RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
RAB5C-208ENST00000551338 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
RAB5C-208ENST00000551338 CCKP06307 115 aa7.33□□□□□ -1.24
RAB5C-208ENST00000551338 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
RAB5C-208ENST00000551338 B5MCH6 92 aa7.32□□□□□ -1.24
RAB5C-208ENST00000551338 Q6Q795 121 aa7.32□□□□□ -1.24
RAB5C-208ENST00000551338 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
RAB5C-208ENST00000551338 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 TRBV7-7A0A0K0K1E9 115 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 A0A1W2PNN7 141 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 M0R2N4 97 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 Q6ZRX8 168 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 LINC00643Q86TS7 51 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 C9orf163Q8N9P6 203 aa7.31□□□□□ -1.24
RAB5C-208ENST00000551338 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
RAB5C-208ENST00000551338 Q6ZQT0 140 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 Q6ZR54 194 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 Q9BRP9 147 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
RAB5C-208ENST00000551338 ETDCA0A1B0GVM5 59 aa7.29□□□□□ -1.24
RAB5C-208ENST00000551338 GHRHP01286 108 aa7.29□□□□□ -1.24
RAB5C-208ENST00000551338 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
RAB5C-208ENST00000551338 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
RAB5C-208ENST00000551338 REG3GQ6UW15 175 aa7.28□□□□□ -1.24
RAB5C-208ENST00000551338 PKIGQ9Y2B9 76 aa7.28□□□□□ -1.24
RAB5C-208ENST00000551338 TRBV7-4A0A0J9YYF1 115 aa7.27□□□□□ -1.25
RAB5C-208ENST00000551338 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.25
RAB5C-208ENST00000551338 A0A087WTM6 91 aa7.26□□□□□ -1.25
RAB5C-208ENST00000551338 Q6JHZ5 121 aa7.26□□□□□ -1.25
RAB5C-208ENST00000551338 Q8N377 158 aa7.26□□□□□ -1.25
RAB5C-208ENST00000551338 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
RAB5C-208ENST00000551338 PANO1I0J062 215 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 ERC2-IT1O76042 136 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 PDE6GP18545 87 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 KRTAP11-1Q8IUC1 163 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
RAB5C-208ENST00000551338 IGLV5-48A0A075B6I7 105 aa7.23□□□□□ -1.25
RAB5C-208ENST00000551338 UBE2BP63146 152 aa7.23□□□□□ -1.25
RAB5C-208ENST00000551338 ST20-AS1Q8NBB2 130 aa7.23□□□□□ -1.25
RAB5C-208ENST00000551338 DEFB105AQ8NG35 78 aa7.22□□□□□ -1.25
RAB5C-208ENST00000551338 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
RAB5C-208ENST00000551338 PRLHP81277 87 aa7.21□□□□□ -1.26
RAB5C-208ENST00000551338 TNP2Q05952 138 aa7.21□□□□□ -1.26
RAB5C-208ENST00000551338 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.26
RAB5C-208ENST00000551338 VPS13DQ5THJ4 4388 aa7.21□□□□□ -1.26
RAB5C-208ENST00000551338 PLECQ15149 4684 aaKnown RBP7.21□□□□□ -1.26
RAB5C-208ENST00000551338 PRKDCP78527 4128 aaKnown RBP7.2□□□□□ -1.26
RAB5C-208ENST00000551338 SPACA4Q8TDM5 124 aa7.2□□□□□ -1.26
RAB5C-208ENST00000551338 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
RAB5C-208ENST00000551338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
RAB5C-208ENST00000551338 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
RAB5C-208ENST00000551338 EPM2AB3EWF7 344 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 RTL8CO15255 209 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 FUSP35637 526 aaKnown RBP eCLIP7.19□□□□□ -1.26
RAB5C-208ENST00000551338 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
RAB5C-208ENST00000551338 LY6G6CO95867 125 aa7.18□□□□□ -1.26
RAB5C-208ENST00000551338 C1orf134Q5TEV5 83 aa7.18□□□□□ -1.26
RAB5C-208ENST00000551338 ATP5EP2Q5VTU8 51 aa7.18□□□□□ -1.26
RAB5C-208ENST00000551338 UBL5Q9BZL1 73 aa7.18□□□□□ -1.26
RAB5C-208ENST00000551338 CSMD3Q7Z407 3707 aa7.17□□□□□ -1.26
RAB5C-208ENST00000551338 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
RAB5C-208ENST00000551338 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
RAB5C-208ENST00000551338 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
RAB5C-208ENST00000551338 Q6ZVQ6 151 aa7.16□□□□□ -1.26
RAB5C-208ENST00000551338 SMIM29Q86T20 159 aa7.16□□□□□ -1.26
RAB5C-208ENST00000551338 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
RAB5C-208ENST00000551338 H0Y9J4 135 aa7.15□□□□□ -1.26
RAB5C-208ENST00000551338 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
RAB5C-208ENST00000551338 HIGD2AQ9BW72 106 aa7.15□□□□□ -1.26
RAB5C-208ENST00000551338 A0A087WVE0 104 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 IGLV5-52A0A0A0MRZ9 124 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 A0A1W2PNM2 257 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 BCE1O60756 84 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
RAB5C-208ENST00000551338 SPRR1BP22528 89 aa7.11□□□□□ -1.27
RAB5C-208ENST00000551338 UBE2AP49459 152 aa7.11□□□□□ -1.27
RAB5C-208ENST00000551338 LYSTQ99698 3801 aa7.11□□□□□ -1.27
RAB5C-208ENST00000551338 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
RAB5C-208ENST00000551338 Q8NBF4 154 aa7.1□□□□□ -1.27
RAB5C-208ENST00000551338 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
RAB5C-208ENST00000551338 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
RAB5C-208ENST00000551338 DNAH6Q9C0G6 4158 aa7.09□□□□□ -1.27
RAB5C-208ENST00000551338 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
RAB5C-208ENST00000551338 C3orf84H3BNL1 204 aa7.09□□□□□ -1.27
RAB5C-208ENST00000551338 HAMPP81172 84 aa7.09□□□□□ -1.27
RAB5C-208ENST00000551338 DNAH17Q9UFH2 4485 aa7.08□□□□□ -1.28
RAB5C-208ENST00000551338 CXCL6P80162 114 aa7.08□□□□□ -1.28
RAB5C-208ENST00000551338 F8WEM9 126 aa7.07□□□□□ -1.28
RAB5C-208ENST00000551338 CCDC179H3BU77 68 aa7.07□□□□□ -1.28
RAB5C-208ENST00000551338 IGFL1Q6UW32 110 aa7.07□□□□□ -1.28
RAB5C-208ENST00000551338 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
RAB5C-208ENST00000551338 SPRR4Q96PI1 79 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms