-223ENST00000551623 GIPP09681 153 aaPredicted RBP0.95□□□□□ -2.26
PTCH1-223ENST00000551623 SPINK8P0C7L1 97 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 G0S2P27469 103 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 DDTP30046 118 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 ZNF345Q14585 488 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 ORMDL2Q53FV1 153 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 ERASQ7Z444 233 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 BOD1L2Q8IYS8 172 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 ORMDL3Q8N138 153 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 FAM213BQ8TBF2 198 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 TOMM6Q96B49 74 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 Q96NJ1 140 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 GNG13Q9P2W3 67 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 NAT8BQ9UHF3 227 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 V9GYV3 84 aa0.95□□□□□ -2.26
PTCH1-223ENST00000551623 TEX49A0A1B0GTD5 131 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 LOC389332A0A1B0GUA5 103 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 SMIM27A0A1W2PRY6 76 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 LINC01546A6NGU7 62 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 F8W036 122 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 H3BRM9 83 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 SSNA1O43805 119 aa0.94□□□□□ -2.26
PTCH1-223ENST00000551623 NDUFC2O95298 119 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms